RNA–Protein interactions for RNA: ENST00000497069.2

PMF1-205, Transcript of polyamine modulated factor 1, humanhuman

TSL 3

Gene PMF1, Length 837 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-205ENST00000497069 CCDC96Q2M329 555 aa18.54■□□□□ 0.56
PMF1-205ENST00000497069 SYNE3Q6ZMZ3 975 aa18.54■□□□□ 0.56
PMF1-205ENST00000497069 CATSPERGQ6ZRH7 1159 aa18.54■□□□□ 0.56
PMF1-205ENST00000497069 SMCR8Q8TEV9 937 aaPredicted RBP18.54■□□□□ 0.56
PMF1-205ENST00000497069 TCEANC2Q96MN5 208 aa18.54■□□□□ 0.56
PMF1-205ENST00000497069 NUP88Q99567 741 aaPredicted RBP18.54■□□□□ 0.56
PMF1-205ENST00000497069 UPF3BQ9BZI7 483 aaKnown RBP18.54■□□□□ 0.56
PMF1-205ENST00000497069 ASCC2Q9H1I8 757 aaPredicted RBP18.54■□□□□ 0.56
PMF1-205ENST00000497069 LY9Q9HBG7 655 aa18.54■□□□□ 0.56
PMF1-205ENST00000497069 SAGE1Q9NXZ1 904 aa18.54■□□□□ 0.56
PMF1-205ENST00000497069 LOC285556D6RIA3 1793 aa18.54■□□□□ 0.56
PMF1-205ENST00000497069 FLOT1O75955 427 aa18.53■□□□□ 0.56
PMF1-205ENST00000497069 CYP2C8P10632 490 aa18.53■□□□□ 0.56
PMF1-205ENST00000497069 RBM25P49756 843 aaKnown RBP18.53■□□□□ 0.56
PMF1-205ENST00000497069 IKQ13123 557 aaPredicted RBP18.53■□□□□ 0.56
PMF1-205ENST00000497069 Q6ZUG5 572 aa18.53■□□□□ 0.56
PMF1-205ENST00000497069 GPHNQ9NQX3 736 aaPredicted RBP18.53■□□□□ 0.56
PMF1-205ENST00000497069 WBP1LQ9NX94 342 aa18.53■□□□□ 0.56
PMF1-205ENST00000497069 PTPRFP10586 1907 aa18.53■□□□□ 0.56
PMF1-205ENST00000497069 COG2Q14746 738 aa18.52■□□□□ 0.56
PMF1-205ENST00000497069 SAMD1Q6SPF0 538 aaPredicted RBP18.52■□□□□ 0.56
PMF1-205ENST00000497069 IL17RAQ96F46 866 aa18.52■□□□□ 0.56
PMF1-205ENST00000497069 PDRG1Q9NUG6 133 aa18.52■□□□□ 0.56
PMF1-205ENST00000497069 HOXC10Q9NYD6 342 aa18.52■□□□□ 0.56
PMF1-205ENST00000497069 FEM1BQ9UK73 627 aa18.52■□□□□ 0.56
PMF1-205ENST00000497069 SLC12A7Q9Y666 1083 aa18.52■□□□□ 0.56
PMF1-205ENST00000497069 MYH4Q9Y623 1939 aa18.52■□□□□ 0.56
PMF1-205ENST00000497069 TMEM232C9JQI7 657 aa18.51■□□□□ 0.55
PMF1-205ENST00000497069 TBC1D8O95759 1140 aa18.51■□□□□ 0.55
PMF1-205ENST00000497069 PDHBP11177 359 aa18.51■□□□□ 0.55
PMF1-205ENST00000497069 CRHR2Q13324 411 aa18.51■□□□□ 0.55
PMF1-205ENST00000497069 KCTD1Q719H9 257 aa18.51■□□□□ 0.55
PMF1-205ENST00000497069 CHURC1Q8WUH1 139 aa18.51■□□□□ 0.55
PMF1-205ENST00000497069 NUP133Q8WUM0 1156 aa18.51■□□□□ 0.55
PMF1-205ENST00000497069 P2RX7Q99572 595 aaKnown RBP18.51■□□□□ 0.55
PMF1-205ENST00000497069 SENP2Q9HC62 589 aa18.51■□□□□ 0.55
PMF1-205ENST00000497069 NAP1L2Q9ULW6 460 aaPredicted RBP18.51■□□□□ 0.55
PMF1-205ENST00000497069 DDAH1O94760 285 aa18.5■□□□□ 0.55
PMF1-205ENST00000497069 PARP1P09874 1014 aaKnown RBP18.5■□□□□ 0.55
PMF1-205ENST00000497069 CALM1P0DP23 149 aa18.5■□□□□ 0.55
PMF1-205ENST00000497069 CALM2P0DP24 149 aa18.5■□□□□ 0.55
PMF1-205ENST00000497069 CALM3P0DP25 149 aa18.5■□□□□ 0.55
PMF1-205ENST00000497069 SNHG28P0DPA3 235 aa18.5■□□□□ 0.55
PMF1-205ENST00000497069 STAT2P52630 851 aa18.5■□□□□ 0.55
PMF1-205ENST00000497069 HERVK_113P62684 666 aa18.5■□□□□ 0.55
PMF1-205ENST00000497069 ZNF543Q08ER8 600 aa18.5■□□□□ 0.55
PMF1-205ENST00000497069 GPATCH4Q5T3I0 446 aaKnown RBP18.5■□□□□ 0.55
PMF1-205ENST00000497069 FAM160B2Q86V87 743 aa18.5■□□□□ 0.55
PMF1-205ENST00000497069 SGMS1Q86VZ5 419 aa18.5■□□□□ 0.55
PMF1-205ENST00000497069 ZNF654Q8IZM8 581 aa18.5■□□□□ 0.55
PMF1-205ENST00000497069 GTF3C2Q8WUA4 911 aaPredicted RBP18.5■□□□□ 0.55
PMF1-205ENST00000497069 BRF1Q92994 677 aa18.5■□□□□ 0.55
PMF1-205ENST00000497069 TBC1D32Q96NH3 1257 aa18.5■□□□□ 0.55
PMF1-205ENST00000497069 SLF1Q9BQI6 1058 aa18.5■□□□□ 0.55
PMF1-205ENST00000497069 GPCPD1Q9NPB8 672 aa18.5■□□□□ 0.55
PMF1-205ENST00000497069 CTDP1Q9Y5B0 961 aaPredicted RBP18.5■□□□□ 0.55
PMF1-205ENST00000497069 FRMPD2Q68DX3 1309 aaPredicted RBP18.49■□□□□ 0.55
PMF1-205ENST00000497069 MYPNQ86TC9 1320 aa18.49■□□□□ 0.55
PMF1-205ENST00000497069 KLF18A0A0U1RQI7 1052 aa18.49■□□□□ 0.55
PMF1-205ENST00000497069 TLR2O60603 784 aa18.49■□□□□ 0.55
PMF1-205ENST00000497069 GCLCP48506 637 aaPredicted RBP18.49■□□□□ 0.55
PMF1-205ENST00000497069 ASPRV1Q53RT3 343 aa18.49■□□□□ 0.55
PMF1-205ENST00000497069 RASGRP2Q7LDG7 609 aa18.49■□□□□ 0.55
PMF1-205ENST00000497069 FBXL16Q8N461 479 aa18.49■□□□□ 0.55
PMF1-205ENST00000497069 PRPF38AQ8NAV1 312 aaKnown RBP18.49■□□□□ 0.55
PMF1-205ENST00000497069 CTCFLQ8NI51 663 aaPredicted RBP18.49■□□□□ 0.55
PMF1-205ENST00000497069 KIFC2Q96AC6 838 aa18.49■□□□□ 0.55
PMF1-205ENST00000497069 CFHR5Q9BXR6 569 aa18.49■□□□□ 0.55
PMF1-205ENST00000497069 FBXO28Q9NVF7 368 aa18.49■□□□□ 0.55
PMF1-205ENST00000497069 ZBTB43O43298 467 aa18.48■□□□□ 0.55
PMF1-205ENST00000497069 DSG3P32926 999 aa18.48■□□□□ 0.55
PMF1-205ENST00000497069 KIF5BP33176 963 aa18.48■□□□□ 0.55
PMF1-205ENST00000497069 NEK4P51957 841 aa18.48■□□□□ 0.55
PMF1-205ENST00000497069 TROAPQ12815 778 aa18.48■□□□□ 0.55
PMF1-205ENST00000497069 ANKRD1Q15327 319 aa18.48■□□□□ 0.55
PMF1-205ENST00000497069 PPP1R9AQ9ULJ8 1098 aa18.48■□□□□ 0.55
PMF1-205ENST00000497069 SPDYE16A6NNV3 312 aaPredicted RBP18.47■□□□□ 0.55
PMF1-205ENST00000497069 PLA2G6O60733 806 aa18.47■□□□□ 0.55
PMF1-205ENST00000497069 ZBED4O75132 1171 aa18.47■□□□□ 0.55
PMF1-205ENST00000497069 GOLGA8HP0CJ92 632 aa18.47■□□□□ 0.55
PMF1-205ENST00000497069 HSPA1AP0DMV8 641 aaKnown RBP18.47■□□□□ 0.55
PMF1-205ENST00000497069 HSPA1BP0DMV9 641 aaKnown RBP18.47■□□□□ 0.55
PMF1-205ENST00000497069 APOBRQ0VD83 1088 aa18.47■□□□□ 0.55
PMF1-205ENST00000497069 APOA5Q6Q788 366 aa18.47■□□□□ 0.55
PMF1-205ENST00000497069 MICU3Q86XE3 530 aa18.47■□□□□ 0.55
PMF1-205ENST00000497069 MB21D1Q8N884 522 aa18.47■□□□□ 0.55
PMF1-205ENST00000497069 ATG4CQ96DT6 458 aa18.47■□□□□ 0.55
PMF1-205ENST00000497069 MAP3K14Q99558 947 aa18.47■□□□□ 0.55
PMF1-205ENST00000497069 PAGR1Q9BTK6 254 aa18.47■□□□□ 0.55
PMF1-205ENST00000497069 MYL10Q9BUA6 226 aa18.47■□□□□ 0.55
PMF1-205ENST00000497069 AGXT2Q9BYV1 514 aa18.47■□□□□ 0.55
PMF1-205ENST00000497069 CPA4Q9UI42 421 aa18.47■□□□□ 0.55
PMF1-205ENST00000497069 GRM4Q14833 912 aa18.46■□□□□ 0.55
PMF1-205ENST00000497069 RABEP1Q15276 862 aa18.46■□□□□ 0.55
PMF1-205ENST00000497069 LBX2Q6XYB7 198 aa18.46■□□□□ 0.55
PMF1-205ENST00000497069 ALDH8A1Q9H2A2 487 aaPredicted RBP18.46■□□□□ 0.55
PMF1-205ENST00000497069 TSKSQ9UJT2 592 aa18.46■□□□□ 0.55
PMF1-205ENST00000497069 BRPF3Q9ULD4 1205 aa18.46■□□□□ 0.55
PMF1-205ENST00000497069 GOLGA8BA8MQT2 603 aa18.45■□□□□ 0.54
PMF1-205ENST00000497069 KLRF2D3W0D1 207 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms