RNA–Protein interactions for RNA: ENST00000502987.5

SNCA-207, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 731 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-207ENST00000502987 MAP3K21Q5TCX8 1036 aa12.9□□□□□ -0.34
SNCA-207ENST00000502987 C20orf194Q5TEA3 1177 aa12.9□□□□□ -0.34
SNCA-207ENST00000502987 SH2D4AQ9H788 454 aa12.9□□□□□ -0.34
SNCA-207ENST00000502987 RANBP2P49792 3224 aaKnown RBP12.89□□□□□ -0.35
SNCA-207ENST00000502987 AKR1B1P15121 316 aa12.89□□□□□ -0.35
SNCA-207ENST00000502987 SYN1P17600 705 aa12.89□□□□□ -0.35
SNCA-207ENST00000502987 CDK8P49336 464 aa12.89□□□□□ -0.35
SNCA-207ENST00000502987 ICA1Q05084 483 aa12.89□□□□□ -0.35
SNCA-207ENST00000502987 UBE3CQ15386 1083 aa12.89□□□□□ -0.35
SNCA-207ENST00000502987 C12orf60Q5U649 245 aa12.89□□□□□ -0.35
SNCA-207ENST00000502987 LBX2Q6XYB7 198 aa12.89□□□□□ -0.35
SNCA-207ENST00000502987 SPICE1Q8N0Z3 855 aa12.89□□□□□ -0.35
SNCA-207ENST00000502987 STK11IPQ8N1F8 1099 aa12.89□□□□□ -0.35
SNCA-207ENST00000502987 GPATCH3Q96I76 525 aa12.89□□□□□ -0.35
SNCA-207ENST00000502987 CCDC17Q96LX7 622 aa12.89□□□□□ -0.35
SNCA-207ENST00000502987 FLOT1O75955 427 aa12.88□□□□□ -0.35
SNCA-207ENST00000502987 CHGBP05060 677 aa12.88□□□□□ -0.35
SNCA-207ENST00000502987 NCAPG2Q86XI2 1143 aa12.88□□□□□ -0.35
SNCA-207ENST00000502987 CLEC10AQ8IUN9 316 aa12.88□□□□□ -0.35
SNCA-207ENST00000502987 MOV10L1Q9BXT6 1211 aaKnown RBP12.88□□□□□ -0.35
SNCA-207ENST00000502987 ECHDC1Q9NTX5 307 aa12.88□□□□□ -0.35
SNCA-207ENST00000502987 FLRT1Q9NZU1 646 aa12.88□□□□□ -0.35
SNCA-207ENST00000502987 ZNFX1Q9P2E3 1918 aaKnown RBP12.88□□□□□ -0.35
SNCA-207ENST00000502987 STRNO43815 780 aa12.87□□□□□ -0.35
SNCA-207ENST00000502987 CYP2C19P33261 490 aa12.87□□□□□ -0.35
SNCA-207ENST00000502987 GRB14Q14449 540 aa12.87□□□□□ -0.35
SNCA-207ENST00000502987 KIAA1755Q5JYT7 1200 aa12.87□□□□□ -0.35
SNCA-207ENST00000502987 NPLOC4Q8TAT6 608 aa12.87□□□□□ -0.35
SNCA-207ENST00000502987 LPAR1Q92633 364 aa12.87□□□□□ -0.35
SNCA-207ENST00000502987 SPATC1LQ9H0A9 340 aa12.87□□□□□ -0.35
SNCA-207ENST00000502987 PUS7LQ9H0K6 701 aaKnown RBP12.87□□□□□ -0.35
SNCA-207ENST00000502987 MKNK2Q9HBH9 465 aa12.87□□□□□ -0.35
SNCA-207ENST00000502987 SLC5A4Q9NY91 659 aa12.87□□□□□ -0.35
SNCA-207ENST00000502987 TMX2Q9Y320 296 aa12.87□□□□□ -0.35
SNCA-207ENST00000502987 SZT2Q5T011 3432 aa12.87□□□□□ -0.35
SNCA-207ENST00000502987 A0A1W2PPC1 479 aa12.86□□□□□ -0.35
SNCA-207ENST00000502987 MINDY4BA8MYZ0 360 aa12.86□□□□□ -0.35
SNCA-207ENST00000502987 SMIM22K7EJ46 135 aa12.86□□□□□ -0.35
SNCA-207ENST00000502987 EEF2P13639 858 aaKnown RBP12.86□□□□□ -0.35
SNCA-207ENST00000502987 ERCC3P19447 782 aa12.86□□□□□ -0.35
SNCA-207ENST00000502987 ADORA2AP29274 412 aa12.86□□□□□ -0.35
SNCA-207ENST00000502987 CTR9Q6PD62 1173 aa12.86□□□□□ -0.35
SNCA-207ENST00000502987 C16orf86Q6ZW13 317 aa12.86□□□□□ -0.35
SNCA-207ENST00000502987 MB21D1Q8N884 522 aa12.86□□□□□ -0.35
SNCA-207ENST00000502987 ATG4CQ96DT6 458 aa12.86□□□□□ -0.35
SNCA-207ENST00000502987 SENP6Q9GZR1 1112 aaPredicted RBP12.86□□□□□ -0.35
SNCA-207ENST00000502987 PRO3102Q9H379 93 aa12.86□□□□□ -0.35
SNCA-207ENST00000502987 VCPKMTQ9H867 229 aa12.86□□□□□ -0.35
SNCA-207ENST00000502987 KANSL2Q9H9L4 492 aa12.86□□□□□ -0.35
SNCA-207ENST00000502987 GOPCQ9HD26 462 aa12.86□□□□□ -0.35
SNCA-207ENST00000502987 WDR46O15213 610 aaKnown RBP12.85□□□□□ -0.35
SNCA-207ENST00000502987 MSCO60682 206 aa12.85□□□□□ -0.35
SNCA-207ENST00000502987 APPP05067 770 aa12.85□□□□□ -0.35
SNCA-207ENST00000502987 HOXC6P09630 235 aa12.85□□□□□ -0.35
SNCA-207ENST00000502987 TSHZ3Q63HK5 1081 aa12.85□□□□□ -0.35
SNCA-207ENST00000502987 SIAH1Q8IUQ4 282 aa12.85□□□□□ -0.35
SNCA-207ENST00000502987 SHCBP1Q8NEM2 672 aa12.85□□□□□ -0.35
SNCA-207ENST00000502987 MROH8Q9H579 483 aa12.85□□□□□ -0.35
SNCA-207ENST00000502987 DDX20Q9UHI6 824 aaKnown RBP12.85□□□□□ -0.35
SNCA-207ENST00000502987 COL11A1P12107 1806 aaPredicted RBP12.85□□□□□ -0.35
SNCA-207ENST00000502987 FRMPD3Q5JV73 1810 aa12.85□□□□□ -0.35
SNCA-207ENST00000502987 PFASO15067 1338 aa12.85□□□□□ -0.35
SNCA-207ENST00000502987 FCER1AP12319 257 aa12.84□□□□□ -0.35
SNCA-207ENST00000502987 MAGEA10P43363 369 aaPredicted RBP12.84□□□□□ -0.35
SNCA-207ENST00000502987 LRRC26Q2I0M4 334 aa12.84□□□□□ -0.35
SNCA-207ENST00000502987 ANO1Q5XXA6 986 aa12.84□□□□□ -0.35
SNCA-207ENST00000502987 KBTBD3Q8NAB2 608 aa12.84□□□□□ -0.35
SNCA-207ENST00000502987 STRBPQ96SI9 672 aaKnown RBP12.84□□□□□ -0.35
SNCA-207ENST00000502987 GDF15Q99988 308 aa12.84□□□□□ -0.35
SNCA-207ENST00000502987 UBE2OQ9C0C9 1292 aaKnown RBP12.84□□□□□ -0.35
SNCA-207ENST00000502987 DCTPP1Q9H773 170 aa12.84□□□□□ -0.35
SNCA-207ENST00000502987 ARPP21Q9UBL0 812 aaPredicted RBP12.84□□□□□ -0.35
SNCA-207ENST00000502987 RLFQ13129 1914 aa12.84□□□□□ -0.35
SNCA-207ENST00000502987 RNF113AO15541 343 aaKnown RBP12.83□□□□□ -0.36
SNCA-207ENST00000502987 SLC25A27O95847 323 aa12.83□□□□□ -0.36
SNCA-207ENST00000502987 BMP8BP34820 402 aa12.83□□□□□ -0.36
SNCA-207ENST00000502987 SLC4A3P48751 1232 aa12.83□□□□□ -0.36
SNCA-207ENST00000502987 TDO2P48775 406 aa12.83□□□□□ -0.36
SNCA-207ENST00000502987 LRRFIP1Q32MZ4 808 aaKnown RBP12.83□□□□□ -0.36
SNCA-207ENST00000502987 ZNF444Q8N0Y2 327 aaPredicted RBP12.83□□□□□ -0.36
SNCA-207ENST00000502987 ARRDC4Q8NCT1 418 aa12.83□□□□□ -0.36
SNCA-207ENST00000502987 LBHD1Q9BQE6 289 aaPredicted RBP12.83□□□□□ -0.36
SNCA-207ENST00000502987 FBXO28Q9NVF7 368 aa12.83□□□□□ -0.36
SNCA-207ENST00000502987 CTDP1Q9Y5B0 961 aaPredicted RBP12.83□□□□□ -0.36
SNCA-207ENST00000502987 GSG1L2A8MUP6 293 aa12.82□□□□□ -0.36
SNCA-207ENST00000502987 KBTBD13C9JR72 458 aa12.82□□□□□ -0.36
SNCA-207ENST00000502987 COBLO75128 1261 aa12.82□□□□□ -0.36
SNCA-207ENST00000502987 ZFYP08048 801 aaPredicted RBP12.82□□□□□ -0.36
SNCA-207ENST00000502987 COL6A1P12109 1028 aa12.82□□□□□ -0.36
SNCA-207ENST00000502987 MDM2Q00987 491 aaPredicted RBP12.82□□□□□ -0.36
SNCA-207ENST00000502987 TMEM132BQ14DG7 1078 aa12.82□□□□□ -0.36
SNCA-207ENST00000502987 PRAMEF19Q5SWL8 479 aa12.82□□□□□ -0.36
SNCA-207ENST00000502987 FAM83BQ5T0W9 1011 aa12.82□□□□□ -0.36
SNCA-207ENST00000502987 GJC2Q5T442 439 aaPredicted RBP12.82□□□□□ -0.36
SNCA-207ENST00000502987 OLFML2BQ68BL8 750 aa12.82□□□□□ -0.36
SNCA-207ENST00000502987 TRPV1Q8NER1 839 aa12.82□□□□□ -0.36
SNCA-207ENST00000502987 APPBP2Q92624 585 aa12.82□□□□□ -0.36
SNCA-207ENST00000502987 OSBP2Q969R2 916 aa12.82□□□□□ -0.36
SNCA-207ENST00000502987 LRCH3Q96II8 777 aa12.82□□□□□ -0.36
SNCA-207ENST00000502987 MMP19Q99542 508 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms