RNA–Protein interactions for RNA: ENST00000498698.1

HMGCL-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 3

Gene HMGCL, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-207ENST00000498698 CLIP2Q9UDT6 1046 aa11.29□□□□□ -0.6
HMGCL-207ENST00000498698 PPP1R9AQ9ULJ8 1098 aa11.29□□□□□ -0.6
HMGCL-207ENST00000498698 NAV1Q8NEY1 1877 aa11.29□□□□□ -0.6
HMGCL-207ENST00000498698 VWA5AO00534 786 aa11.28□□□□□ -0.6
HMGCL-207ENST00000498698 COBLO75128 1261 aa11.28□□□□□ -0.6
HMGCL-207ENST00000498698 NDUFB10O96000 172 aa11.28□□□□□ -0.6
HMGCL-207ENST00000498698 NUCB1Q02818 461 aa11.28□□□□□ -0.6
HMGCL-207ENST00000498698 PDE4BQ07343 736 aa11.28□□□□□ -0.6
HMGCL-207ENST00000498698 PLS1Q14651 629 aa11.28□□□□□ -0.6
HMGCL-207ENST00000498698 HABP4Q5JVS0 413 aaKnown RBP11.28□□□□□ -0.6
HMGCL-207ENST00000498698 VPS53Q5VIR6 699 aa11.28□□□□□ -0.6
HMGCL-207ENST00000498698 MFSD14CQ5VZR4 134 aa11.28□□□□□ -0.6
HMGCL-207ENST00000498698 B4GALNT3Q6L9W6 998 aa11.28□□□□□ -0.6
HMGCL-207ENST00000498698 SAMD1Q6SPF0 538 aaPredicted RBP11.28□□□□□ -0.6
HMGCL-207ENST00000498698 NECAB2Q7Z6G3 386 aa11.28□□□□□ -0.6
HMGCL-207ENST00000498698 CHD1LQ86WJ1 897 aa11.28□□□□□ -0.6
HMGCL-207ENST00000498698 ABRAQ8N0Z2 381 aa11.28□□□□□ -0.6
HMGCL-207ENST00000498698 REPS2Q8NFH8 660 aa11.28□□□□□ -0.6
HMGCL-207ENST00000498698 NEDD1Q8NHV4 660 aa11.28□□□□□ -0.6
HMGCL-207ENST00000498698 CEP95Q96GE4 821 aa11.28□□□□□ -0.6
HMGCL-207ENST00000498698 NUP88Q99567 741 aaPredicted RBP11.28□□□□□ -0.6
HMGCL-207ENST00000498698 HELLSQ9NRZ9 838 aa11.28□□□□□ -0.6
HMGCL-207ENST00000498698 SYNPO2Q9UMS6 1093 aa11.28□□□□□ -0.6
HMGCL-207ENST00000498698 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.28□□□□□ -0.6
HMGCL-207ENST00000498698 DOCK3Q8IZD9 2030 aa11.27□□□□□ -0.61
HMGCL-207ENST00000498698 RAD21O60216 631 aa11.27□□□□□ -0.61
HMGCL-207ENST00000498698 SLC25A27O95847 323 aa11.27□□□□□ -0.61
HMGCL-207ENST00000498698 SLC3A2P08195 630 aaKnown RBP11.27□□□□□ -0.61
HMGCL-207ENST00000498698 CYP2C19P33261 490 aa11.27□□□□□ -0.61
HMGCL-207ENST00000498698 ALX1Q15699 326 aa11.27□□□□□ -0.61
HMGCL-207ENST00000498698 FAM47AQ5JRC9 791 aa11.27□□□□□ -0.61
HMGCL-207ENST00000498698 OLFML2BQ68BL8 750 aa11.27□□□□□ -0.61
HMGCL-207ENST00000498698 DPP9Q86TI2 863 aa11.27□□□□□ -0.61
HMGCL-207ENST00000498698 NCAPG2Q86XI2 1143 aa11.27□□□□□ -0.61
HMGCL-207ENST00000498698 RIOX2Q8IUF8 465 aa11.27□□□□□ -0.61
HMGCL-207ENST00000498698 PLEKHM2Q8IWE5 1019 aa11.27□□□□□ -0.61
HMGCL-207ENST00000498698 FAM227BQ96M60 508 aa11.27□□□□□ -0.61
HMGCL-207ENST00000498698 NBPF3Q9H094 633 aa11.27□□□□□ -0.61
HMGCL-207ENST00000498698 ANAPC4Q9UJX5 808 aa11.27□□□□□ -0.61
HMGCL-207ENST00000498698 ZNF214Q9UL59 606 aaPredicted RBP11.27□□□□□ -0.61
HMGCL-207ENST00000498698 COLQQ9Y215 455 aaPredicted RBP11.27□□□□□ -0.61
HMGCL-207ENST00000498698 NR2E3Q9Y5X4 410 aa11.27□□□□□ -0.61
HMGCL-207ENST00000498698 TACC3Q9Y6A5 838 aa11.27□□□□□ -0.61
HMGCL-207ENST00000498698 MGAMO43451 1857 aa11.26□□□□□ -0.61
HMGCL-207ENST00000498698 A0A0D9SFI3 127 aa11.26□□□□□ -0.61
HMGCL-207ENST00000498698 EVI5O60447 810 aa11.26□□□□□ -0.61
HMGCL-207ENST00000498698 TTLL1O95922 423 aa11.26□□□□□ -0.61
HMGCL-207ENST00000498698 FCER1AP12319 257 aa11.26□□□□□ -0.61
HMGCL-207ENST00000498698 STAT3P40763 770 aa11.26□□□□□ -0.61
HMGCL-207ENST00000498698 TFAP4Q01664 338 aa11.26□□□□□ -0.61
HMGCL-207ENST00000498698 MCMDC2Q4G0Z9 681 aa11.26□□□□□ -0.61
HMGCL-207ENST00000498698 GMCL1P1Q8NEA9 526 aa11.26□□□□□ -0.61
HMGCL-207ENST00000498698 TRPV1Q8NER1 839 aa11.26□□□□□ -0.61
HMGCL-207ENST00000498698 SLF1Q9BQI6 1058 aa11.26□□□□□ -0.61
HMGCL-207ENST00000498698 OSBPL3Q9H4L5 887 aa11.26□□□□□ -0.61
HMGCL-207ENST00000498698 INCENPQ9NQS7 918 aa11.26□□□□□ -0.61
HMGCL-207ENST00000498698 SUPT16HQ9Y5B9 1047 aaKnown RBP11.26□□□□□ -0.61
HMGCL-207ENST00000498698 PLIN4Q96Q06 1357 aa11.26□□□□□ -0.61
HMGCL-207ENST00000498698 FGAP02671 866 aa11.25□□□□□ -0.61
HMGCL-207ENST00000498698 FGRP09769 529 aa11.25□□□□□ -0.61
HMGCL-207ENST00000498698 TSPY3P0CV98 308 aa11.25□□□□□ -0.61
HMGCL-207ENST00000498698 TSPY8P0CW00 308 aa11.25□□□□□ -0.61
HMGCL-207ENST00000498698 COL6A1P12109 1028 aa11.25□□□□□ -0.61
HMGCL-207ENST00000498698 CYBAP13498 195 aa11.25□□□□□ -0.61
HMGCL-207ENST00000498698 CTDSPL2Q05D32 466 aa11.25□□□□□ -0.61
HMGCL-207ENST00000498698 NMIQ13287 307 aaPredicted RBP11.25□□□□□ -0.61
HMGCL-207ENST00000498698 ZNF589Q86UQ0 364 aaPredicted RBP11.25□□□□□ -0.61
HMGCL-207ENST00000498698 LRRC47Q8N1G4 583 aaKnown RBP11.25□□□□□ -0.61
HMGCL-207ENST00000498698 PRPF38AQ8NAV1 312 aaKnown RBP11.25□□□□□ -0.61
HMGCL-207ENST00000498698 C11orf49Q9H6J7 331 aa11.25□□□□□ -0.61
HMGCL-207ENST00000498698 SLC5A4Q9NY91 659 aa11.25□□□□□ -0.61
HMGCL-207ENST00000498698 DDX20Q9UHI6 824 aaKnown RBP11.25□□□□□ -0.61
HMGCL-207ENST00000498698 CEP290O15078 2479 aa11.25□□□□□ -0.61
HMGCL-207ENST00000498698 PLXNB2O15031 1838 aa11.24□□□□□ -0.61
HMGCL-207ENST00000498698 TRIM6-TRIM34B2RNG4 842 aa11.24□□□□□ -0.61
HMGCL-207ENST00000498698 ATP2A1O14983 1001 aa11.24□□□□□ -0.61
HMGCL-207ENST00000498698 ORC4O43929 436 aa11.24□□□□□ -0.61
HMGCL-207ENST00000498698 HSPD1P10809 573 aaKnown RBP11.24□□□□□ -0.61
HMGCL-207ENST00000498698 COPB2P35606 906 aa11.24□□□□□ -0.61
HMGCL-207ENST00000498698 NOVP48745 357 aa11.24□□□□□ -0.61
HMGCL-207ENST00000498698 SLFN13Q68D06 897 aa11.24□□□□□ -0.61
HMGCL-207ENST00000498698 RILPL2Q969X0 211 aa11.24□□□□□ -0.61
HMGCL-207ENST00000498698 MAML3Q96JK9 1138 aa11.24□□□□□ -0.61
HMGCL-207ENST00000498698 MMP19Q99542 508 aa11.24□□□□□ -0.61
HMGCL-207ENST00000498698 TEX13BQ9BXU2 312 aa11.24□□□□□ -0.61
HMGCL-207ENST00000498698 PRO3102Q9H379 93 aa11.24□□□□□ -0.61
HMGCL-207ENST00000498698 IL17RBQ9NRM6 502 aa11.24□□□□□ -0.61
HMGCL-207ENST00000498698 FEM1BQ9UK73 627 aa11.24□□□□□ -0.61
HMGCL-207ENST00000498698 PFASO15067 1338 aa11.24□□□□□ -0.61
HMGCL-207ENST00000498698 BAZ2AQ9UIF9 1905 aaKnown RBP11.23□□□□□ -0.61
HMGCL-207ENST00000498698 TSPY2A6NKD2 308 aa11.23□□□□□ -0.61
HMGCL-207ENST00000498698 NMT2O60551 498 aa11.23□□□□□ -0.61
HMGCL-207ENST00000498698 MSCO60682 206 aa11.23□□□□□ -0.61
HMGCL-207ENST00000498698 ZBED4O75132 1171 aa11.23□□□□□ -0.61
HMGCL-207ENST00000498698 PGK2P07205 417 aa11.23□□□□□ -0.61
HMGCL-207ENST00000498698 BMP3P12645 472 aa11.23□□□□□ -0.61
HMGCL-207ENST00000498698 SDSP20132 328 aa11.23□□□□□ -0.61
HMGCL-207ENST00000498698 CNGA1P29973 690 aa11.23□□□□□ -0.61
HMGCL-207ENST00000498698 KCTD2Q14681 263 aa11.23□□□□□ -0.61
HMGCL-207ENST00000498698 ZNF792Q3KQV3 632 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms