RNA–Protein interactions for RNA: ENST00000497978.1

NUDCD3-211, Transcript of NudC domain containing 3, humanhuman

TSL 4

Gene NUDCD3, Length 659 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-211ENST00000497978 TSHZ3Q63HK5 1081 aa14.07□□□□□ -0.16
NUDCD3-211ENST00000497978 OLFML2BQ68BL8 750 aa14.07□□□□□ -0.16
NUDCD3-211ENST00000497978 NCAPG2Q86XI2 1143 aa14.07□□□□□ -0.16
NUDCD3-211ENST00000497978 NPLOC4Q8TAT6 608 aa14.07□□□□□ -0.16
NUDCD3-211ENST00000497978 OSBP2Q969R2 916 aa14.07□□□□□ -0.16
NUDCD3-211ENST00000497978 ATG4CQ96DT6 458 aa14.07□□□□□ -0.16
NUDCD3-211ENST00000497978 PRO3102Q9H379 93 aa14.07□□□□□ -0.16
NUDCD3-211ENST00000497978 ZNF287Q9HBT7 754 aa14.07□□□□□ -0.16
NUDCD3-211ENST00000497978 STAP2Q9UGK3 403 aa14.07□□□□□ -0.16
NUDCD3-211ENST00000497978 DDX20Q9UHI6 824 aaKnown RBP14.07□□□□□ -0.16
NUDCD3-211ENST00000497978 ALPK3Q96L96 1907 aa14.07□□□□□ -0.16
NUDCD3-211ENST00000497978 GPAA1O43292 621 aa14.06□□□□□ -0.16
NUDCD3-211ENST00000497978 SLC25A27O95847 323 aa14.06□□□□□ -0.16
NUDCD3-211ENST00000497978 CYP2C19P33261 490 aa14.06□□□□□ -0.16
NUDCD3-211ENST00000497978 TDO2P48775 406 aa14.06□□□□□ -0.16
NUDCD3-211ENST00000497978 ABRAQ8N0Z2 381 aa14.06□□□□□ -0.16
NUDCD3-211ENST00000497978 ZMYND8Q9ULU4 1186 aaPredicted RBP14.06□□□□□ -0.16
NUDCD3-211ENST00000497978 A0A0G2JMZ2 1700 aa14.06□□□□□ -0.16
NUDCD3-211ENST00000497978 RLFQ13129 1914 aa14.05□□□□□ -0.16
NUDCD3-211ENST00000497978 COL6A1P12109 1028 aa14.05□□□□□ -0.16
NUDCD3-211ENST00000497978 FCER1AP12319 257 aa14.05□□□□□ -0.16
NUDCD3-211ENST00000497978 ZNF444Q8N0Y2 327 aaPredicted RBP14.05□□□□□ -0.16
NUDCD3-211ENST00000497978 STK11IPQ8N1F8 1099 aa14.05□□□□□ -0.16
NUDCD3-211ENST00000497978 NACAP1Q9BZK3 213 aa14.05□□□□□ -0.16
NUDCD3-211ENST00000497978 PCDHB15Q9Y5E8 787 aa14.05□□□□□ -0.16
NUDCD3-211ENST00000497978 ZNF236Q9UL36 1845 aa14.05□□□□□ -0.16
NUDCD3-211ENST00000497978 PFASO15067 1338 aa14.05□□□□□ -0.16
NUDCD3-211ENST00000497978 PATL2C9JE40 543 aaKnown RBP14.04□□□□□ -0.16
NUDCD3-211ENST00000497978 COBLO75128 1261 aa14.04□□□□□ -0.16
NUDCD3-211ENST00000497978 CYBAP13498 195 aa14.04□□□□□ -0.16
NUDCD3-211ENST00000497978 RASA1P20936 1047 aa14.04□□□□□ -0.16
NUDCD3-211ENST00000497978 BMP8BP34820 402 aa14.04□□□□□ -0.16
NUDCD3-211ENST00000497978 COPB2P35606 906 aa14.04□□□□□ -0.16
NUDCD3-211ENST00000497978 TMEM132BQ14DG7 1078 aa14.04□□□□□ -0.16
NUDCD3-211ENST00000497978 FAM83BQ5T0W9 1011 aa14.04□□□□□ -0.16
NUDCD3-211ENST00000497978 FSD1Q9BTV5 496 aa14.04□□□□□ -0.16
NUDCD3-211ENST00000497978 NYAP2Q9P242 653 aa14.04□□□□□ -0.16
NUDCD3-211ENST00000497978 PPP1R9AQ9ULJ8 1098 aa14.04□□□□□ -0.16
NUDCD3-211ENST00000497978 ADAMTS5Q9UNA0 930 aa14.04□□□□□ -0.16
NUDCD3-211ENST00000497978 ROBO3Q96MS0 1386 aa14.04□□□□□ -0.16
NUDCD3-211ENST00000497978 M0R2C6 588 aa14.03□□□□□ -0.16
NUDCD3-211ENST00000497978 VWA5AO00534 786 aa14.03□□□□□ -0.16
NUDCD3-211ENST00000497978 SLC3A2P08195 630 aaKnown RBP14.03□□□□□ -0.16
NUDCD3-211ENST00000497978 SYN1P17600 705 aa14.03□□□□□ -0.16
NUDCD3-211ENST00000497978 STAT3P40763 770 aa14.03□□□□□ -0.16
NUDCD3-211ENST00000497978 RRP1P56182 461 aaKnown RBP14.03□□□□□ -0.16
NUDCD3-211ENST00000497978 KCTD2Q14681 263 aa14.03□□□□□ -0.16
NUDCD3-211ENST00000497978 RIOX2Q8IUF8 465 aa14.03□□□□□ -0.16
NUDCD3-211ENST00000497978 ARRDC4Q8NCT1 418 aa14.03□□□□□ -0.16
NUDCD3-211ENST00000497978 MMP19Q99542 508 aa14.03□□□□□ -0.16
NUDCD3-211ENST00000497978 GDF15Q99988 308 aa14.03□□□□□ -0.16
NUDCD3-211ENST00000497978 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.03□□□□□ -0.16
NUDCD3-211ENST00000497978 SENP6Q9GZR1 1112 aaPredicted RBP14.03□□□□□ -0.16
NUDCD3-211ENST00000497978 FBXO28Q9NVF7 368 aa14.03□□□□□ -0.16
NUDCD3-211ENST00000497978 PARP14Q460N5 1801 aa14.03□□□□□ -0.16
NUDCD3-211ENST00000497978 FRMPD3Q5JV73 1810 aa14.03□□□□□ -0.16
NUDCD3-211ENST00000497978 DNM1LO00429 736 aa14.02□□□□□ -0.17
NUDCD3-211ENST00000497978 IGHA2P01877 340 aa14.02□□□□□ -0.17
NUDCD3-211ENST00000497978 MX1P20591 662 aa14.02□□□□□ -0.17
NUDCD3-211ENST00000497978 PDE4BQ07343 736 aa14.02□□□□□ -0.17
NUDCD3-211ENST00000497978 LRRC26Q2I0M4 334 aa14.02□□□□□ -0.17
NUDCD3-211ENST00000497978 IFNL3Q8IZI9 196 aa14.02□□□□□ -0.17
NUDCD3-211ENST00000497978 TRPV1Q8NER1 839 aa14.02□□□□□ -0.17
NUDCD3-211ENST00000497978 PI4K2BQ8TCG2 481 aa14.02□□□□□ -0.17
NUDCD3-211ENST00000497978 SLF1Q9BQI6 1058 aa14.02□□□□□ -0.17
NUDCD3-211ENST00000497978 EPB41L4AQ9HCS5 686 aaPredicted RBP14.02□□□□□ -0.17
NUDCD3-211ENST00000497978 CLIP2Q9UDT6 1046 aa14.02□□□□□ -0.17
NUDCD3-211ENST00000497978 CTDP1Q9Y5B0 961 aaPredicted RBP14.02□□□□□ -0.17
NUDCD3-211ENST00000497978 KBTBD13C9JR72 458 aa14.01□□□□□ -0.17
NUDCD3-211ENST00000497978 F5H6K3 240 aa14.01□□□□□ -0.17
NUDCD3-211ENST00000497978 SEPT4O43236 478 aa14.01□□□□□ -0.17
NUDCD3-211ENST00000497978 MAGEA10P43363 369 aaPredicted RBP14.01□□□□□ -0.17
NUDCD3-211ENST00000497978 KLRC3Q07444 240 aa14.01□□□□□ -0.17
NUDCD3-211ENST00000497978 MAML3Q96JK9 1138 aa14.01□□□□□ -0.17
NUDCD3-211ENST00000497978 NAPBQ9H115 298 aa14.01□□□□□ -0.17
NUDCD3-211ENST00000497978 GREB1LQ9C091 1923 aaPredicted RBP14.01□□□□□ -0.17
NUDCD3-211ENST00000497978 COL11A1P12107 1806 aaPredicted RBP14.01□□□□□ -0.17
NUDCD3-211ENST00000497978 ZNFX1Q9P2E3 1918 aaKnown RBP14□□□□□ -0.17
NUDCD3-211ENST00000497978 PRDM1O75626 825 aa14□□□□□ -0.17
NUDCD3-211ENST00000497978 TTLL1O95922 423 aa14□□□□□ -0.17
NUDCD3-211ENST00000497978 NDUFB10O96000 172 aa14□□□□□ -0.17
NUDCD3-211ENST00000497978 TSPY3P0CV98 308 aa14□□□□□ -0.17
NUDCD3-211ENST00000497978 TSPY8P0CW00 308 aa14□□□□□ -0.17
NUDCD3-211ENST00000497978 ZMYM1Q5SVZ6 1142 aa14□□□□□ -0.17
NUDCD3-211ENST00000497978 ANKRD45Q5TZF3 282 aa14□□□□□ -0.17
NUDCD3-211ENST00000497978 PRPF38AQ8NAV1 312 aaKnown RBP14□□□□□ -0.17
NUDCD3-211ENST00000497978 OTUD7AQ8TE49 926 aaPredicted RBP14□□□□□ -0.17
NUDCD3-211ENST00000497978 SEC62Q99442 399 aaKnown RBP14□□□□□ -0.17
NUDCD3-211ENST00000497978 NUP88Q99567 741 aaPredicted RBP14□□□□□ -0.17
NUDCD3-211ENST00000497978 TEX13BQ9BXU2 312 aa14□□□□□ -0.17
NUDCD3-211ENST00000497978 UBE2OQ9C0C9 1292 aaKnown RBP14□□□□□ -0.17
NUDCD3-211ENST00000497978 NRBP1Q9UHY1 535 aa14□□□□□ -0.17
NUDCD3-211ENST00000497978 ZNF214Q9UL59 606 aaPredicted RBP14□□□□□ -0.17
NUDCD3-211ENST00000497978 SYNPO2Q9UMS6 1093 aa14□□□□□ -0.17
NUDCD3-211ENST00000497978 DIS3Q9Y2L1 958 aaKnown RBP14□□□□□ -0.17
NUDCD3-211ENST00000497978 IGKV6D-41A0A0C4DH26 115 aa13.99□□□□□ -0.17
NUDCD3-211ENST00000497978 ZBED4O75132 1171 aa13.99□□□□□ -0.17
NUDCD3-211ENST00000497978 PGK2P07205 417 aa13.99□□□□□ -0.17
NUDCD3-211ENST00000497978 ATN1P54259 1190 aaPredicted RBP13.99□□□□□ -0.17
NUDCD3-211ENST00000497978 PPP4R3BQ5MIZ7 849 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms