RNA–Protein interactions for RNA: ENST00000502563.5

UBE2D3-212, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 680 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-212ENST00000502563 ZSWIM5Q9P217 1185 aa12.63□□□□□ -0.39
UBE2D3-212ENST00000502563 STX8Q9UNK0 236 aa12.63□□□□□ -0.39
UBE2D3-212ENST00000502563 CASP8AP2Q9UKL3 1982 aa12.63□□□□□ -0.39
UBE2D3-212ENST00000502563 B4E1Z4 1266 aa12.62□□□□□ -0.39
UBE2D3-212ENST00000502563 SLC27A2O14975 620 aa12.62□□□□□ -0.39
UBE2D3-212ENST00000502563 COPB2P35606 906 aa12.62□□□□□ -0.39
UBE2D3-212ENST00000502563 OAZ1P54368 228 aa12.62□□□□□ -0.39
UBE2D3-212ENST00000502563 CCNA1P78396 465 aa12.62□□□□□ -0.39
UBE2D3-212ENST00000502563 DGKZQ13574 1117 aa12.62□□□□□ -0.39
UBE2D3-212ENST00000502563 SART3Q15020 963 aaKnown RBP12.62□□□□□ -0.39
UBE2D3-212ENST00000502563 ZYXQ15942 572 aaKnown RBP12.62□□□□□ -0.39
UBE2D3-212ENST00000502563 RRP12Q5JTH9 1297 aaKnown RBP12.62□□□□□ -0.39
UBE2D3-212ENST00000502563 CREB3L3Q68CJ9 461 aa12.62□□□□□ -0.39
UBE2D3-212ENST00000502563 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.62□□□□□ -0.39
UBE2D3-212ENST00000502563 RALYLQ86SE5 291 aaKnown RBP12.62□□□□□ -0.39
UBE2D3-212ENST00000502563 FAM160B2Q86V87 743 aa12.62□□□□□ -0.39
UBE2D3-212ENST00000502563 MB21D2Q8IYB1 491 aaPredicted RBP12.62□□□□□ -0.39
UBE2D3-212ENST00000502563 STK11IPQ8N1F8 1099 aa12.62□□□□□ -0.39
UBE2D3-212ENST00000502563 PRPF38AQ8NAV1 312 aaKnown RBP12.62□□□□□ -0.39
UBE2D3-212ENST00000502563 GPRC5AQ8NFJ5 357 aa12.62□□□□□ -0.39
UBE2D3-212ENST00000502563 DCAF4Q8WV16 495 aa12.62□□□□□ -0.39
UBE2D3-212ENST00000502563 TMEM47Q9BQJ4 181 aa12.62□□□□□ -0.39
UBE2D3-212ENST00000502563 INCENPQ9NQS7 918 aa12.62□□□□□ -0.39
UBE2D3-212ENST00000502563 RBPJLQ9UBG7 517 aa12.62□□□□□ -0.39
UBE2D3-212ENST00000502563 FEM1BQ9UK73 627 aa12.62□□□□□ -0.39
UBE2D3-212ENST00000502563 PPP1R9AQ9ULJ8 1098 aa12.62□□□□□ -0.39
UBE2D3-212ENST00000502563 HMGB1P09429 215 aaKnown RBP12.61□□□□□ -0.39
UBE2D3-212ENST00000502563 BMP3P12645 472 aa12.61□□□□□ -0.39
UBE2D3-212ENST00000502563 ZKSCAN1P17029 563 aaPredicted RBP12.61□□□□□ -0.39
UBE2D3-212ENST00000502563 HOXD10P28358 340 aa12.61□□□□□ -0.39
UBE2D3-212ENST00000502563 MAPK4P31152 587 aa12.61□□□□□ -0.39
UBE2D3-212ENST00000502563 HSPA4P34932 840 aa12.61□□□□□ -0.39
UBE2D3-212ENST00000502563 FCGRTP55899 365 aa12.61□□□□□ -0.39
UBE2D3-212ENST00000502563 ERVK-9P63128 1117 aa12.61□□□□□ -0.39
UBE2D3-212ENST00000502563 ERVK-24P63145 666 aa12.61□□□□□ -0.39
UBE2D3-212ENST00000502563 SEC23AQ15436 765 aa12.61□□□□□ -0.39
UBE2D3-212ENST00000502563 GPATCH4Q5T3I0 446 aaKnown RBP12.61□□□□□ -0.39
UBE2D3-212ENST00000502563 FBXO46Q6PJ61 603 aaPredicted RBP12.61□□□□□ -0.39
UBE2D3-212ENST00000502563 POTEEQ6S8J3 1075 aa12.61□□□□□ -0.39
UBE2D3-212ENST00000502563 BTNL9Q6UXG8 535 aa12.61□□□□□ -0.39
UBE2D3-212ENST00000502563 OTOP1Q7RTM1 612 aa12.61□□□□□ -0.39
UBE2D3-212ENST00000502563 TMTC2Q8N394 836 aa12.61□□□□□ -0.39
UBE2D3-212ENST00000502563 FBXL16Q8N461 479 aa12.61□□□□□ -0.39
UBE2D3-212ENST00000502563 ANKRD13CQ8N6S4 541 aa12.61□□□□□ -0.39
UBE2D3-212ENST00000502563 ENAHQ8N8S7 591 aaPredicted RBP12.61□□□□□ -0.39
UBE2D3-212ENST00000502563 SHCBP1Q8NEM2 672 aa12.61□□□□□ -0.39
UBE2D3-212ENST00000502563 CHURC1Q8WUH1 139 aa12.61□□□□□ -0.39
UBE2D3-212ENST00000502563 IL17RAQ96F46 866 aa12.61□□□□□ -0.39
UBE2D3-212ENST00000502563 MAP3K14Q99558 947 aa12.61□□□□□ -0.39
UBE2D3-212ENST00000502563 UBAC1Q9BSL1 405 aa12.61□□□□□ -0.39
UBE2D3-212ENST00000502563 TANGO6Q9C0B7 1094 aa12.61□□□□□ -0.39
UBE2D3-212ENST00000502563 CPA4Q9UI42 421 aa12.61□□□□□ -0.39
UBE2D3-212ENST00000502563 PNMA2Q9UL42 364 aa12.61□□□□□ -0.39
UBE2D3-212ENST00000502563 TNKSO95271 1327 aa12.61□□□□□ -0.39
UBE2D3-212ENST00000502563 C19orf67A6NJJ6 358 aa12.6□□□□□ -0.39
UBE2D3-212ENST00000502563 NMT2O60551 498 aa12.6□□□□□ -0.39
UBE2D3-212ENST00000502563 FLOT1O75955 427 aa12.6□□□□□ -0.39
UBE2D3-212ENST00000502563 PDHBP11177 359 aa12.6□□□□□ -0.39
UBE2D3-212ENST00000502563 MCM5P33992 734 aa12.6□□□□□ -0.39
UBE2D3-212ENST00000502563 SLC1A4P43007 532 aa12.6□□□□□ -0.39
UBE2D3-212ENST00000502563 STAT2P52630 851 aa12.6□□□□□ -0.39
UBE2D3-212ENST00000502563 ATP2B2Q01814 1243 aa12.6□□□□□ -0.39
UBE2D3-212ENST00000502563 IRF5Q13568 498 aa12.6□□□□□ -0.39
UBE2D3-212ENST00000502563 COL13A1Q5TAT6 717 aaPredicted RBP12.6□□□□□ -0.39
UBE2D3-212ENST00000502563 SLFN13Q68D06 897 aa12.6□□□□□ -0.39
UBE2D3-212ENST00000502563 STOX1Q6ZVD7 989 aa12.6□□□□□ -0.39
UBE2D3-212ENST00000502563 SPICE1Q8N0Z3 855 aa12.6□□□□□ -0.39
UBE2D3-212ENST00000502563 REPS2Q8NFH8 660 aa12.6□□□□□ -0.39
UBE2D3-212ENST00000502563 TMEM87BQ96K49 555 aa12.6□□□□□ -0.39
UBE2D3-212ENST00000502563 SLF1Q9BQI6 1058 aa12.6□□□□□ -0.39
UBE2D3-212ENST00000502563 MAF1Q9H063 256 aa12.6□□□□□ -0.39
UBE2D3-212ENST00000502563 EFCC1Q9HA90 598 aa12.6□□□□□ -0.39
UBE2D3-212ENST00000502563 MGAMO43451 1857 aa12.59□□□□□ -0.39
UBE2D3-212ENST00000502563 ERICH2A1L162 156 aa12.59□□□□□ -0.39
UBE2D3-212ENST00000502563 VWA5AO00534 786 aa12.59□□□□□ -0.39
UBE2D3-212ENST00000502563 CNMDO75829 334 aa12.59□□□□□ -0.39
UBE2D3-212ENST00000502563 SLC25A27O95847 323 aa12.59□□□□□ -0.39
UBE2D3-212ENST00000502563 LIFRP42702 1097 aa12.59□□□□□ -0.39
UBE2D3-212ENST00000502563 FAM83BQ5T0W9 1011 aa12.59□□□□□ -0.39
UBE2D3-212ENST00000502563 ABRAQ8N0Z2 381 aa12.59□□□□□ -0.39
UBE2D3-212ENST00000502563 LRRC47Q8N1G4 583 aaKnown RBP12.59□□□□□ -0.39
UBE2D3-212ENST00000502563 NKX2-3Q8TAU0 364 aa12.59□□□□□ -0.39
UBE2D3-212ENST00000502563 CD99L2Q8TCZ2 262 aa12.59□□□□□ -0.39
UBE2D3-212ENST00000502563 SOCS4Q8WXH5 440 aa12.59□□□□□ -0.39
UBE2D3-212ENST00000502563 SLC38A10Q9HBR0 1119 aa12.59□□□□□ -0.39
UBE2D3-212ENST00000502563 TXNRD2Q9NNW7 524 aa12.59□□□□□ -0.39
UBE2D3-212ENST00000502563 SRRDQ9UH36 339 aa12.59□□□□□ -0.39
UBE2D3-212ENST00000502563 ZNF236Q9UL36 1845 aa12.59□□□□□ -0.39
UBE2D3-212ENST00000502563 STRNO43815 780 aa12.58□□□□□ -0.4
UBE2D3-212ENST00000502563 XRCC5P13010 732 aaKnown RBP12.58□□□□□ -0.4
UBE2D3-212ENST00000502563 PSMC4P43686 418 aa12.58□□□□□ -0.4
UBE2D3-212ENST00000502563 RCAN1P53805 252 aa12.58□□□□□ -0.4
UBE2D3-212ENST00000502563 ZNF543Q08ER8 600 aa12.58□□□□□ -0.4
UBE2D3-212ENST00000502563 ASPRV1Q53RT3 343 aa12.58□□□□□ -0.4
UBE2D3-212ENST00000502563 IFIT1BQ5T764 474 aaKnown RBP12.58□□□□□ -0.4
UBE2D3-212ENST00000502563 CYB5R4Q7L1T6 521 aa12.58□□□□□ -0.4
UBE2D3-212ENST00000502563 SGMS1Q86VZ5 419 aa12.58□□□□□ -0.4
UBE2D3-212ENST00000502563 PNMA1Q8ND90 353 aa12.58□□□□□ -0.4
UBE2D3-212ENST00000502563 IGDCC4Q8TDY8 1250 aa12.58□□□□□ -0.4
UBE2D3-212ENST00000502563 PXYLP1Q8TE99 480 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms