RNA–Protein interactions for RNA: ENST00000502955.5

DDR1-247, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 574 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-247ENST00000502955 MUC3AQ02505 3323 aa16.58■□□□□ 0.24
DDR1-247ENST00000502955 BAZ2AQ9UIF9 1905 aaKnown RBP16.57■□□□□ 0.24
DDR1-247ENST00000502955 SPICE1Q8N0Z3 855 aa16.57■□□□□ 0.24
DDR1-247ENST00000502955 KIF1BPQ96EK5 621 aa16.57■□□□□ 0.24
DDR1-247ENST00000502955 DYNLL2Q96FJ2 89 aa16.57■□□□□ 0.24
DDR1-247ENST00000502955 PLXNA1Q9UIW2 1896 aa16.56■□□□□ 0.24
DDR1-247ENST00000502955 TMEM265A0A087WTH1 108 aa16.56■□□□□ 0.24
DDR1-247ENST00000502955 RARBP10826 455 aa16.56■□□□□ 0.24
DDR1-247ENST00000502955 ADD2P35612 726 aa16.56■□□□□ 0.24
DDR1-247ENST00000502955 C12orf60Q5U649 245 aa16.56■□□□□ 0.24
DDR1-247ENST00000502955 C16orf86Q6ZW13 317 aa16.56■□□□□ 0.24
DDR1-247ENST00000502955 SH3RF1Q7Z6J0 888 aa16.56■□□□□ 0.24
DDR1-247ENST00000502955 RIOX2Q8IUF8 465 aa16.56■□□□□ 0.24
DDR1-247ENST00000502955 CLEC10AQ8IUN9 316 aa16.56■□□□□ 0.24
DDR1-247ENST00000502955 DNAJC2Q99543 621 aaKnown RBP16.56■□□□□ 0.24
DDR1-247ENST00000502955 TINF2Q9BSI4 451 aa16.56■□□□□ 0.24
DDR1-247ENST00000502955 ARMT1Q9H993 441 aa16.56■□□□□ 0.24
DDR1-247ENST00000502955 XPNPEP3Q9NQH7 507 aa16.56■□□□□ 0.24
DDR1-247ENST00000502955 TACC3Q9Y6A5 838 aa16.56■□□□□ 0.24
DDR1-247ENST00000502955 IFIT2P09913 472 aaKnown RBP16.55■□□□□ 0.24
DDR1-247ENST00000502955 COPB2P35606 906 aa16.55■□□□□ 0.24
DDR1-247ENST00000502955 CDK8P49336 464 aa16.55■□□□□ 0.24
DDR1-247ENST00000502955 TLE2Q04725 743 aa16.55■□□□□ 0.24
DDR1-247ENST00000502955 ZNF792Q3KQV3 632 aa16.55■□□□□ 0.24
DDR1-247ENST00000502955 RNF180Q86T96 592 aa16.55■□□□□ 0.24
DDR1-247ENST00000502955 FERMT2Q96AC1 680 aa16.55■□□□□ 0.24
DDR1-247ENST00000502955 MMP19Q99542 508 aa16.55■□□□□ 0.24
DDR1-247ENST00000502955 TTYH1Q9H313 450 aaPredicted RBP16.55■□□□□ 0.24
DDR1-247ENST00000502955 KANSL2Q9H9L4 492 aa16.55■□□□□ 0.24
DDR1-247ENST00000502955 ZBED9Q6R2W3 1325 aa16.54■□□□□ 0.24
DDR1-247ENST00000502955 VWA5AO00534 786 aa16.54■□□□□ 0.24
DDR1-247ENST00000502955 KIAA0355O15063 1070 aa16.54■□□□□ 0.24
DDR1-247ENST00000502955 PRKAB2O43741 272 aa16.54■□□□□ 0.24
DDR1-247ENST00000502955 MBD4O95243 580 aa16.54■□□□□ 0.24
DDR1-247ENST00000502955 MYCNP04198 464 aaPredicted RBP16.54■□□□□ 0.24
DDR1-247ENST00000502955 CLTBP09497 229 aa16.54■□□□□ 0.24
DDR1-247ENST00000502955 KCTD2Q14681 263 aa16.54■□□□□ 0.24
DDR1-247ENST00000502955 RPAP2Q8IXW5 612 aaPredicted RBP16.54■□□□□ 0.24
DDR1-247ENST00000502955 AMOTL1Q8IY63 956 aa16.54■□□□□ 0.24
DDR1-247ENST00000502955 REPS2Q8NFH8 660 aa16.54■□□□□ 0.24
DDR1-247ENST00000502955 MAFAQ8NHW3 353 aaPredicted RBP16.54■□□□□ 0.24
DDR1-247ENST00000502955 PAG1Q9NWQ8 432 aa16.54■□□□□ 0.24
DDR1-247ENST00000502955 ZNF214Q9UL59 606 aaPredicted RBP16.54■□□□□ 0.24
DDR1-247ENST00000502955 GREB1LQ9C091 1923 aaPredicted RBP16.53■□□□□ 0.24
DDR1-247ENST00000502955 A0A1W2PQ45 241 aaPredicted RBP16.53■□□□□ 0.24
DDR1-247ENST00000502955 A0A1W2PQY0 241 aa16.53■□□□□ 0.24
DDR1-247ENST00000502955 ZNF865P0CJ78 1059 aaPredicted RBP16.53■□□□□ 0.24
DDR1-247ENST00000502955 EEF2P13639 858 aaKnown RBP16.53■□□□□ 0.24
DDR1-247ENST00000502955 ITGB8P26012 769 aa16.53■□□□□ 0.24
DDR1-247ENST00000502955 STAT3P40763 770 aa16.53■□□□□ 0.24
DDR1-247ENST00000502955 UBE3CQ15386 1083 aa16.53■□□□□ 0.24
DDR1-247ENST00000502955 MSL3Q8N5Y2 521 aaKnown RBP16.53■□□□□ 0.24
DDR1-247ENST00000502955 TOX2Q96NM4 488 aa16.53■□□□□ 0.24
DDR1-247ENST00000502955 TSEN34Q9BSV6 310 aaKnown RBP16.53■□□□□ 0.24
DDR1-247ENST00000502955 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.53■□□□□ 0.241e-8■■■■■ 50
DDR1-247ENST00000502955 GOPCQ9HD26 462 aa16.53■□□□□ 0.24
DDR1-247ENST00000502955 FBXO28Q9NVF7 368 aa16.53■□□□□ 0.24
DDR1-247ENST00000502955 PPP1R9AQ9ULJ8 1098 aa16.53■□□□□ 0.24
DDR1-247ENST00000502955 MYH7P12883 1935 aa16.53■□□□□ 0.24
DDR1-247ENST00000502955 USP17L12C9JPN9 530 aa16.52■□□□□ 0.24
DDR1-247ENST00000502955 USP17L21D6R901 530 aa16.52■□□□□ 0.24
DDR1-247ENST00000502955 SMIM22K7EJ46 135 aa16.52■□□□□ 0.24
DDR1-247ENST00000502955 RAB11FIP3O75154 756 aa16.52■□□□□ 0.24
DDR1-247ENST00000502955 ADAMTS4O75173 837 aa16.52■□□□□ 0.24
DDR1-247ENST00000502955 PGK2P07205 417 aa16.52■□□□□ 0.24
DDR1-247ENST00000502955 AKR1A1P14550 325 aa16.52■□□□□ 0.24
DDR1-247ENST00000502955 ATP5JP18859 108 aa16.52■□□□□ 0.24
DDR1-247ENST00000502955 ANKRD33Q7Z3H0 272 aa16.52■□□□□ 0.24
DDR1-247ENST00000502955 PANK1Q8TE04 598 aa16.52■□□□□ 0.24
DDR1-247ENST00000502955 CYP2D7A0A087X1C5 515 aa16.51■□□□□ 0.23
DDR1-247ENST00000502955 HMMRO75330 724 aa16.51■□□□□ 0.23
DDR1-247ENST00000502955 PGK1P00558 417 aa16.51■□□□□ 0.23
DDR1-247ENST00000502955 TAL1P17542 331 aaPredicted RBP16.51■□□□□ 0.23
DDR1-247ENST00000502955 SLFNL1Q499Z3 407 aa16.51■□□□□ 0.23
DDR1-247ENST00000502955 SIRT2Q8IXJ6 389 aa16.51■□□□□ 0.23
DDR1-247ENST00000502955 MYLIPQ8WY64 445 aa16.51■□□□□ 0.23
DDR1-247ENST00000502955 DDRGK1Q96HY6 314 aa16.51■□□□□ 0.23
DDR1-247ENST00000502955 RNPC3Q96LT9 517 aaKnown RBP16.51■□□□□ 0.23
DDR1-247ENST00000502955 HAUS7Q99871 368 aa16.51■□□□□ 0.23
DDR1-247ENST00000502955 BOLA2Q9H3K6 86 aa16.51■□□□□ 0.23
DDR1-247ENST00000502955 SYNGAP1Q96PV0 1343 aa16.5■□□□□ 0.23
DDR1-247ENST00000502955 MS4A1P11836 297 aa16.5■□□□□ 0.23
DDR1-247ENST00000502955 RAG1P15918 1043 aa16.5■□□□□ 0.23
DDR1-247ENST00000502955 EPHB4P54760 987 aa16.5■□□□□ 0.23
DDR1-247ENST00000502955 HNRNPUQ00839 825 aaKnown RBP eCLIP16.5■□□□□ 0.23
DDR1-247ENST00000502955 FPGSQ05932 587 aa16.5■□□□□ 0.23
DDR1-247ENST00000502955 CTR9Q6PD62 1173 aa16.5■□□□□ 0.23
DDR1-247ENST00000502955 MAMDC4Q6UXC1 1216 aa16.5■□□□□ 0.23
DDR1-247ENST00000502955 CNPY2Q9Y2B0 182 aa16.5■□□□□ 0.23
DDR1-247ENST00000502955 MOXD2PA6NHM9 499 aa16.49■□□□□ 0.23
DDR1-247ENST00000502955 APBB1O00213 710 aa16.49■□□□□ 0.23
DDR1-247ENST00000502955 PQBP1O60828 265 aaKnown RBP16.49■□□□□ 0.23
DDR1-247ENST00000502955 FOSL2P15408 326 aa16.49■□□□□ 0.23
DDR1-247ENST00000502955 ACLYP53396 1101 aa16.49■□□□□ 0.23
DDR1-247ENST00000502955 FAAP100Q0VG06 881 aa16.49■□□□□ 0.23
DDR1-247ENST00000502955 FAM83BQ5T0W9 1011 aa16.49■□□□□ 0.23
DDR1-247ENST00000502955 CCSAPQ6IQ19 270 aaPredicted RBP16.49■□□□□ 0.23
DDR1-247ENST00000502955 SAMD1Q6SPF0 538 aaPredicted RBP16.49■□□□□ 0.23
DDR1-247ENST00000502955 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.49■□□□□ 0.23
DDR1-247ENST00000502955 KLHDC9Q8NEP7 349 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms