RNA–Protein interactions for RNA: ENST00000498529.5

CSNK1E-214, Transcript of casein kinase 1 epsilon, humanhuman

TSL 3

Gene CSNK1E, Length 381 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-214ENST00000498529 SH3RF1Q7Z6J0 888 aa6.91□□□□□ -1.3
CSNK1E-214ENST00000498529 TEX11Q8IYF3 940 aa6.91□□□□□ -1.3
CSNK1E-214ENST00000498529 SPATA5Q8NB90 893 aa6.91□□□□□ -1.3
CSNK1E-214ENST00000498529 TRIM43Q96BQ3 446 aaPredicted RBP6.91□□□□□ -1.3
CSNK1E-214ENST00000498529 FAM161BQ96MY7 647 aa6.91□□□□□ -1.3
CSNK1E-214ENST00000498529 DHX36Q9H2U1 1008 aaKnown RBP6.91□□□□□ -1.3
CSNK1E-214ENST00000498529 PI4KBQ9UBF8 816 aa6.91□□□□□ -1.3
CSNK1E-214ENST00000498529 RABGAP1Q9Y3P9 1069 aa6.91□□□□□ -1.3
CSNK1E-214ENST00000498529 SCN10AQ9Y5Y9 1956 aa6.91□□□□□ -1.3
CSNK1E-214ENST00000498529 SIP14410 1827 aa6.9□□□□□ -1.3
CSNK1E-214ENST00000498529 USP17L10C9JJH3 530 aa6.9□□□□□ -1.3
CSNK1E-214ENST00000498529 MSCO60682 206 aa6.9□□□□□ -1.3
CSNK1E-214ENST00000498529 GDF11O95390 407 aa6.9□□□□□ -1.3
CSNK1E-214ENST00000498529 GABPAQ06546 454 aa6.9□□□□□ -1.3
CSNK1E-214ENST00000498529 TRIM60Q495X7 471 aa6.9□□□□□ -1.3
CSNK1E-214ENST00000498529 RASIP1Q5U651 963 aa6.9□□□□□ -1.3
CSNK1E-214ENST00000498529 OLFML2BQ68BL8 750 aa6.9□□□□□ -1.3
CSNK1E-214ENST00000498529 CATSPERGQ6ZRH7 1159 aa6.9□□□□□ -1.3
CSNK1E-214ENST00000498529 ZNF512BQ96KM6 892 aaPredicted RBP6.9□□□□□ -1.3
CSNK1E-214ENST00000498529 KIAA1683Q9H0B3 1180 aa6.9□□□□□ -1.3
CSNK1E-214ENST00000498529 EHD4Q9H223 541 aa6.9□□□□□ -1.3
CSNK1E-214ENST00000498529 PNMA6EA0A0J9YXQ4 647 aa6.89□□□□□ -1.31
CSNK1E-214ENST00000498529 KIAA0355O15063 1070 aa6.89□□□□□ -1.31
CSNK1E-214ENST00000498529 IGSF3O75054 1194 aa6.89□□□□□ -1.31
CSNK1E-214ENST00000498529 COBLO75128 1261 aa6.89□□□□□ -1.31
CSNK1E-214ENST00000498529 CYP2E1P05181 493 aaPredicted RBP6.89□□□□□ -1.31
CSNK1E-214ENST00000498529 CYP2C19P33261 490 aa6.89□□□□□ -1.31
CSNK1E-214ENST00000498529 SHMT1P34896 483 aa6.89□□□□□ -1.31
CSNK1E-214ENST00000498529 CLCN1P35523 988 aa6.89□□□□□ -1.31
CSNK1E-214ENST00000498529 PDE3AQ14432 1141 aa6.89□□□□□ -1.31
CSNK1E-214ENST00000498529 KIAA1755Q5JYT7 1200 aa6.89□□□□□ -1.31
CSNK1E-214ENST00000498529 USP17L2Q6R6M4 530 aa6.89□□□□□ -1.31
CSNK1E-214ENST00000498529 SLC39A5Q6ZMH5 540 aa6.89□□□□□ -1.31
CSNK1E-214ENST00000498529 MAPKAPK5Q8IW41 473 aa6.89□□□□□ -1.31
CSNK1E-214ENST00000498529 ACER1Q8TDN7 264 aa6.89□□□□□ -1.31
CSNK1E-214ENST00000498529 REPIN1Q9BWE0 567 aaKnown RBP6.89□□□□□ -1.31
CSNK1E-214ENST00000498529 SENP6Q9GZR1 1112 aaPredicted RBP6.89□□□□□ -1.31
CSNK1E-214ENST00000498529 AATFQ9NY61 560 aaKnown RBP eCLIP6.89□□□□□ -1.31
CSNK1E-214ENST00000498529 HCSTQ9UBK5 93 aa6.89□□□□□ -1.31
CSNK1E-214ENST00000498529 PALD1Q9ULE6 856 aa6.89□□□□□ -1.31
CSNK1E-214ENST00000498529 PHF24Q9UPV7 400 aa6.89□□□□□ -1.31
CSNK1E-214ENST00000498529 ADGRG1Q9Y653 693 aa6.89□□□□□ -1.31
CSNK1E-214ENST00000498529 TRIP12Q14669 1992 aaPredicted RBP6.88□□□□□ -1.31
CSNK1E-214ENST00000498529 A0A1W2PRG0 241 aa6.88□□□□□ -1.31
CSNK1E-214ENST00000498529 E9PSI1 815 aa6.88□□□□□ -1.31
CSNK1E-214ENST00000498529 SEPT4O43236 478 aa6.88□□□□□ -1.31
CSNK1E-214ENST00000498529 ADAMTS4O75173 837 aa6.88□□□□□ -1.31
CSNK1E-214ENST00000498529 GH2P01242 217 aa6.88□□□□□ -1.31
CSNK1E-214ENST00000498529 OATP04181 439 aa6.88□□□□□ -1.31
CSNK1E-214ENST00000498529 LDHCP07864 332 aa6.88□□□□□ -1.31
CSNK1E-214ENST00000498529 MS4A1P11836 297 aa6.88□□□□□ -1.31
CSNK1E-214ENST00000498529 GSTO1P78417 241 aa6.88□□□□□ -1.31
CSNK1E-214ENST00000498529 GRIN2CQ14957 1233 aa6.88□□□□□ -1.31
CSNK1E-214ENST00000498529 LRRC41Q15345 812 aa6.88□□□□□ -1.31
CSNK1E-214ENST00000498529 FAM47AQ5JRC9 791 aa6.88□□□□□ -1.31
CSNK1E-214ENST00000498529 GJC2Q5T442 439 aaPredicted RBP6.88□□□□□ -1.31
CSNK1E-214ENST00000498529 METTL3Q86U44 580 aaKnown RBP6.88□□□□□ -1.31
CSNK1E-214ENST00000498529 FOXP4Q8IVH2 680 aaPredicted RBP6.88□□□□□ -1.31
CSNK1E-214ENST00000498529 SHCBP1Q8NEM2 672 aa6.88□□□□□ -1.31
CSNK1E-214ENST00000498529 TGFBRAP1Q8WUH2 860 aa6.88□□□□□ -1.31
CSNK1E-214ENST00000498529 BADQ92934 168 aa6.88□□□□□ -1.31
CSNK1E-214ENST00000498529 EDC3Q96F86 508 aaKnown RBP6.88□□□□□ -1.31
CSNK1E-214ENST00000498529 PHOX2BQ99453 314 aa6.88□□□□□ -1.31
CSNK1E-214ENST00000498529 PAGR1Q9BTK6 254 aa6.88□□□□□ -1.31
CSNK1E-214ENST00000498529 MOV10L1Q9BXT6 1211 aaKnown RBP6.88□□□□□ -1.31
CSNK1E-214ENST00000498529 ADAM33Q9BZ11 813 aa6.88□□□□□ -1.31
CSNK1E-214ENST00000498529 IRX2Q9BZI1 471 aaPredicted RBP6.88□□□□□ -1.31
CSNK1E-214ENST00000498529 ZMYND15Q9H091 742 aa6.88□□□□□ -1.31
CSNK1E-214ENST00000498529 GPCPD1Q9NPB8 672 aa6.88□□□□□ -1.31
CSNK1E-214ENST00000498529 GPR108Q9NPR9 543 aa6.88□□□□□ -1.31
CSNK1E-214ENST00000498529 PIH1D3Q9NQM4 214 aaKnown RBP6.88□□□□□ -1.31
CSNK1E-214ENST00000498529 TMOD4Q9NZQ9 345 aa6.88□□□□□ -1.31
CSNK1E-214ENST00000498529 RAPGEFL1Q9UHV5 662 aa6.88□□□□□ -1.31
CSNK1E-214ENST00000498529 USP17L15C9J2P7 530 aa6.87□□□□□ -1.31
CSNK1E-214ENST00000498529 USP17L13C9JLJ4 530 aa6.87□□□□□ -1.31
CSNK1E-214ENST00000498529 USP17L11C9JVI0 530 aa6.87□□□□□ -1.31
CSNK1E-214ENST00000498529 USP17L18D6R9N7 530 aa6.87□□□□□ -1.31
CSNK1E-214ENST00000498529 USP17L22D6RA61 530 aa6.87□□□□□ -1.31
CSNK1E-214ENST00000498529 USP17L17D6RBQ6 530 aa6.87□□□□□ -1.31
CSNK1E-214ENST00000498529 USP17L19D6RCP7 530 aa6.87□□□□□ -1.31
CSNK1E-214ENST00000498529 USP17L20D6RJB6 530 aa6.87□□□□□ -1.31
CSNK1E-214ENST00000498529 NUDT7P0C024 238 aa6.87□□□□□ -1.31
CSNK1E-214ENST00000498529 FOSL2P15408 326 aa6.87□□□□□ -1.31
CSNK1E-214ENST00000498529 COL9A1P20849 921 aa6.87□□□□□ -1.31
CSNK1E-214ENST00000498529 ADORA2AP29274 412 aa6.87□□□□□ -1.31
CSNK1E-214ENST00000498529 DYNLL1P63167 89 aaKnown RBP6.87□□□□□ -1.31
CSNK1E-214ENST00000498529 USP17L24Q0WX57 530 aa6.87□□□□□ -1.31
CSNK1E-214ENST00000498529 ARSIQ5FYB1 569 aa6.87□□□□□ -1.31
CSNK1E-214ENST00000498529 TJAP1Q5JTD0 557 aa6.87□□□□□ -1.31
CSNK1E-214ENST00000498529 MFSD14CQ5VZR4 134 aa6.87□□□□□ -1.31
CSNK1E-214ENST00000498529 CCSAPQ6IQ19 270 aaPredicted RBP6.87□□□□□ -1.31
CSNK1E-214ENST00000498529 SIAH1Q8IUQ4 282 aa6.87□□□□□ -1.31
CSNK1E-214ENST00000498529 ZNF454Q8N9F8 522 aa6.87□□□□□ -1.31
CSNK1E-214ENST00000498529 CDCA7LQ96GN5 454 aa6.87□□□□□ -1.31
CSNK1E-214ENST00000498529 DBNDD2Q9BQY9 259 aa6.87□□□□□ -1.31
CSNK1E-214ENST00000498529 RIOK1Q9BRS2 568 aaKnown RBP6.87□□□□□ -1.31
CSNK1E-214ENST00000498529 SMC4Q9NTJ3 1288 aa6.87□□□□□ -1.31
CSNK1E-214ENST00000498529 TBX21Q9UL17 535 aa6.87□□□□□ -1.31
CSNK1E-214ENST00000498529 ADAMTS5Q9UNA0 930 aa6.87□□□□□ -1.31
CSNK1E-214ENST00000498529 TNNQ9UQP3 1299 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms