RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 DLL1O00548 723 aa7.34□□□□□ -1.23
LSM3P4-201ENST00000502948 MPHOSPH10O00566 681 aaKnown RBP7.34□□□□□ -1.23
LSM3P4-201ENST00000502948 FLOT1O75955 427 aa7.34□□□□□ -1.23
LSM3P4-201ENST00000502948 MBD4O95243 580 aa7.34□□□□□ -1.23
LSM3P4-201ENST00000502948 FDX1P10109 184 aa7.34□□□□□ -1.23
LSM3P4-201ENST00000502948 AKR1B1P15121 316 aa7.34□□□□□ -1.23
LSM3P4-201ENST00000502948 OAZ1P54368 228 aa7.34□□□□□ -1.23
LSM3P4-201ENST00000502948 RTP1P59025 263 aa7.34□□□□□ -1.23
LSM3P4-201ENST00000502948 NKX3-2P78367 333 aa7.34□□□□□ -1.23
LSM3P4-201ENST00000502948 TMEM132BQ14DG7 1078 aa7.34□□□□□ -1.23
LSM3P4-201ENST00000502948 ZNF792Q3KQV3 632 aa7.34□□□□□ -1.23
LSM3P4-201ENST00000502948 KIAA1755Q5JYT7 1200 aa7.34□□□□□ -1.23
LSM3P4-201ENST00000502948 WDR78Q5VTH9 848 aa7.34□□□□□ -1.23
LSM3P4-201ENST00000502948 MAMDC4Q6UXC1 1216 aa7.34□□□□□ -1.23
LSM3P4-201ENST00000502948 TICAM2Q86XR7 235 aa7.34□□□□□ -1.23
LSM3P4-201ENST00000502948 REPS2Q8NFH8 660 aa7.34□□□□□ -1.23
LSM3P4-201ENST00000502948 MKL1Q969V6 931 aa7.34□□□□□ -1.23
LSM3P4-201ENST00000502948 DNAJC2Q99543 621 aaKnown RBP7.34□□□□□ -1.23
LSM3P4-201ENST00000502948 TINF2Q9BSI4 451 aa7.34□□□□□ -1.23
LSM3P4-201ENST00000502948 TSEN34Q9BSV6 310 aaKnown RBP7.34□□□□□ -1.23
LSM3P4-201ENST00000502948 LRRCC1Q9C099 1032 aa7.34□□□□□ -1.23
LSM3P4-201ENST00000502948 ARMT1Q9H993 441 aa7.34□□□□□ -1.23
LSM3P4-201ENST00000502948 ZNF287Q9HBT7 754 aa7.34□□□□□ -1.23
LSM3P4-201ENST00000502948 NYAP2Q9P242 653 aa7.34□□□□□ -1.23
LSM3P4-201ENST00000502948 ZNF214Q9UL59 606 aaPredicted RBP7.34□□□□□ -1.23
LSM3P4-201ENST00000502948 PPP1R9AQ9ULJ8 1098 aa7.34□□□□□ -1.23
LSM3P4-201ENST00000502948 TACC3Q9Y6A5 838 aa7.34□□□□□ -1.23
LSM3P4-201ENST00000502948 SYNGAP1Q96PV0 1343 aa7.33□□□□□ -1.24
LSM3P4-201ENST00000502948 DNAJC25-GNG10A0A024R161 153 aa7.33□□□□□ -1.24
LSM3P4-201ENST00000502948 ZFYP08048 801 aaPredicted RBP7.33□□□□□ -1.24
LSM3P4-201ENST00000502948 EEF2P13639 858 aaKnown RBP7.33□□□□□ -1.24
LSM3P4-201ENST00000502948 AKR1A1P14550 325 aa7.33□□□□□ -1.24
LSM3P4-201ENST00000502948 GNAT2P19087 354 aa7.33□□□□□ -1.24
LSM3P4-201ENST00000502948 CST5P28325 142 aaPredicted RBP7.33□□□□□ -1.24
LSM3P4-201ENST00000502948 CNGA1P29973 690 aa7.33□□□□□ -1.24
LSM3P4-201ENST00000502948 STAT3P40763 770 aa7.33□□□□□ -1.24
LSM3P4-201ENST00000502948 SMAD3P84022 425 aaKnown RBP7.33□□□□□ -1.24
LSM3P4-201ENST00000502948 MDM2Q00987 491 aaPredicted RBP7.33□□□□□ -1.24
LSM3P4-201ENST00000502948 KCTD2Q14681 263 aa7.33□□□□□ -1.24
LSM3P4-201ENST00000502948 LRRC41Q15345 812 aa7.33□□□□□ -1.24
LSM3P4-201ENST00000502948 CTR9Q6PD62 1173 aa7.33□□□□□ -1.24
LSM3P4-201ENST00000502948 ANKRD33Q7Z3H0 272 aa7.33□□□□□ -1.24
LSM3P4-201ENST00000502948 RNF180Q86T96 592 aa7.33□□□□□ -1.24
LSM3P4-201ENST00000502948 NCAPG2Q86XI2 1143 aa7.33□□□□□ -1.24
LSM3P4-201ENST00000502948 PRPF38AQ8NAV1 312 aaKnown RBP7.33□□□□□ -1.24
LSM3P4-201ENST00000502948 SLC44A5Q8NCS7 719 aa7.33□□□□□ -1.24
LSM3P4-201ENST00000502948 ATG4CQ96DT6 458 aa7.33□□□□□ -1.24
LSM3P4-201ENST00000502948 DYNLL2Q96FJ2 89 aa7.33□□□□□ -1.24
LSM3P4-201ENST00000502948 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.33□□□□□ -1.24
LSM3P4-201ENST00000502948 SEZ6LQ9BYH1 1024 aa7.33□□□□□ -1.24
LSM3P4-201ENST00000502948 PLIN4Q96Q06 1357 aa7.33□□□□□ -1.24
LSM3P4-201ENST00000502948 MROH7Q68CQ1 1323 aa7.32□□□□□ -1.24
LSM3P4-201ENST00000502948 IGKV6D-41A0A0C4DH26 115 aa7.32□□□□□ -1.24
LSM3P4-201ENST00000502948 MOXD2PA6NHM9 499 aa7.32□□□□□ -1.24
LSM3P4-201ENST00000502948 KIAA0355O15063 1070 aa7.32□□□□□ -1.24
LSM3P4-201ENST00000502948 PRKAB2O43741 272 aa7.32□□□□□ -1.24
LSM3P4-201ENST00000502948 PLA2G6O60733 806 aa7.32□□□□□ -1.24
LSM3P4-201ENST00000502948 ADAMTS4O75173 837 aa7.32□□□□□ -1.24
LSM3P4-201ENST00000502948 ZNF865P0CJ78 1059 aaPredicted RBP7.32□□□□□ -1.24
LSM3P4-201ENST00000502948 RARBP10826 455 aa7.32□□□□□ -1.24
LSM3P4-201ENST00000502948 EVX2Q03828 476 aa7.32□□□□□ -1.24
LSM3P4-201ENST00000502948 LRRFIP1Q32MZ4 808 aaKnown RBP7.32□□□□□ -1.24
LSM3P4-201ENST00000502948 PPP4R3BQ5MIZ7 849 aa7.32□□□□□ -1.24
LSM3P4-201ENST00000502948 GJC2Q5T442 439 aaPredicted RBP7.32□□□□□ -1.24
LSM3P4-201ENST00000502948 KBTBD3Q8NAB2 608 aa7.32□□□□□ -1.24
LSM3P4-201ENST00000502948 GUCD1Q96NT3 240 aa7.32□□□□□ -1.24
LSM3P4-201ENST00000502948 STRBPQ96SI9 672 aaKnown RBP7.32□□□□□ -1.24
LSM3P4-201ENST00000502948 MMP19Q99542 508 aa7.32□□□□□ -1.24
LSM3P4-201ENST00000502948 SLF1Q9BQI6 1058 aa7.32□□□□□ -1.24
LSM3P4-201ENST00000502948 TEX13BQ9BXU2 312 aa7.32□□□□□ -1.24
LSM3P4-201ENST00000502948 PUS7LQ9H0K6 701 aaKnown RBP7.32□□□□□ -1.24
LSM3P4-201ENST00000502948 BOLA2Q9H3K6 86 aa7.32□□□□□ -1.24
LSM3P4-201ENST00000502948 DCTPP1Q9H773 170 aa7.32□□□□□ -1.24
LSM3P4-201ENST00000502948 PDLIM7Q9NR12 457 aa7.32□□□□□ -1.24
LSM3P4-201ENST00000502948 ECHDC1Q9NTX5 307 aa7.32□□□□□ -1.24
LSM3P4-201ENST00000502948 FBXO40Q9UH90 709 aa7.32□□□□□ -1.24
LSM3P4-201ENST00000502948 SLC4A4Q9Y6R1 1079 aa7.32□□□□□ -1.24
LSM3P4-201ENST00000502948 ELP1O95163 1332 aa7.31□□□□□ -1.24
LSM3P4-201ENST00000502948 TTC41PQ6P2S7 1318 aa7.31□□□□□ -1.24
LSM3P4-201ENST00000502948 GSG1L2A8MUP6 293 aa7.31□□□□□ -1.24
LSM3P4-201ENST00000502948 F5H6K3 240 aa7.31□□□□□ -1.24
LSM3P4-201ENST00000502948 APBB1O00213 710 aa7.31□□□□□ -1.24
LSM3P4-201ENST00000502948 DUSP11O75319 330 aaKnown RBP7.31□□□□□ -1.24
LSM3P4-201ENST00000502948 CLTBP09497 229 aa7.31□□□□□ -1.24
LSM3P4-201ENST00000502948 CYP2D6P10635 497 aa7.31□□□□□ -1.24
LSM3P4-201ENST00000502948 RASA1P20936 1047 aa7.31□□□□□ -1.24
LSM3P4-201ENST00000502948 KLRC3Q07444 240 aa7.31□□□□□ -1.24
LSM3P4-201ENST00000502948 MAPK8IP2Q13387 824 aaPredicted RBP7.31□□□□□ -1.24
LSM3P4-201ENST00000502948 PLS1Q14651 629 aa7.31□□□□□ -1.24
LSM3P4-201ENST00000502948 ZNF697Q5TEC3 545 aa7.31□□□□□ -1.24
LSM3P4-201ENST00000502948 CCSAPQ6IQ19 270 aaPredicted RBP7.31□□□□□ -1.24
LSM3P4-201ENST00000502948 SPICE1Q8N0Z3 855 aa7.31□□□□□ -1.24
LSM3P4-201ENST00000502948 MIER1Q8N108 512 aa7.31□□□□□ -1.24
LSM3P4-201ENST00000502948 GMCL1P1Q8NEA9 526 aa7.31□□□□□ -1.24
LSM3P4-201ENST00000502948 KLHDC9Q8NEP7 349 aa7.31□□□□□ -1.24
LSM3P4-201ENST00000502948 CHST13Q8NET6 341 aa7.31□□□□□ -1.24
LSM3P4-201ENST00000502948 NUP133Q8WUM0 1156 aa7.31□□□□□ -1.24
LSM3P4-201ENST00000502948 APPBP2Q92624 585 aa7.31□□□□□ -1.24
LSM3P4-201ENST00000502948 XPNPEP3Q9NQH7 507 aa7.31□□□□□ -1.24
LSM3P4-201ENST00000502948 CNPY2Q9Y2B0 182 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms