RNA–Protein interactions for RNA: ENST00000498043.6

CHRNA4-206, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 5

Gene CHRNA4, Length 2,052 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-206ENST00000498043 ICA1Q05084 483 aa20.48■□□□□ 0.87
CHRNA4-206ENST00000498043 ASPRV1Q53RT3 343 aa20.48■□□□□ 0.87
CHRNA4-206ENST00000498043 WWC2Q6AWC2 1192 aa20.48■□□□□ 0.87
CHRNA4-206ENST00000498043 TMEM179Q6ZVK1 233 aa20.48■□□□□ 0.87
CHRNA4-206ENST00000498043 HEATR3Q7Z4Q2 680 aa20.48■□□□□ 0.87
CHRNA4-206ENST00000498043 CCAR1Q8IX12 1150 aaKnown RBP20.48■□□□□ 0.87
CHRNA4-206ENST00000498043 MICALL2Q8IY33 904 aa20.48■□□□□ 0.87
CHRNA4-206ENST00000498043 UBA5Q9GZZ9 404 aa20.48■□□□□ 0.87
CHRNA4-206ENST00000498043 GOLPH3LQ9H4A5 285 aa20.48■□□□□ 0.87
CHRNA4-206ENST00000498043 GRPEL1Q9HAV7 217 aa20.48■□□□□ 0.87
CHRNA4-206ENST00000498043 HERC5Q9UII4 1024 aaKnown RBP20.48■□□□□ 0.87
CHRNA4-206ENST00000498043 SRCAPQ6ZRS2 3230 aa20.48■□□□□ 0.87
CHRNA4-206ENST00000498043 RAD21O60216 631 aa20.47■□□□□ 0.87
CHRNA4-206ENST00000498043 TOB1P50616 345 aaPredicted RBP20.47■□□□□ 0.87
CHRNA4-206ENST00000498043 RRP1BQ14684 758 aaKnown RBP20.47■□□□□ 0.87
CHRNA4-206ENST00000498043 EARS2Q5JPH6 523 aaKnown RBP20.47■□□□□ 0.87
CHRNA4-206ENST00000498043 FKBP1CQ5VVH2 108 aa20.47■□□□□ 0.87
CHRNA4-206ENST00000498043 KANSL2Q9H9L4 492 aa20.47■□□□□ 0.87
CHRNA4-206ENST00000498043 CABP5Q9NP86 173 aa20.47■□□□□ 0.87
CHRNA4-206ENST00000498043 GPCPD1Q9NPB8 672 aa20.47■□□□□ 0.87
CHRNA4-206ENST00000498043 GH2P01242 217 aa20.47■□□□□ 0.87
CHRNA4-206ENST00000498043 MARCKSP29966 332 aaPredicted RBP20.47■□□□□ 0.87
CHRNA4-206ENST00000498043 JAG1P78504 1218 aa20.47■□□□□ 0.87
CHRNA4-206ENST00000498043 SLC39A14Q15043 492 aa20.47■□□□□ 0.87
CHRNA4-206ENST00000498043 PTPAQ15257 358 aa20.47■□□□□ 0.87
CHRNA4-206ENST00000498043 RILPL1Q5EBL4 403 aa20.47■□□□□ 0.87
CHRNA4-206ENST00000498043 PPP4R3BQ5MIZ7 849 aa20.47■□□□□ 0.87
CHRNA4-206ENST00000498043 TYW1BQ6NUM6 668 aa20.47■□□□□ 0.87
CHRNA4-206ENST00000498043 ARHGAP27Q6ZUM4 889 aa20.47■□□□□ 0.87
CHRNA4-206ENST00000498043 VAT1LQ9HCJ6 419 aa20.47■□□□□ 0.87
CHRNA4-206ENST00000498043 ATP2B1P20020 1258 aa20.46■□□□□ 0.87
CHRNA4-206ENST00000498043 CCDC96Q2M329 555 aa20.46■□□□□ 0.87
CHRNA4-206ENST00000498043 FSIP1Q8NA03 581 aa20.46■□□□□ 0.87
CHRNA4-206ENST00000498043 RRP36Q96EU6 259 aaKnown RBP20.46■□□□□ 0.87
CHRNA4-206ENST00000498043 NUP62CLQ9H1M0 184 aa20.46■□□□□ 0.87
CHRNA4-206ENST00000498043 ADAMTS3O15072 1205 aa20.46■□□□□ 0.87
CHRNA4-206ENST00000498043 MRE11P49959 708 aa20.46■□□□□ 0.87
CHRNA4-206ENST00000498043 ZNF543Q08ER8 600 aa20.46■□□□□ 0.87
CHRNA4-206ENST00000498043 CAMK4Q16566 473 aa20.46■□□□□ 0.87
CHRNA4-206ENST00000498043 NOM1Q5C9Z4 860 aaKnown RBP20.46■□□□□ 0.87
CHRNA4-206ENST00000498043 SAMD7Q7Z3H4 446 aa20.46■□□□□ 0.87
CHRNA4-206ENST00000498043 FAM83AQ86UY5 434 aa20.46■□□□□ 0.87
CHRNA4-206ENST00000498043 TNFRSF25Q93038 417 aa20.46■□□□□ 0.87
CHRNA4-206ENST00000498043 SH3GLB2Q9NR46 395 aa20.46■□□□□ 0.87
CHRNA4-206ENST00000498043 SEC63Q9UGP8 760 aaKnown RBP20.46■□□□□ 0.87
CHRNA4-206ENST00000498043 DICER1Q9UPY3 1922 aaKnown RBP20.45■□□□□ 0.87
CHRNA4-206ENST00000498043 STXBP3O00186 592 aa20.45■□□□□ 0.86
CHRNA4-206ENST00000498043 TBC1D10BQ4KMP7 808 aaPredicted RBP20.45■□□□□ 0.86
CHRNA4-206ENST00000498043 ADALQ6DHV7 355 aa20.45■□□□□ 0.86
CHRNA4-206ENST00000498043 CCDC73Q6ZRK6 1079 aa20.45■□□□□ 0.86
CHRNA4-206ENST00000498043 MRPS27Q92552 414 aaKnown RBP20.45■□□□□ 0.86
CHRNA4-206ENST00000498043 PIGSQ96S52 555 aa20.45■□□□□ 0.86
CHRNA4-206ENST00000498043 DDX19AQ9NUU7 478 aaKnown RBP20.45■□□□□ 0.86
CHRNA4-206ENST00000498043 BARHL2Q9NY43 387 aa20.45■□□□□ 0.86
CHRNA4-206ENST00000498043 NYAP2Q9P242 653 aa20.45■□□□□ 0.86
CHRNA4-206ENST00000498043 PCDHB6Q9Y5E3 794 aa20.45■□□□□ 0.86
CHRNA4-206ENST00000498043 KCTD1Q719H9 257 aa20.44■□□□□ 0.86
CHRNA4-206ENST00000498043 CNOT7Q9UIV1 285 aaKnown RBP20.44■□□□□ 0.86
CHRNA4-206ENST00000498043 XRCC6P12956 609 aaKnown RBP eCLIP20.44■□□□□ 0.86
CHRNA4-206ENST00000498043 CALML3P27482 149 aa20.44■□□□□ 0.86
CHRNA4-206ENST00000498043 MIGA2Q7L4E1 593 aa20.44■□□□□ 0.86
CHRNA4-206ENST00000498043 CCDC148Q8NFR7 591 aa20.44■□□□□ 0.86
CHRNA4-206ENST00000498043 ASTN2O75129 1339 aaPredicted RBP20.43■□□□□ 0.86
CHRNA4-206ENST00000498043 A0A1W2PQ27 194 aa20.43■□□□□ 0.86
CHRNA4-206ENST00000498043 A0A1W2PQ64 194 aa20.43■□□□□ 0.86
CHRNA4-206ENST00000498043 A0A1W2PQD8 194 aa20.43■□□□□ 0.86
CHRNA4-206ENST00000498043 LETM1O95202 739 aaPredicted RBP20.43■□□□□ 0.86
CHRNA4-206ENST00000498043 SMARCA1P28370 1054 aa20.43■□□□□ 0.86
CHRNA4-206ENST00000498043 TTBK2Q6IQ55 1244 aa20.43■□□□□ 0.86
CHRNA4-206ENST00000498043 SIAH1Q8IUQ4 282 aa20.43■□□□□ 0.86
CHRNA4-206ENST00000498043 DPF2Q92785 391 aa20.43■□□□□ 0.86
CHRNA4-206ENST00000498043 TNMDQ9H2S6 317 aa20.43■□□□□ 0.86
CHRNA4-206ENST00000498043 CLSTN2Q9H4D0 955 aa20.43■□□□□ 0.86
CHRNA4-206ENST00000498043 RIOX1Q9H6W3 641 aa20.43■□□□□ 0.86
CHRNA4-206ENST00000498043 PPP6R2O75170 966 aa20.42■□□□□ 0.86
CHRNA4-206ENST00000498043 TNNI2P48788 182 aa20.42■□□□□ 0.86
CHRNA4-206ENST00000498043 MMP14P50281 582 aa20.42■□□□□ 0.86
CHRNA4-206ENST00000498043 AXDND1Q5T1B0 1012 aaPredicted RBP20.42■□□□□ 0.86
CHRNA4-206ENST00000498043 PIK3AP1Q6ZUJ8 805 aa20.42■□□□□ 0.86
CHRNA4-206ENST00000498043 BLIDQ8IZY5 108 aa20.42■□□□□ 0.86
CHRNA4-206ENST00000498043 JMYQ8N9B5 988 aa20.42■□□□□ 0.86
CHRNA4-206ENST00000498043 MKL1Q969V6 931 aa20.42■□□□□ 0.86
CHRNA4-206ENST00000498043 TSPY26PQ9H489 355 aa20.42■□□□□ 0.86
CHRNA4-206ENST00000498043 PCDHA4Q9UN74 947 aa20.42■□□□□ 0.86
CHRNA4-206ENST00000498043 SBF1O95248 1867 aa20.42■□□□□ 0.86
CHRNA4-206ENST00000498043 A0A1B0GVL5 298 aa20.42■□□□□ 0.86
CHRNA4-206ENST00000498043 LMNB1P20700 586 aa20.42■□□□□ 0.86
CHRNA4-206ENST00000498043 SLC16A2P36021 539 aa20.42■□□□□ 0.86
CHRNA4-206ENST00000498043 NAPAP54920 295 aa20.42■□□□□ 0.86
CHRNA4-206ENST00000498043 FAM160A1Q05DH4 1040 aa20.42■□□□□ 0.86
CHRNA4-206ENST00000498043 RASA3Q14644 834 aa20.42■□□□□ 0.86
CHRNA4-206ENST00000498043 KIF4BQ2VIQ3 1234 aa20.42■□□□□ 0.86
CHRNA4-206ENST00000498043 GPATCH4Q5T3I0 446 aaKnown RBP20.42■□□□□ 0.86
CHRNA4-206ENST00000498043 RASGRP4Q8TDF6 673 aa20.42■□□□□ 0.86
CHRNA4-206ENST00000498043 PANK2Q9BZ23 570 aa20.42■□□□□ 0.86
CHRNA4-206ENST00000498043 RBSNQ9H1K0 784 aa20.42■□□□□ 0.86
CHRNA4-206ENST00000498043 NOL7Q9UMY1 257 aaKnown RBP20.42■□□□□ 0.86
CHRNA4-206ENST00000498043 SLFN13Q68D06 897 aa20.41■□□□□ 0.86
CHRNA4-206ENST00000498043 PGAP2Q9UHJ9 254 aa20.41■□□□□ 0.86
CHRNA4-206ENST00000498043 WNT7AO00755 349 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms