RNA–Protein interactions for RNA: ENST00000497873.1

PAXBP1-209, Transcript of PAX3 and PAX7 binding protein 1, humanhuman

TSL 2

Gene PAXBP1, Length 2,277 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAXBP1-209ENST00000497873 CCDC181Q5TID7 509 aa8.33□□□□□ -1.08
PAXBP1-209ENST00000497873 SMYD4Q8IYR2 804 aaPredicted RBP8.33□□□□□ -1.08
PAXBP1-209ENST00000497873 OSBP2Q969R2 916 aa8.33□□□□□ -1.08
PAXBP1-209ENST00000497873 MRPL4Q9BYD3 311 aaKnown RBP8.33□□□□□ -1.08
PAXBP1-209ENST00000497873 ACTL7BQ9Y614 415 aa8.33□□□□□ -1.08
PAXBP1-209ENST00000497873 FANCD2Q9BXW9 1451 aa8.33□□□□□ -1.08
PAXBP1-209ENST00000497873 DGKGP49619 791 aa8.33□□□□□ -1.08
PAXBP1-209ENST00000497873 SUMO1P63165 101 aaKnown RBP8.33□□□□□ -1.08
PAXBP1-209ENST00000497873 LYPD4Q6UWN0 246 aa8.33□□□□□ -1.08
PAXBP1-209ENST00000497873 ARMCX6Q7L4S7 300 aa8.33□□□□□ -1.08
PAXBP1-209ENST00000497873 FMNL3Q8IVF7 1028 aa8.33□□□□□ -1.08
PAXBP1-209ENST00000497873 AKT3Q9Y243 479 aa8.33□□□□□ -1.08
PAXBP1-209ENST00000497873 AUHQ13825 339 aaKnown RBP8.32□□□□□ -1.08
PAXBP1-209ENST00000497873 ANKRD39Q53RE8 183 aa8.32□□□□□ -1.08
PAXBP1-209ENST00000497873 C7orf61Q8IZ16 206 aa8.32□□□□□ -1.08
PAXBP1-209ENST00000497873 SLC16A10Q8TF71 515 aa8.32□□□□□ -1.08
PAXBP1-209ENST00000497873 RRAGCQ9HB90 399 aa8.32□□□□□ -1.08
PAXBP1-209ENST00000497873 WHRNQ9P202 907 aa8.32□□□□□ -1.08
PAXBP1-209ENST00000497873 MCM8Q9UJA3 840 aa8.32□□□□□ -1.08
PAXBP1-209ENST00000497873 MAPRE3Q9UPY8 281 aa8.32□□□□□ -1.08
PAXBP1-209ENST00000497873 TERTO14746 1132 aaKnown RBP8.32□□□□□ -1.08
PAXBP1-209ENST00000497873 SHOXO15266 292 aa8.32□□□□□ -1.08
PAXBP1-209ENST00000497873 CAPNS1P04632 268 aa8.32□□□□□ -1.08
PAXBP1-209ENST00000497873 RAC1P63000 192 aa8.32□□□□□ -1.08
PAXBP1-209ENST00000497873 EXOSC10Q01780 885 aaKnown RBP8.32□□□□□ -1.08
PAXBP1-209ENST00000497873 HSP90AB2PQ58FF8 381 aa8.32□□□□□ -1.08
PAXBP1-209ENST00000497873 CEP131Q9UPN4 1083 aa8.32□□□□□ -1.08
PAXBP1-209ENST00000497873 FAN1Q9Y2M0 1017 aa8.32□□□□□ -1.08
PAXBP1-209ENST00000497873 THRAP3Q9Y2W1 955 aaKnown RBP8.32□□□□□ -1.08
PAXBP1-209ENST00000497873 TIAF1O95411 115 aa8.31□□□□□ -1.08
PAXBP1-209ENST00000497873 CELA2BP08218 269 aaPredicted RBP8.31□□□□□ -1.08
PAXBP1-209ENST00000497873 HOXB4P17483 251 aaPredicted RBP8.31□□□□□ -1.08
PAXBP1-209ENST00000497873 ATL2Q8NHH9 583 aa8.31□□□□□ -1.08
PAXBP1-209ENST00000497873 BTN2A2Q8WVV5 523 aa8.31□□□□□ -1.08
PAXBP1-209ENST00000497873 MRGPRX3Q96LB0 322 aa8.31□□□□□ -1.08
PAXBP1-209ENST00000497873 GSX1Q9H4S2 264 aaPredicted RBP8.31□□□□□ -1.08
PAXBP1-209ENST00000497873 GP6Q9HCN6 339 aa8.31□□□□□ -1.08
PAXBP1-209ENST00000497873 MAGEC2Q9UBF1 373 aaPredicted RBP8.31□□□□□ -1.08
PAXBP1-209ENST00000497873 NDOR1Q9UHB4 597 aa8.31□□□□□ -1.08
PAXBP1-209ENST00000497873 SFMBT1Q9UHJ3 866 aa8.31□□□□□ -1.08
PAXBP1-209ENST00000497873 LRIG2O94898 1065 aa8.31□□□□□ -1.08
PAXBP1-209ENST00000497873 SLURP2P0DP57 97 aa8.31□□□□□ -1.08
PAXBP1-209ENST00000497873 FDX2Q6P4F2 183 aa8.31□□□□□ -1.08
PAXBP1-209ENST00000497873 STRA8Q7Z7C7 330 aa8.31□□□□□ -1.08
PAXBP1-209ENST00000497873 CDH24Q86UP0 819 aa8.31□□□□□ -1.08
PAXBP1-209ENST00000497873 MFSD2AQ8NA29 543 aa8.31□□□□□ -1.08
PAXBP1-209ENST00000497873 C2CD4AQ8NCU7 369 aaPredicted RBP8.31□□□□□ -1.08
PAXBP1-209ENST00000497873 RIN3Q8TB24 985 aa8.31□□□□□ -1.08
PAXBP1-209ENST00000497873 SLC7A14Q8TBB6 771 aa8.31□□□□□ -1.08
PAXBP1-209ENST00000497873 LEO1Q8WVC0 666 aaPredicted RBP8.31□□□□□ -1.08
PAXBP1-209ENST00000497873 BRF1Q92994 677 aa8.31□□□□□ -1.08
PAXBP1-209ENST00000497873 KREMEN1Q96MU8 473 aa8.31□□□□□ -1.08
PAXBP1-209ENST00000497873 LRRC4BQ9NT99 713 aa8.31□□□□□ -1.08
PAXBP1-209ENST00000497873 CUX2O14529 1486 aa8.3□□□□□ -1.08
PAXBP1-209ENST00000497873 MRC2Q9UBG0 1479 aa8.3□□□□□ -1.08
PAXBP1-209ENST00000497873 DNAJC25-GNG10A0A024R161 153 aa8.3□□□□□ -1.08
PAXBP1-209ENST00000497873 BLACEA4D250 179 aa8.3□□□□□ -1.08
PAXBP1-209ENST00000497873 SF1Q15637 639 aaKnown RBP8.3□□□□□ -1.08
PAXBP1-209ENST00000497873 AGGF1Q8N302 714 aaeCLIP8.3□□□□□ -1.08
PAXBP1-209ENST00000497873 AFAP1L2Q8N4X5 818 aa8.3□□□□□ -1.08
PAXBP1-209ENST00000497873 DNAJB8Q8NHS0 232 aa8.3□□□□□ -1.08
PAXBP1-209ENST00000497873 IRF7Q92985 503 aa8.3□□□□□ -1.08
PAXBP1-209ENST00000497873 VWCEQ96DN2 955 aa8.3□□□□□ -1.08
PAXBP1-209ENST00000497873 INTS7Q9NVH2 962 aaKnown RBP8.3□□□□□ -1.08
PAXBP1-209ENST00000497873 FBXL21Q9UKT6 434 aa8.3□□□□□ -1.08
PAXBP1-209ENST00000497873 PCOLCE2Q9UKZ9 415 aa8.3□□□□□ -1.08
PAXBP1-209ENST00000497873 EMC9Q9Y3B6 208 aa8.3□□□□□ -1.08
PAXBP1-209ENST00000497873 ARID4BQ4LE39 1312 aaPredicted RBP8.3□□□□□ -1.08
PAXBP1-209ENST00000497873 DNMBPQ6XZF7 1577 aa8.3□□□□□ -1.08
PAXBP1-209ENST00000497873 DNAJC8O75937 253 aaPredicted RBP8.29□□□□□ -1.08
PAXBP1-209ENST00000497873 KCNH1O95259 989 aa8.29□□□□□ -1.08
PAXBP1-209ENST00000497873 C6orf222P0C671 652 aaPredicted RBP8.29□□□□□ -1.08
PAXBP1-209ENST00000497873 ITGA4P13612 1032 aa8.29□□□□□ -1.08
PAXBP1-209ENST00000497873 TRIM59Q8IWR1 403 aa8.29□□□□□ -1.08
PAXBP1-209ENST00000497873 RAVER1Q8IY67 606 aaKnown RBP8.29□□□□□ -1.08
PAXBP1-209ENST00000497873 DDX1Q92499 740 aaKnown RBP8.29□□□□□ -1.08
PAXBP1-209ENST00000497873 TRIM11Q96F44 468 aa8.29□□□□□ -1.08
PAXBP1-209ENST00000497873 MIPEPQ99797 713 aa8.29□□□□□ -1.08
PAXBP1-209ENST00000497873 SLC52A2Q9HAB3 445 aa8.29□□□□□ -1.08
PAXBP1-209ENST00000497873 LGR6Q9HBX8 967 aa8.29□□□□□ -1.08
PAXBP1-209ENST00000497873 KRBA1A5PL33 1030 aa8.29□□□□□ -1.08
PAXBP1-209ENST00000497873 FAM229AH3BQW9 127 aa8.29□□□□□ -1.08
PAXBP1-209ENST00000497873 RBAK-RBAKDNI3L0D1 243 aa8.29□□□□□ -1.08
PAXBP1-209ENST00000497873 PPP2R5DQ14738 602 aa8.29□□□□□ -1.08
PAXBP1-209ENST00000497873 NOL9Q5SY16 702 aaKnown RBP8.29□□□□□ -1.08
PAXBP1-209ENST00000497873 WWC2Q6AWC2 1192 aa8.29□□□□□ -1.08
PAXBP1-209ENST00000497873 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.29□□□□□ -1.08
PAXBP1-209ENST00000497873 RCC1LQ96I51 464 aaKnown RBP8.29□□□□□ -1.08
PAXBP1-209ENST00000497873 PCGF6Q9BYE7 350 aa8.29□□□□□ -1.08
PAXBP1-209ENST00000497873 TRIM39Q9HCM9 518 aa8.29□□□□□ -1.08
PAXBP1-209ENST00000497873 COL17A1Q9UMD9 1497 aaPredicted RBP8.29□□□□□ -1.08
PAXBP1-209ENST00000497873 WASHC2CQ9Y4E1 1318 aa8.28□□□□□ -1.08
PAXBP1-209ENST00000497873 FAM83GA6ND36 823 aa8.28□□□□□ -1.08
PAXBP1-209ENST00000497873 ALG1L2C9J202 215 aa8.28□□□□□ -1.08
PAXBP1-209ENST00000497873 DLX3O60479 287 aa8.28□□□□□ -1.08
PAXBP1-209ENST00000497873 LETMD1Q6P1Q0 360 aa8.28□□□□□ -1.08
PAXBP1-209ENST00000497873 DDX46Q7L014 1031 aaKnown RBP8.28□□□□□ -1.08
PAXBP1-209ENST00000497873 BRAPQ7Z569 592 aa8.28□□□□□ -1.08
PAXBP1-209ENST00000497873 ARHGEF39Q8N4T4 335 aa8.28□□□□□ -1.08
PAXBP1-209ENST00000497873 MRPL18Q9H0U6 180 aaKnown RBP8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms