RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 SH2B1Q9NRF2 756 aaPredicted RBP3.19□□□□□ -1.9
NEDD4-204ENST00000503468 SYCE3A1L190 88 aa3.19□□□□□ -1.9
NEDD4-204ENST00000503468 NPIPB8E9PQR5 432 aa3.19□□□□□ -1.9
NEDD4-204ENST00000503468 TP73O15350 636 aa3.19□□□□□ -1.9
NEDD4-204ENST00000503468 ZSCAN12O43309 604 aa3.19□□□□□ -1.9
NEDD4-204ENST00000503468 WDHD1O75717 1129 aaPredicted RBP3.19□□□□□ -1.9
NEDD4-204ENST00000503468 RWDD2BP57060 319 aa3.19□□□□□ -1.9
NEDD4-204ENST00000503468 TGFB2P61812 414 aa3.19□□□□□ -1.9
NEDD4-204ENST00000503468 FRG1Q14331 258 aaKnown RBP3.19□□□□□ -1.9
NEDD4-204ENST00000503468 MAMDC4Q6UXC1 1216 aa3.19□□□□□ -1.9
NEDD4-204ENST00000503468 MICALCLQ6ZW33 695 aa3.19□□□□□ -1.9
NEDD4-204ENST00000503468 SRLQ86TD4 932 aa3.19□□□□□ -1.9
NEDD4-204ENST00000503468 CCDC150Q8NCX0 1101 aa3.19□□□□□ -1.9
NEDD4-204ENST00000503468 NSUN4Q96CB9 384 aaKnown RBP3.19□□□□□ -1.9
NEDD4-204ENST00000503468 TMEM59LQ9UK28 342 aa3.19□□□□□ -1.9
NEDD4-204ENST00000503468 TMX2Q9Y320 296 aa3.19□□□□□ -1.9
NEDD4-204ENST00000503468 GOLGA6L10A6NI86 522 aa3.19□□□□□ -1.9
NEDD4-204ENST00000503468 BECN2A8MW95 431 aa3.19□□□□□ -1.9
NEDD4-204ENST00000503468 GOLIM4O00461 696 aa3.19□□□□□ -1.9
NEDD4-204ENST00000503468 IKBKBO14920 756 aa3.19□□□□□ -1.9
NEDD4-204ENST00000503468 CHUKO15111 745 aa3.19□□□□□ -1.9
NEDD4-204ENST00000503468 SMC2O95347 1197 aa3.19□□□□□ -1.9
NEDD4-204ENST00000503468 ADAMTS2O95450 1211 aa3.19□□□□□ -1.9
NEDD4-204ENST00000503468 ETF1P62495 437 aaKnown RBP3.19□□□□□ -1.9
NEDD4-204ENST00000503468 KRT85P78386 507 aa3.19□□□□□ -1.9
NEDD4-204ENST00000503468 RESTQ13127 1097 aa3.19□□□□□ -1.9
NEDD4-204ENST00000503468 KCNB1Q14721 858 aa3.19□□□□□ -1.9
NEDD4-204ENST00000503468 ATP2B3Q16720 1220 aa3.19□□□□□ -1.9
NEDD4-204ENST00000503468 MAP9Q49MG5 647 aa3.19□□□□□ -1.9
NEDD4-204ENST00000503468 NAALADL2Q58DX5 795 aa3.19□□□□□ -1.9
NEDD4-204ENST00000503468 TAX1BP1Q86VP1 789 aa3.19□□□□□ -1.9
NEDD4-204ENST00000503468 RASEFQ8IZ41 740 aa3.19□□□□□ -1.9
NEDD4-204ENST00000503468 ZSCAN31Q96LW9 406 aaPredicted RBP3.19□□□□□ -1.9
NEDD4-204ENST00000503468 FAM83CQ9BQN1 747 aa3.19□□□□□ -1.9
NEDD4-204ENST00000503468 RNF26Q9BY78 433 aaPredicted RBP3.19□□□□□ -1.9
NEDD4-204ENST00000503468 CD248Q9HCU0 757 aa3.19□□□□□ -1.9
NEDD4-204ENST00000503468 IMPACTQ9P2X3 320 aa3.19□□□□□ -1.9
NEDD4-204ENST00000503468 GTF3C5Q9Y5Q8 519 aaPredicted RBP3.19□□□□□ -1.9
NEDD4-204ENST00000503468 MAST3O60307 1309 aa3.19□□□□□ -1.9
NEDD4-204ENST00000503468 PPFIA4O75335 1185 aa3.19□□□□□ -1.9
NEDD4-204ENST00000503468 BCAR3O75815 825 aa3.19□□□□□ -1.9
NEDD4-204ENST00000503468 CPP00450 1065 aa3.19□□□□□ -1.9
NEDD4-204ENST00000503468 ATP2B1P20020 1258 aa3.19□□□□□ -1.9
NEDD4-204ENST00000503468 HNRNPH2P55795 449 aaKnown RBP3.19□□□□□ -1.9
NEDD4-204ENST00000503468 CCDC93Q567U6 631 aa3.19□□□□□ -1.9
NEDD4-204ENST00000503468 FAM196AQ6ZSG2 479 aa3.19□□□□□ -1.9
NEDD4-204ENST00000503468 CYS1Q717R9 158 aa3.19□□□□□ -1.9
NEDD4-204ENST00000503468 ANKRD18AQ8IVF6 992 aa3.19□□□□□ -1.9
NEDD4-204ENST00000503468 RNF214Q8ND24 703 aa3.19□□□□□ -1.9
NEDD4-204ENST00000503468 P3H4Q92791 437 aa3.19□□□□□ -1.9
NEDD4-204ENST00000503468 CXorf56Q9H5V9 222 aa3.19□□□□□ -1.9
NEDD4-204ENST00000503468 RTEL1Q9NZ71 1219 aa3.19□□□□□ -1.9
NEDD4-204ENST00000503468 SMCHD1A6NHR9 2005 aa3.19□□□□□ -1.9
NEDD4-204ENST00000503468 FANCMQ8IYD8 2048 aa3.19□□□□□ -1.9
NEDD4-204ENST00000503468 EBAG9O00559 213 aa3.18□□□□□ -1.9
NEDD4-204ENST00000503468 SRGAP3O43295 1099 aa3.18□□□□□ -1.9
NEDD4-204ENST00000503468 RPS12P25398 132 aaKnown RBP3.18□□□□□ -1.9
NEDD4-204ENST00000503468 ARHGAP25P42331 645 aa3.18□□□□□ -1.9
NEDD4-204ENST00000503468 CUL4BQ13620 913 aa3.18□□□□□ -1.9
NEDD4-204ENST00000503468 TRIM72Q6ZMU5 477 aa3.18□□□□□ -1.9
NEDD4-204ENST00000503468 RNF165Q6ZSG1 346 aa3.18□□□□□ -1.9
NEDD4-204ENST00000503468 PODNQ7Z5L7 613 aa3.18□□□□□ -1.9
NEDD4-204ENST00000503468 AGBL3Q8NEM8 1001 aa3.18□□□□□ -1.9
NEDD4-204ENST00000503468 DIS3Q9Y2L1 958 aaKnown RBP3.18□□□□□ -1.9
NEDD4-204ENST00000503468 MRVI1Q9Y6F6 885 aa3.18□□□□□ -1.9
NEDD4-204ENST00000503468 DOCK4Q8N1I0 1966 aa3.18□□□□□ -1.9
NEDD4-204ENST00000503468 GSG1L2A8MUP6 293 aa3.18□□□□□ -1.9
NEDD4-204ENST00000503468 KLRC4O43908 158 aa3.18□□□□□ -1.9
NEDD4-204ENST00000503468 CYP21A2P08686 494 aa3.18□□□□□ -1.9
NEDD4-204ENST00000503468 CDC25BP30305 580 aa3.18□□□□□ -1.9
NEDD4-204ENST00000503468 PRKCIP41743 596 aa3.18□□□□□ -1.9
NEDD4-204ENST00000503468 TARBP2Q15633 366 aaKnown RBP3.18□□□□□ -1.9
NEDD4-204ENST00000503468 PDCD2Q16342 344 aaPredicted RBP3.18□□□□□ -1.9
NEDD4-204ENST00000503468 FXNQ16595 210 aa3.18□□□□□ -1.9
NEDD4-204ENST00000503468 TPD52L1Q16890 204 aaPredicted RBP3.18□□□□□ -1.9
NEDD4-204ENST00000503468 EFHC2Q5JST6 749 aa3.18□□□□□ -1.9
NEDD4-204ENST00000503468 CCSAPQ6IQ19 270 aaPredicted RBP3.18□□□□□ -1.9
NEDD4-204ENST00000503468 RASGRP2Q7LDG7 609 aa3.18□□□□□ -1.9
NEDD4-204ENST00000503468 TRIML1Q8N9V2 468 aa3.18□□□□□ -1.9
NEDD4-204ENST00000503468 CTCFLQ8NI51 663 aaPredicted RBP3.18□□□□□ -1.9
NEDD4-204ENST00000503468 RABGGTAQ92696 567 aa3.18□□□□□ -1.9
NEDD4-204ENST00000503468 MOV10L1Q9BXT6 1211 aaKnown RBP3.18□□□□□ -1.9
NEDD4-204ENST00000503468 TRIM5Q9C035 493 aa3.18□□□□□ -1.9
NEDD4-204ENST00000503468 VEZTQ9HBM0 779 aa3.18□□□□□ -1.9
NEDD4-204ENST00000503468 RBM27Q9P2N5 1060 aaKnown RBP3.18□□□□□ -1.9
NEDD4-204ENST00000503468 MTMR6Q9Y217 621 aa3.18□□□□□ -1.9
NEDD4-204ENST00000503468 U3KPZ7 1027 aaPredicted RBP3.18□□□□□ -1.9
NEDD4-204ENST00000503468 NUP210LQ5VU65 1888 aa3.18□□□□□ -1.9
NEDD4-204ENST00000503468 IGLV3-22A0A075B6J6 115 aa3.18□□□□□ -1.9
NEDD4-204ENST00000503468 EFCAB8A8MWE9 144 aa3.18□□□□□ -1.9
NEDD4-204ENST00000503468 IPO7O95373 1038 aaKnown RBP3.18□□□□□ -1.9
NEDD4-204ENST00000503468 SCNN1AP37088 669 aa3.18□□□□□ -1.9
NEDD4-204ENST00000503468 MNAT1P51948 309 aa3.18□□□□□ -1.9
NEDD4-204ENST00000503468 GBP6Q6ZN66 633 aa3.18□□□□□ -1.9
NEDD4-204ENST00000503468 CACTIN-AS1Q8N1I8 211 aa3.18□□□□□ -1.9
NEDD4-204ENST00000503468 GPR161Q8N6U8 529 aaKnown RBP3.18□□□□□ -1.9
NEDD4-204ENST00000503468 NKX2-3Q8TAU0 364 aa3.18□□□□□ -1.9
NEDD4-204ENST00000503468 TCP11Q8WWU5 503 aa3.18□□□□□ -1.9
NEDD4-204ENST00000503468 OSBPL9Q96SU4 736 aa3.18□□□□□ -1.9
NEDD4-204ENST00000503468 MTRQ99707 1265 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms