RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 KCNA10Q16322 511 aa15.49■□□□□ 0.07
LSM6-204ENST00000504181 CCDC27Q2M243 656 aa15.49■□□□□ 0.07
LSM6-204ENST00000504181 TBC1D9Q6ZT07 1266 aa15.49■□□□□ 0.07
LSM6-204ENST00000504181 METTL16Q86W50 562 aaKnown RBP15.49■□□□□ 0.07
LSM6-204ENST00000504181 NCAPG2Q86XI2 1143 aa15.49■□□□□ 0.07
LSM6-204ENST00000504181 FOXP4Q8IVH2 680 aaPredicted RBP15.49■□□□□ 0.07
LSM6-204ENST00000504181 KCNH6Q9H252 994 aa15.49■□□□□ 0.07
LSM6-204ENST00000504181 RAI14Q9P0K7 980 aa15.49■□□□□ 0.07
LSM6-204ENST00000504181 MOXD2PA6NHM9 499 aa15.48■□□□□ 0.07
LSM6-204ENST00000504181 CDK7P50613 346 aa15.48■□□□□ 0.07
LSM6-204ENST00000504181 PLS1Q14651 629 aa15.48■□□□□ 0.07
LSM6-204ENST00000504181 RAB3GAP1Q15042 981 aa15.48■□□□□ 0.07
LSM6-204ENST00000504181 SHCBP1Q8NEM2 672 aa15.48■□□□□ 0.07
LSM6-204ENST00000504181 ACER1Q8TDN7 264 aa15.48■□□□□ 0.07
LSM6-204ENST00000504181 TGFBRAP1Q8WUH2 860 aa15.48■□□□□ 0.07
LSM6-204ENST00000504181 VTI1AQ96AJ9 217 aa15.48■□□□□ 0.07
LSM6-204ENST00000504181 CDCA7LQ96GN5 454 aa15.48■□□□□ 0.07
LSM6-204ENST00000504181 NOL10Q9BSC4 688 aaKnown RBP15.48■□□□□ 0.07
LSM6-204ENST00000504181 KIAA1683Q9H0B3 1180 aa15.48■□□□□ 0.07
LSM6-204ENST00000504181 SAP30BPQ9UHR5 308 aaKnown RBP15.48■□□□□ 0.07
LSM6-204ENST00000504181 NRBP1Q9UHY1 535 aa15.48■□□□□ 0.07
LSM6-204ENST00000504181 SLC4A7Q9Y6M7 1214 aa15.48■□□□□ 0.07
LSM6-204ENST00000504181 FLT1P17948 1338 aa15.47■□□□□ 0.07
LSM6-204ENST00000504181 MYADML2A6NDP7 307 aa15.47■□□□□ 0.07
LSM6-204ENST00000504181 ZBBXA8MT70 800 aa15.47■□□□□ 0.07
LSM6-204ENST00000504181 TLR3O15455 904 aaKnown RBP15.47■□□□□ 0.07
LSM6-204ENST00000504181 CIAO1O76071 339 aa15.47■□□□□ 0.07
LSM6-204ENST00000504181 CA3P07451 260 aa15.47■□□□□ 0.07
LSM6-204ENST00000504181 SSTR3P32745 418 aaPredicted RBP15.47■□□□□ 0.07
LSM6-204ENST00000504181 DSG3P32926 999 aa15.47■□□□□ 0.07
LSM6-204ENST00000504181 PI16Q6UXB8 463 aa15.47■□□□□ 0.07
LSM6-204ENST00000504181 GJD3Q8N144 294 aa15.47■□□□□ 0.07
LSM6-204ENST00000504181 GLT1D1Q96MS3 346 aa15.47■□□□□ 0.07
LSM6-204ENST00000504181 TINF2Q9BSI4 451 aa15.47■□□□□ 0.07
LSM6-204ENST00000504181 AATFQ9NY61 560 aaKnown RBP eCLIP15.47■□□□□ 0.07
LSM6-204ENST00000504181 SIP14410 1827 aa15.47■□□□□ 0.07
LSM6-204ENST00000504181 ELP1O95163 1332 aa15.46■□□□□ 0.07
LSM6-204ENST00000504181 UMODL1Q5DID0 1318 aa15.46■□□□□ 0.07
LSM6-204ENST00000504181 NAV1Q8NEY1 1877 aa15.46■□□□□ 0.07
LSM6-204ENST00000504181 ZNF865P0CJ78 1059 aaPredicted RBP15.46■□□□□ 0.07
LSM6-204ENST00000504181 ALADP13716 330 aa15.46■□□□□ 0.07
LSM6-204ENST00000504181 TIMM10P62072 90 aa15.46■□□□□ 0.07
LSM6-204ENST00000504181 IRX5P78411 483 aaPredicted RBP15.46■□□□□ 0.07
LSM6-204ENST00000504181 CCSAPQ6IQ19 270 aaPredicted RBP15.46■□□□□ 0.07
LSM6-204ENST00000504181 FAM126BQ8IXS8 530 aa15.46■□□□□ 0.07
LSM6-204ENST00000504181 ABRAQ8N0Z2 381 aa15.46■□□□□ 0.07
LSM6-204ENST00000504181 KLHDC9Q8NEP7 349 aa15.46■□□□□ 0.07
LSM6-204ENST00000504181 ARNTL2Q8WYA1 636 aa15.46■□□□□ 0.07
LSM6-204ENST00000504181 ANKS1AQ92625 1134 aa15.46■□□□□ 0.07
LSM6-204ENST00000504181 MROH8Q9H579 483 aa15.46■□□□□ 0.07
LSM6-204ENST00000504181 A0A0U1RQG5 324 aaPredicted RBP15.45■□□□□ 0.06
LSM6-204ENST00000504181 ARVCFO00192 962 aa15.45■□□□□ 0.06
LSM6-204ENST00000504181 ST18O60284 1047 aa15.45■□□□□ 0.06
LSM6-204ENST00000504181 HLA-DOAP06340 250 aa15.45■□□□□ 0.06
LSM6-204ENST00000504181 PGK2P07205 417 aa15.45■□□□□ 0.06
LSM6-204ENST00000504181 FCER1AP12319 257 aa15.45■□□□□ 0.06
LSM6-204ENST00000504181 ATP2A2P16615 1042 aaKnown RBP15.45■□□□□ 0.06
LSM6-204ENST00000504181 COG2Q14746 738 aa15.45■□□□□ 0.06
LSM6-204ENST00000504181 TMEM67Q5HYA8 995 aa15.45■□□□□ 0.06
LSM6-204ENST00000504181 FAM178BQ8IXR5 827 aa15.45■□□□□ 0.06
LSM6-204ENST00000504181 TANGO6Q9C0B7 1094 aa15.45■□□□□ 0.06
LSM6-204ENST00000504181 USP44Q9H0E7 712 aa15.45■□□□□ 0.06
LSM6-204ENST00000504181 HMG20BQ9P0W2 317 aa15.45■□□□□ 0.06
LSM6-204ENST00000504181 FBXO3Q9UK99 471 aa15.45■□□□□ 0.06
LSM6-204ENST00000504181 TANC1Q9C0D5 1861 aa15.45■□□□□ 0.06
LSM6-204ENST00000504181 ASGR1P07306 291 aa15.44■□□□□ 0.06
LSM6-204ENST00000504181 CCL23P55773 120 aa15.44■□□□□ 0.06
LSM6-204ENST00000504181 HIPK3Q9H422 1215 aa15.44■□□□□ 0.06
LSM6-204ENST00000504181 HOXC10Q9NYD6 342 aa15.44■□□□□ 0.06
LSM6-204ENST00000504181 PA2G4Q9UQ80 394 aaKnown RBP15.44■□□□□ 0.06
LSM6-204ENST00000504181 C5orf42Q9H799 3197 aa15.44■□□□□ 0.06
LSM6-204ENST00000504181 KMT2EQ8IZD2 1858 aa15.44■□□□□ 0.06
LSM6-204ENST00000504181 C6orf222P0C671 652 aaPredicted RBP15.43■□□□□ 0.06
LSM6-204ENST00000504181 IL15P40933 162 aaPredicted RBP15.43■□□□□ 0.06
LSM6-204ENST00000504181 ATF7IPQ6VMQ6 1270 aa15.43■□□□□ 0.06
LSM6-204ENST00000504181 SPATA5Q8NB90 893 aa15.43■□□□□ 0.06
LSM6-204ENST00000504181 XAGE2Q96GT9 111 aa15.43■□□□□ 0.06
LSM6-204ENST00000504181 MMP19Q99542 508 aa15.43■□□□□ 0.06
LSM6-204ENST00000504181 A0A1B0GUL7 405 aa15.42■□□□□ 0.06
LSM6-204ENST00000504181 ARHGEF15O94989 841 aa15.42■□□□□ 0.06
LSM6-204ENST00000504181 BAG3O95817 575 aa15.42■□□□□ 0.06
LSM6-204ENST00000504181 CD4P01730 458 aa15.42■□□□□ 0.06
LSM6-204ENST00000504181 PLCG2P16885 1265 aa15.42■□□□□ 0.06
LSM6-204ENST00000504181 GRB10Q13322 594 aa15.42■□□□□ 0.06
LSM6-204ENST00000504181 TET1Q8NFU7 2136 aa15.42■□□□□ 0.06
LSM6-204ENST00000504181 LRP2BPQ9P2M1 347 aa15.42■□□□□ 0.06
LSM6-204ENST00000504181 CNPY2Q9Y2B0 182 aa15.42■□□□□ 0.06
LSM6-204ENST00000504181 IL9P15248 144 aa15.41■□□□□ 0.06
LSM6-204ENST00000504181 FOXK2Q01167 660 aa15.41■□□□□ 0.06
LSM6-204ENST00000504181 MVPQ14764 893 aaKnown RBP15.41■□□□□ 0.06
LSM6-204ENST00000504181 ABCB5Q2M3G0 1257 aa15.41■□□□□ 0.06
LSM6-204ENST00000504181 ZNF792Q3KQV3 632 aa15.41■□□□□ 0.06
LSM6-204ENST00000504181 TATDN1Q6P1N9 297 aa15.41■□□□□ 0.06
LSM6-204ENST00000504181 PCSK9Q8NBP7 692 aaKnown RBP15.41■□□□□ 0.06
LSM6-204ENST00000504181 WNT8AQ9H1J5 351 aa15.41■□□□□ 0.06
LSM6-204ENST00000504181 FAM184BQ9ULE4 1060 aa15.41■□□□□ 0.06
LSM6-204ENST00000504181 TRIP12Q14669 1992 aaPredicted RBP15.41■□□□□ 0.06
LSM6-204ENST00000504181 DCXO43602 365 aa15.4■□□□□ 0.06
LSM6-204ENST00000504181 CST5P28325 142 aaPredicted RBP15.4■□□□□ 0.06
LSM6-204ENST00000504181 TAP1Q03518 808 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms