RNA–Protein interactions for RNA: ENST00000496907.1

HMGCL-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 3

Gene HMGCL, Length 858 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-206ENST00000496907 TMTC2Q8N394 836 aa7.18□□□□□ -1.26
HMGCL-206ENST00000496907 STAG1Q8WVM7 1258 aa7.18□□□□□ -1.26
HMGCL-206ENST00000496907 PTPN18Q99952 460 aa7.18□□□□□ -1.26
HMGCL-206ENST00000496907 ELP3Q9H9T3 547 aa7.18□□□□□ -1.26
HMGCL-206ENST00000496907 UPF2Q9HAU5 1272 aaKnown RBP7.18□□□□□ -1.26
HMGCL-206ENST00000496907 ZFYVE28Q9HCC9 887 aa7.18□□□□□ -1.26
HMGCL-206ENST00000496907 ARHGEF10LQ9HCE6 1279 aa7.18□□□□□ -1.26
HMGCL-206ENST00000496907 ANO2Q9NQ90 1003 aa7.18□□□□□ -1.26
HMGCL-206ENST00000496907 TCP11L1Q9NUJ3 509 aa7.18□□□□□ -1.26
HMGCL-206ENST00000496907 CCL15-CCL14A0A0B4J2E2 113 aa7.17□□□□□ -1.26
HMGCL-206ENST00000496907 ERICH2A1L162 156 aa7.17□□□□□ -1.26
HMGCL-206ENST00000496907 TSPY2A6NKD2 308 aa7.17□□□□□ -1.26
HMGCL-206ENST00000496907 USP17L10C9JJH3 530 aa7.17□□□□□ -1.26
HMGCL-206ENST00000496907 MPHOSPH10O00566 681 aaKnown RBP7.17□□□□□ -1.26
HMGCL-206ENST00000496907 PTPRAP18433 802 aa7.17□□□□□ -1.26
HMGCL-206ENST00000496907 PSMA5P28066 241 aa7.17□□□□□ -1.26
HMGCL-206ENST00000496907 GJA5P36382 358 aa7.17□□□□□ -1.26
HMGCL-206ENST00000496907 VGLL4Q14135 290 aa7.17□□□□□ -1.26
HMGCL-206ENST00000496907 NECTIN1Q15223 517 aa7.17□□□□□ -1.26
HMGCL-206ENST00000496907 CCL15Q16663 113 aa7.17□□□□□ -1.26
HMGCL-206ENST00000496907 VPS53Q5VIR6 699 aa7.17□□□□□ -1.26
HMGCL-206ENST00000496907 RCSD1Q6JBY9 416 aa7.17□□□□□ -1.26
HMGCL-206ENST00000496907 CCDC129Q6ZRS4 1044 aa7.17□□□□□ -1.26
HMGCL-206ENST00000496907 RALYLQ86SE5 291 aaKnown RBP7.17□□□□□ -1.26
HMGCL-206ENST00000496907 ZNF280CQ8ND82 737 aa7.17□□□□□ -1.26
HMGCL-206ENST00000496907 NEDD1Q8NHV4 660 aa7.17□□□□□ -1.26
HMGCL-206ENST00000496907 MAFAQ8NHW3 353 aaPredicted RBP7.17□□□□□ -1.26
HMGCL-206ENST00000496907 NCOA7Q8NI08 942 aa7.17□□□□□ -1.26
HMGCL-206ENST00000496907 OPTNQ96CV9 577 aa7.17□□□□□ -1.26
HMGCL-206ENST00000496907 SHISA4Q96DD7 197 aa7.17□□□□□ -1.26
HMGCL-206ENST00000496907 ARHGAP39Q9C0H5 1083 aa7.17□□□□□ -1.26
HMGCL-206ENST00000496907 TMOD4Q9NZQ9 345 aa7.17□□□□□ -1.26
HMGCL-206ENST00000496907 NYAP2Q9P242 653 aa7.17□□□□□ -1.26
HMGCL-206ENST00000496907 SLC45A1Q9Y2W3 748 aa7.17□□□□□ -1.26
HMGCL-206ENST00000496907 ZHX2Q9Y6X8 837 aa7.17□□□□□ -1.26
HMGCL-206ENST00000496907 ROBO3Q96MS0 1386 aa7.17□□□□□ -1.26
HMGCL-206ENST00000496907 MYH13Q9UKX3 1938 aa7.17□□□□□ -1.26
HMGCL-206ENST00000496907 MAST2Q6P0Q8 1798 aa7.16□□□□□ -1.26
HMGCL-206ENST00000496907 TESPA1A2RU30 521 aaPredicted RBP7.16□□□□□ -1.26
HMGCL-206ENST00000496907 RANBP6O60518 1105 aaKnown RBP7.16□□□□□ -1.26
HMGCL-206ENST00000496907 TTLL1O95922 423 aa7.16□□□□□ -1.26
HMGCL-206ENST00000496907 CHGBP05060 677 aa7.16□□□□□ -1.26
HMGCL-206ENST00000496907 INPP5BP32019 993 aa7.16□□□□□ -1.26
HMGCL-206ENST00000496907 SHMT1P34896 483 aa7.16□□□□□ -1.26
HMGCL-206ENST00000496907 BACE1P56817 501 aa7.16□□□□□ -1.26
HMGCL-206ENST00000496907 ANAPC15P60006 121 aa7.16□□□□□ -1.26
HMGCL-206ENST00000496907 TFAP4Q01664 338 aa7.16□□□□□ -1.26
HMGCL-206ENST00000496907 MTFR1Q15390 333 aa7.16□□□□□ -1.26
HMGCL-206ENST00000496907 SH3D19Q5HYK7 790 aa7.16□□□□□ -1.26
HMGCL-206ENST00000496907 USP17L2Q6R6M4 530 aa7.16□□□□□ -1.26
HMGCL-206ENST00000496907 DGKHQ86XP1 1220 aa7.16□□□□□ -1.26
HMGCL-206ENST00000496907 SPRYD3Q8NCJ5 442 aa7.16□□□□□ -1.26
HMGCL-206ENST00000496907 PROCA1Q8NCQ7 364 aaPredicted RBP7.16□□□□□ -1.26
HMGCL-206ENST00000496907 NKX2-3Q8TAU0 364 aa7.16□□□□□ -1.26
HMGCL-206ENST00000496907 GTF3C2Q8WUA4 911 aaPredicted RBP7.16□□□□□ -1.26
HMGCL-206ENST00000496907 BRI3BPQ8WY22 251 aa7.16□□□□□ -1.26
HMGCL-206ENST00000496907 LPAR1Q92633 364 aa7.16□□□□□ -1.26
HMGCL-206ENST00000496907 ZKSCAN4Q969J2 545 aaPredicted RBP7.16□□□□□ -1.26
HMGCL-206ENST00000496907 MKL1Q969V6 931 aa7.16□□□□□ -1.26
HMGCL-206ENST00000496907 LSG1Q9H089 658 aaKnown RBP7.16□□□□□ -1.26
HMGCL-206ENST00000496907 KIAA1683Q9H0B3 1180 aa7.16□□□□□ -1.26
HMGCL-206ENST00000496907 EPB41L4AQ9HCS5 686 aaPredicted RBP7.16□□□□□ -1.26
HMGCL-206ENST00000496907 GOPCQ9HD26 462 aa7.16□□□□□ -1.26
HMGCL-206ENST00000496907 TOMM22Q9NS69 142 aa7.16□□□□□ -1.26
HMGCL-206ENST00000496907 BIN2Q9UBW5 565 aaPredicted RBP7.16□□□□□ -1.26
HMGCL-206ENST00000496907 ZBTB21Q9ULJ3 1066 aa7.16□□□□□ -1.26
HMGCL-206ENST00000496907 KCNH4Q9UQ05 1017 aa7.16□□□□□ -1.26
HMGCL-206ENST00000496907 AFG3L2Q9Y4W6 797 aa7.16□□□□□ -1.26
HMGCL-206ENST00000496907 RBM8AQ9Y5S9 174 aaKnown RBP7.16□□□□□ -1.26
HMGCL-206ENST00000496907 MYH2Q9UKX2 1941 aa7.16□□□□□ -1.26
HMGCL-206ENST00000496907 DOCK2Q92608 1830 aa7.15□□□□□ -1.26
HMGCL-206ENST00000496907 FOXP2O15409 715 aa7.15□□□□□ -1.26
HMGCL-206ENST00000496907 EVI5O60447 810 aa7.15□□□□□ -1.26
HMGCL-206ENST00000496907 GH2P01242 217 aa7.15□□□□□ -1.26
HMGCL-206ENST00000496907 FDX1P10109 184 aa7.15□□□□□ -1.26
HMGCL-206ENST00000496907 RASA1P20936 1047 aa7.15□□□□□ -1.26
HMGCL-206ENST00000496907 LACTBP83111 547 aaPredicted RBP7.15□□□□□ -1.26
HMGCL-206ENST00000496907 SPP2Q13103 211 aa7.15□□□□□ -1.26
HMGCL-206ENST00000496907 RAB3GAP1Q15042 981 aa7.15□□□□□ -1.26
HMGCL-206ENST00000496907 CREB3L3Q68CJ9 461 aa7.15□□□□□ -1.26
HMGCL-206ENST00000496907 FAM43AQ8N2R8 423 aa7.15□□□□□ -1.26
HMGCL-206ENST00000496907 CHMP4CQ96CF2 233 aa7.15□□□□□ -1.26
HMGCL-206ENST00000496907 DYNLL2Q96FJ2 89 aa7.15□□□□□ -1.26
HMGCL-206ENST00000496907 TMEM87BQ96K49 555 aa7.15□□□□□ -1.26
HMGCL-206ENST00000496907 UBAC1Q9BSL1 405 aa7.15□□□□□ -1.26
HMGCL-206ENST00000496907 HOXC10Q9NYD6 342 aa7.15□□□□□ -1.26
HMGCL-206ENST00000496907 PNMA3Q9UL41 463 aa7.15□□□□□ -1.26
HMGCL-206ENST00000496907 PNMA2Q9UL42 364 aa7.15□□□□□ -1.26
HMGCL-206ENST00000496907 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.15□□□□□ -1.26
HMGCL-206ENST00000496907 TMX2Q9Y320 296 aa7.15□□□□□ -1.26
HMGCL-206ENST00000496907 HCN4Q9Y3Q4 1203 aa7.15□□□□□ -1.26
HMGCL-206ENST00000496907 SNCAIPQ9Y6H5 919 aa7.15□□□□□ -1.26
HMGCL-206ENST00000496907 NCOR1O75376 2440 aa7.15□□□□□ -1.27
HMGCL-206ENST00000496907 A0A0G2JLL6 359 aaPredicted RBP7.14□□□□□ -1.27
HMGCL-206ENST00000496907 E7EWF7 191 aa7.14□□□□□ -1.27
HMGCL-206ENST00000496907 IRF6O14896 467 aa7.14□□□□□ -1.27
HMGCL-206ENST00000496907 FARP2O94887 1054 aaPredicted RBP7.14□□□□□ -1.27
HMGCL-206ENST00000496907 GNRH1P01148 92 aa7.14□□□□□ -1.27
HMGCL-206ENST00000496907 CYP21A2P08686 494 aa7.14□□□□□ -1.27
HMGCL-206ENST00000496907 CYP2D6P10635 497 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms