RNA–Protein interactions for RNA: ENST00000498431.5

MUC1-220, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-220ENST00000498431 MBD4O95243 580 aa19.41■□□□□ 0.7
MUC1-220ENST00000498431 ITGB8P26012 769 aa19.41■□□□□ 0.7
MUC1-220ENST00000498431 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.41■□□□□ 0.7
MUC1-220ENST00000498431 SEMA6BQ9H3T3 888 aa19.41■□□□□ 0.7
MUC1-220ENST00000498431 ARHGEF10LQ9HCE6 1279 aa19.41■□□□□ 0.7
MUC1-220ENST00000498431 FBXO28Q9NVF7 368 aa19.41■□□□□ 0.7
MUC1-220ENST00000498431 SLC5A4Q9NY91 659 aa19.41■□□□□ 0.7
MUC1-220ENST00000498431 PLXNA1Q9UIW2 1896 aa19.4■□□□□ 0.7
MUC1-220ENST00000498431 PGK2P07205 417 aa19.4■□□□□ 0.7
MUC1-220ENST00000498431 FCER1AP12319 257 aa19.4■□□□□ 0.7
MUC1-220ENST00000498431 TAL1P17542 331 aaPredicted RBP19.4■□□□□ 0.7
MUC1-220ENST00000498431 TLE2Q04725 743 aa19.4■□□□□ 0.7
MUC1-220ENST00000498431 HSP90AB4PQ58FF6 505 aa19.4■□□□□ 0.7
MUC1-220ENST00000498431 TTYH1Q9H313 450 aaPredicted RBP19.4■□□□□ 0.7
MUC1-220ENST00000498431 WDR46O15213 610 aaKnown RBP19.39■□□□□ 0.69
MUC1-220ENST00000498431 ADD2P35612 726 aa19.39■□□□□ 0.69
MUC1-220ENST00000498431 CDK8P49336 464 aa19.39■□□□□ 0.69
MUC1-220ENST00000498431 HNRNPUQ00839 825 aaKnown RBP eCLIP19.39■□□□□ 0.69
MUC1-220ENST00000498431 C1orf53Q5VUE5 145 aa19.39■□□□□ 0.69
MUC1-220ENST00000498431 CLASRPQ8N2M8 674 aaKnown RBP19.39■□□□□ 0.69
MUC1-220ENST00000498431 LENG1Q96BZ8 264 aaPredicted RBP19.39■□□□□ 0.69
MUC1-220ENST00000498431 KIF1BPQ96EK5 621 aa19.39■□□□□ 0.69
MUC1-220ENST00000498431 XPNPEP3Q9NQH7 507 aa19.39■□□□□ 0.69
MUC1-220ENST00000498431 ADAMTS5Q9UNA0 930 aa19.39■□□□□ 0.69
MUC1-220ENST00000498431 PGK1P00558 417 aa19.38■□□□□ 0.69
MUC1-220ENST00000498431 IFIT2P09913 472 aaKnown RBP19.38■□□□□ 0.69
MUC1-220ENST00000498431 EEF2P13639 858 aaKnown RBP19.38■□□□□ 0.69
MUC1-220ENST00000498431 EPHB4P54760 987 aa19.38■□□□□ 0.69
MUC1-220ENST00000498431 C12orf60Q5U649 245 aa19.38■□□□□ 0.69
MUC1-220ENST00000498431 SIRT2Q8IXJ6 389 aa19.38■□□□□ 0.69
MUC1-220ENST00000498431 MYLIPQ8WY64 445 aa19.38■□□□□ 0.69
MUC1-220ENST00000498431 MMP19Q99542 508 aa19.38■□□□□ 0.69
MUC1-220ENST00000498431 SH2D4AQ9H788 454 aa19.38■□□□□ 0.69
MUC1-220ENST00000498431 ATP8A2Q9NTI2 1148 aa19.38■□□□□ 0.69
MUC1-220ENST00000498431 PAG1Q9NWQ8 432 aa19.38■□□□□ 0.69
MUC1-220ENST00000498431 PHF24Q9UPV7 400 aa19.38■□□□□ 0.69
MUC1-220ENST00000498431 USP17L12C9JPN9 530 aa19.37■□□□□ 0.69
MUC1-220ENST00000498431 USP17L21D6R901 530 aa19.37■□□□□ 0.69
MUC1-220ENST00000498431 SLC25A27O95847 323 aa19.37■□□□□ 0.69
MUC1-220ENST00000498431 SMAD3P84022 425 aaKnown RBP19.37■□□□□ 0.69
MUC1-220ENST00000498431 ZNF792Q3KQV3 632 aa19.37■□□□□ 0.69
MUC1-220ENST00000498431 C16orf86Q6ZW13 317 aa19.37■□□□□ 0.69
MUC1-220ENST00000498431 RIOX2Q8IUF8 465 aa19.37■□□□□ 0.69
MUC1-220ENST00000498431 MAFAQ8NHW3 353 aaPredicted RBP19.37■□□□□ 0.69
MUC1-220ENST00000498431 BOLA2Q9H3K6 86 aa19.37■□□□□ 0.69
MUC1-220ENST00000498431 ZNF865P0CJ78 1059 aaPredicted RBP19.36■□□□□ 0.69
MUC1-220ENST00000498431 RARBP10826 455 aa19.36■□□□□ 0.69
MUC1-220ENST00000498431 REPS2Q8NFH8 660 aa19.36■□□□□ 0.69
MUC1-220ENST00000498431 CCDC17Q96LX7 622 aa19.36■□□□□ 0.69
MUC1-220ENST00000498431 TINF2Q9BSI4 451 aa19.36■□□□□ 0.69
MUC1-220ENST00000498431 NRBP1Q9UHY1 535 aa19.36■□□□□ 0.69
MUC1-220ENST00000498431 ZNF214Q9UL59 606 aaPredicted RBP19.36■□□□□ 0.69
MUC1-220ENST00000498431 MYH7P12883 1935 aa19.35■□□□□ 0.69
MUC1-220ENST00000498431 A0A1W2PQ45 241 aaPredicted RBP19.35■□□□□ 0.69
MUC1-220ENST00000498431 A0A1W2PQY0 241 aa19.35■□□□□ 0.69
MUC1-220ENST00000498431 VWA5AO00534 786 aa19.35■□□□□ 0.69
MUC1-220ENST00000498431 CLTBP09497 229 aa19.35■□□□□ 0.69
MUC1-220ENST00000498431 FAM83BQ5T0W9 1011 aa19.35■□□□□ 0.69
MUC1-220ENST00000498431 PPP1R9AQ9ULJ8 1098 aa19.35■□□□□ 0.69
MUC1-220ENST00000498431 ROBO3Q96MS0 1386 aa19.34■□□□□ 0.69
MUC1-220ENST00000498431 GREB1LQ9C091 1923 aaPredicted RBP19.34■□□□□ 0.69
MUC1-220ENST00000498431 RAD21O60216 631 aa19.34■□□□□ 0.69
MUC1-220ENST00000498431 PQBP1O60828 265 aaKnown RBP19.34■□□□□ 0.69
MUC1-220ENST00000498431 STAT3P40763 770 aa19.34■□□□□ 0.69
MUC1-220ENST00000498431 CTR9Q6PD62 1173 aa19.34■□□□□ 0.69
MUC1-220ENST00000498431 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.34■□□□□ 0.69
MUC1-220ENST00000498431 TACC3Q9Y6A5 838 aa19.34■□□□□ 0.69
MUC1-220ENST00000498431 ZBED9Q6R2W3 1325 aa19.33■□□□□ 0.69
MUC1-220ENST00000498431 CHD9Q3L8U1 2897 aa19.33■□□□□ 0.69
MUC1-220ENST00000498431 MUC3AQ02505 3323 aa19.33■□□□□ 0.69
MUC1-220ENST00000498431 ADAMTS4O75173 837 aa19.33■□□□□ 0.68
MUC1-220ENST00000498431 ATP5JP18859 108 aa19.33■□□□□ 0.68
MUC1-220ENST00000498431 KCTD2Q14681 263 aa19.33■□□□□ 0.68
MUC1-220ENST00000498431 RNF180Q86T96 592 aa19.33■□□□□ 0.68
MUC1-220ENST00000498431 RNPC3Q96LT9 517 aaKnown RBP19.33■□□□□ 0.68
MUC1-220ENST00000498431 NUP88Q99567 741 aaPredicted RBP19.33■□□□□ 0.68
MUC1-220ENST00000498431 HAUS7Q99871 368 aa19.33■□□□□ 0.68
MUC1-220ENST00000498431 KANSL2Q9H9L4 492 aa19.33■□□□□ 0.68
MUC1-220ENST00000498431 DIS3Q9Y2L1 958 aaKnown RBP19.33■□□□□ 0.68
MUC1-220ENST00000498431 KIAA0355O15063 1070 aa19.32■□□□□ 0.68
MUC1-220ENST00000498431 AKR1A1P14550 325 aa19.32■□□□□ 0.68
MUC1-220ENST00000498431 RPAP2Q8IXW5 612 aaPredicted RBP19.32■□□□□ 0.68
MUC1-220ENST00000498431 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.32■□□□□ 0.68
MUC1-220ENST00000498431 PUS7LQ9H0K6 701 aaKnown RBP19.32■□□□□ 0.68
MUC1-220ENST00000498431 GOPCQ9HD26 462 aa19.32■□□□□ 0.68
MUC1-220ENST00000498431 SLC4A4Q9Y6R1 1079 aa19.32■□□□□ 0.68
MUC1-220ENST00000498431 FOSL2P15408 326 aa19.31■□□□□ 0.68
MUC1-220ENST00000498431 RAG1P15918 1043 aa19.31■□□□□ 0.68
MUC1-220ENST00000498431 IRX5P78411 483 aaPredicted RBP19.31■□□□□ 0.68
MUC1-220ENST00000498431 UBE3CQ15386 1083 aa19.31■□□□□ 0.68
MUC1-220ENST00000498431 AMOTL1Q8IY63 956 aa19.31■□□□□ 0.68
MUC1-220ENST00000498431 ZBTB40Q9NUA8 1239 aa19.31■□□□□ 0.68
MUC1-220ENST00000498431 RIPK3Q9Y572 518 aa19.31■□□□□ 0.68
MUC1-220ENST00000498431 SYNRGQ9UMZ2 1314 aa19.3■□□□□ 0.68
MUC1-220ENST00000498431 RAB11FIP3O75154 756 aa19.3■□□□□ 0.68
MUC1-220ENST00000498431 HMMRO75330 724 aa19.3■□□□□ 0.68
MUC1-220ENST00000498431 SNAI1O95863 264 aaPredicted RBP19.3■□□□□ 0.68
MUC1-220ENST00000498431 FAAP100Q0VG06 881 aa19.3■□□□□ 0.68
MUC1-220ENST00000498431 STK11IPQ8N1F8 1099 aa19.3■□□□□ 0.68
MUC1-220ENST00000498431 TMEM39AQ9NV64 488 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms