RNA–Protein interactions for RNA: ENST00000498058.1

PRKCB-209, Transcript of protein kinase C beta, humanhuman

TSL 3 BASIC

Gene PRKCB, Length 480 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-209ENST00000498058 SH2D4AQ9H788 454 aa22.25■■□□□ 1.15
PRKCB-209ENST00000498058 EPB41L4AQ9HCS5 686 aaPredicted RBP22.25■■□□□ 1.15
PRKCB-209ENST00000498058 SBK1Q52WX2 424 aa22.24■■□□□ 1.15
PRKCB-209ENST00000498058 GJC2Q5T442 439 aaPredicted RBP22.24■■□□□ 1.15
PRKCB-209ENST00000498058 AMOTL1Q8IY63 956 aa22.24■■□□□ 1.15
PRKCB-209ENST00000498058 REPS2Q8NFH8 660 aa22.24■■□□□ 1.15
PRKCB-209ENST00000498058 MROH8Q9H579 483 aa22.24■■□□□ 1.15
PRKCB-209ENST00000498058 ARPP21Q9UBL0 812 aaPredicted RBP22.24■■□□□ 1.15
PRKCB-209ENST00000498058 PLXNA1Q9UIW2 1896 aa22.24■■□□□ 1.15
PRKCB-209ENST00000498058 M0R2C6 588 aa22.23■■□□□ 1.15
PRKCB-209ENST00000498058 MSCO60682 206 aa22.23■■□□□ 1.15
PRKCB-209ENST00000498058 ATN1P54259 1190 aaPredicted RBP22.23■■□□□ 1.15
PRKCB-209ENST00000498058 MDM2Q00987 491 aaPredicted RBP22.23■■□□□ 1.15
PRKCB-209ENST00000498058 FAM83BQ5T0W9 1011 aa22.23■■□□□ 1.15
PRKCB-209ENST00000498058 ABRAQ8N0Z2 381 aa22.23■■□□□ 1.15
PRKCB-209ENST00000498058 APPBP2Q92624 585 aa22.23■■□□□ 1.15
PRKCB-209ENST00000498058 DDRGK1Q96HY6 314 aa22.23■■□□□ 1.15
PRKCB-209ENST00000498058 MAML3Q96JK9 1138 aa22.23■■□□□ 1.15
PRKCB-209ENST00000498058 NUP88Q99567 741 aaPredicted RBP22.23■■□□□ 1.15
PRKCB-209ENST00000498058 PCDHB15Q9Y5E8 787 aa22.23■■□□□ 1.15
PRKCB-209ENST00000498058 DNM1LO00429 736 aa22.22■■□□□ 1.15
PRKCB-209ENST00000498058 VWA5AO00534 786 aa22.22■■□□□ 1.15
PRKCB-209ENST00000498058 RNF113AO15541 343 aaKnown RBP22.22■■□□□ 1.15
PRKCB-209ENST00000498058 TDHQ8IZJ6 230 aa22.22■■□□□ 1.15
PRKCB-209ENST00000498058 OTUD7AQ8TE49 926 aaPredicted RBP22.22■■□□□ 1.15
PRKCB-209ENST00000498058 UBE2OQ9C0C9 1292 aaKnown RBP22.22■■□□□ 1.15
PRKCB-209ENST00000498058 ZNF214Q9UL59 606 aaPredicted RBP22.22■■□□□ 1.15
PRKCB-209ENST00000498058 PPP1R9AQ9ULJ8 1098 aa22.22■■□□□ 1.15
PRKCB-209ENST00000498058 COL6A3P12111 3177 aa22.22■■□□□ 1.15
PRKCB-209ENST00000498058 MINDY4BA8MYZ0 360 aa22.21■■□□□ 1.15
PRKCB-209ENST00000498058 GPAA1O43292 621 aa22.21■■□□□ 1.15
PRKCB-209ENST00000498058 PGK2P07205 417 aa22.21■■□□□ 1.15
PRKCB-209ENST00000498058 LRIT3Q3SXY7 679 aa22.21■■□□□ 1.15
PRKCB-209ENST00000498058 RIOX2Q8IUF8 465 aa22.21■■□□□ 1.15
PRKCB-209ENST00000498058 ROBO3Q96MS0 1386 aa22.21■■□□□ 1.15
PRKCB-209ENST00000498058 MYH4Q9Y623 1939 aa22.21■■□□□ 1.15
PRKCB-209ENST00000498058 IGKV6D-41A0A0C4DH26 115 aa22.2■■□□□ 1.14
PRKCB-209ENST00000498058 SEPT4O43236 478 aa22.2■■□□□ 1.14
PRKCB-209ENST00000498058 RAD21O60216 631 aa22.2■■□□□ 1.14
PRKCB-209ENST00000498058 FCER1AP12319 257 aa22.2■■□□□ 1.14
PRKCB-209ENST00000498058 GIMAP6Q6P9H5 292 aa22.2■■□□□ 1.14
PRKCB-209ENST00000498058 SEC62Q99442 399 aaKnown RBP22.2■■□□□ 1.14
PRKCB-209ENST00000498058 GOPCQ9HD26 462 aa22.2■■□□□ 1.14
PRKCB-209ENST00000498058 LTBP2Q14767 1821 aa22.2■■□□□ 1.14
PRKCB-209ENST00000498058 SLC25A27O95847 323 aa22.19■■□□□ 1.14
PRKCB-209ENST00000498058 TAL1P17542 331 aaPredicted RBP22.19■■□□□ 1.14
PRKCB-209ENST00000498058 STAT3P40763 770 aa22.19■■□□□ 1.14
PRKCB-209ENST00000498058 RTP1P59025 263 aa22.19■■□□□ 1.14
PRKCB-209ENST00000498058 ZNF792Q3KQV3 632 aa22.19■■□□□ 1.14
PRKCB-209ENST00000498058 Q7L0L9 218 aa22.19■■□□□ 1.14
PRKCB-209ENST00000498058 PI4K2BQ8TCG2 481 aa22.19■■□□□ 1.14
PRKCB-209ENST00000498058 MMP19Q99542 508 aa22.19■■□□□ 1.14
PRKCB-209ENST00000498058 NYAP2Q9P242 653 aa22.19■■□□□ 1.14
PRKCB-209ENST00000498058 PRDM1O75626 825 aa22.18■■□□□ 1.14
PRKCB-209ENST00000498058 NDUFB10O96000 172 aa22.18■■□□□ 1.14
PRKCB-209ENST00000498058 FAM47AQ5JRC9 791 aa22.18■■□□□ 1.14
PRKCB-209ENST00000498058 RIPK3Q9Y572 518 aa22.18■■□□□ 1.14
PRKCB-209ENST00000498058 F5H6K3 240 aa22.17■■□□□ 1.14
PRKCB-209ENST00000498058 KLRC3Q07444 240 aa22.17■■□□□ 1.14
PRKCB-209ENST00000498058 SLC39A5Q6ZMH5 540 aa22.17■■□□□ 1.14
PRKCB-209ENST00000498058 MKNK2Q9HBH9 465 aa22.17■■□□□ 1.14
PRKCB-209ENST00000498058 SLC5A4Q9NY91 659 aa22.17■■□□□ 1.14
PRKCB-209ENST00000498058 LRRC41Q15345 812 aa22.16■■□□□ 1.14
PRKCB-209ENST00000498058 ARRDC4Q8NCT1 418 aa22.16■■□□□ 1.14
PRKCB-209ENST00000498058 GPATCH3Q96I76 525 aa22.16■■□□□ 1.14
PRKCB-209ENST00000498058 CLIP2Q9UDT6 1046 aa22.16■■□□□ 1.14
PRKCB-209ENST00000498058 MYCNP04198 464 aaPredicted RBP22.15■■□□□ 1.14
PRKCB-209ENST00000498058 ZFYP08048 801 aaPredicted RBP22.15■■□□□ 1.14
PRKCB-209ENST00000498058 ADCYAP1R1P41586 468 aa22.15■■□□□ 1.14
PRKCB-209ENST00000498058 IFNL3Q8IZI9 196 aa22.15■■□□□ 1.14
PRKCB-209ENST00000498058 FERMT2Q96AC1 680 aa22.15■■□□□ 1.14
PRKCB-209ENST00000498058 SLF1Q9BQI6 1058 aa22.15■■□□□ 1.14
PRKCB-209ENST00000498058 TINF2Q9BSI4 451 aa22.15■■□□□ 1.14
PRKCB-209ENST00000498058 ATP11BQ9Y2G3 1177 aa22.15■■□□□ 1.14
PRKCB-209ENST00000498058 PATL2C9JE40 543 aaKnown RBP22.14■■□□□ 1.13
PRKCB-209ENST00000498058 FOXP2O15409 715 aa22.14■■□□□ 1.13
PRKCB-209ENST00000498058 ZNF865P0CJ78 1059 aaPredicted RBP22.14■■□□□ 1.13
PRKCB-209ENST00000498058 TDO2P48775 406 aa22.14■■□□□ 1.13
PRKCB-209ENST00000498058 KCTD2Q14681 263 aa22.14■■□□□ 1.13
PRKCB-209ENST00000498058 SNX17Q15036 470 aa22.14■■□□□ 1.13
PRKCB-209ENST00000498058 GPR153Q6NV75 609 aa22.14■■□□□ 1.13
PRKCB-209ENST00000498058 DEFB123Q8N688 67 aa22.14■■□□□ 1.13
PRKCB-209ENST00000498058 LENG1Q96BZ8 264 aaPredicted RBP22.14■■□□□ 1.13
PRKCB-209ENST00000498058 CEP95Q96GE4 821 aa22.14■■□□□ 1.13
PRKCB-209ENST00000498058 DIS3Q9Y2L1 958 aaKnown RBP22.14■■□□□ 1.13
PRKCB-209ENST00000498058 LAMA2P24043 3122 aaKnown RBP22.13■■□□□ 1.13
PRKCB-209ENST00000498058 TTC41PQ6P2S7 1318 aa22.13■■□□□ 1.13
PRKCB-209ENST00000498058 KBTBD13C9JR72 458 aa22.13■■□□□ 1.13
PRKCB-209ENST00000498058 APPP05067 770 aa22.13■■□□□ 1.13
PRKCB-209ENST00000498058 RRP1P56182 461 aaKnown RBP22.13■■□□□ 1.13
PRKCB-209ENST00000498058 TRIM60Q495X7 471 aa22.13■■□□□ 1.13
PRKCB-209ENST00000498058 MKL1Q969V6 931 aa22.13■■□□□ 1.13
PRKCB-209ENST00000498058 MTMR4Q9NYA4 1195 aa22.13■■□□□ 1.13
PRKCB-209ENST00000498058 SALL3Q9BXA9 1300 aa22.12■■□□□ 1.13
PRKCB-209ENST00000498058 GNAT2P19087 354 aa22.12■■□□□ 1.13
PRKCB-209ENST00000498058 SNRNP48Q6IEG0 339 aaKnown RBP22.12■■□□□ 1.13
PRKCB-209ENST00000498058 SH3RF1Q7Z6J0 888 aa22.12■■□□□ 1.13
PRKCB-209ENST00000498058 LRRC47Q8N1G4 583 aaKnown RBP22.12■■□□□ 1.13
PRKCB-209ENST00000498058 SUPT16HQ9Y5B9 1047 aaKnown RBP22.12■■□□□ 1.13
PRKCB-209ENST00000498058 MCM3APO60318 1980 aa22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms