RNA–Protein interactions for RNA: ENST00000496822.1

NEK4-206, Transcript of NIMA related kinase 4, humanhuman

TSL 3

Gene NEK4, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-206ENST00000496822 LHX8Q68G74 356 aa18■□□□□ 0.47
NEK4-206ENST00000496822 NCAPG2Q86XI2 1143 aa18■□□□□ 0.47
NEK4-206ENST00000496822 LNPKQ9C0E8 428 aa18■□□□□ 0.47
NEK4-206ENST00000496822 NAPBQ9H115 298 aa18■□□□□ 0.47
NEK4-206ENST00000496822 NYAP2Q9P242 653 aa18■□□□□ 0.47
NEK4-206ENST00000496822 ADAMTS5Q9UNA0 930 aa18■□□□□ 0.47
NEK4-206ENST00000496822 COBLO75128 1261 aa17.99■□□□□ 0.47
NEK4-206ENST00000496822 NDUFB10O96000 172 aa17.99■□□□□ 0.47
NEK4-206ENST00000496822 IGHA2P01877 340 aa17.99■□□□□ 0.47
NEK4-206ENST00000496822 PPARAQ07869 468 aa17.99■□□□□ 0.47
NEK4-206ENST00000496822 VPS53Q5VIR6 699 aa17.99■□□□□ 0.47
NEK4-206ENST00000496822 MFSD14CQ5VZR4 134 aa17.99■□□□□ 0.47
NEK4-206ENST00000496822 TRPV1Q8NER1 839 aa17.99■□□□□ 0.47
NEK4-206ENST00000496822 REPS2Q8NFH8 660 aa17.99■□□□□ 0.47
NEK4-206ENST00000496822 CEP95Q96GE4 821 aa17.99■□□□□ 0.47
NEK4-206ENST00000496822 NACAP1Q9BZK3 213 aa17.99■□□□□ 0.47
NEK4-206ENST00000496822 NBPF3Q9H094 633 aa17.99■□□□□ 0.47
NEK4-206ENST00000496822 CLIP2Q9UDT6 1046 aa17.99■□□□□ 0.47
NEK4-206ENST00000496822 PPP1R9AQ9ULJ8 1098 aa17.99■□□□□ 0.47
NEK4-206ENST00000496822 PFASO15067 1338 aa17.98■□□□□ 0.47
NEK4-206ENST00000496822 COL11A1P12107 1806 aaPredicted RBP17.98■□□□□ 0.47
NEK4-206ENST00000496822 F5H6K3 240 aa17.98■□□□□ 0.47
NEK4-206ENST00000496822 VWA5AO00534 786 aa17.98■□□□□ 0.47
NEK4-206ENST00000496822 EVI5O60447 810 aa17.98■□□□□ 0.47
NEK4-206ENST00000496822 KLRC3Q07444 240 aa17.98■□□□□ 0.47
NEK4-206ENST00000496822 DPP9Q86TI2 863 aa17.98■□□□□ 0.47
NEK4-206ENST00000496822 ZNF444Q8N0Y2 327 aaPredicted RBP17.98■□□□□ 0.47
NEK4-206ENST00000496822 LRRC47Q8N1G4 583 aaKnown RBP17.98■□□□□ 0.47
NEK4-206ENST00000496822 EXOC6Q8TAG9 804 aa17.98■□□□□ 0.47
NEK4-206ENST00000496822 EVI5LQ96CN4 794 aa17.98■□□□□ 0.47
NEK4-206ENST00000496822 MROH8Q9H579 483 aa17.98■□□□□ 0.47
NEK4-206ENST00000496822 C11orf49Q9H6J7 331 aa17.98■□□□□ 0.47
NEK4-206ENST00000496822 ZNF214Q9UL59 606 aaPredicted RBP17.98■□□□□ 0.47
NEK4-206ENST00000496822 NR2E3Q9Y5X4 410 aa17.98■□□□□ 0.47
NEK4-206ENST00000496822 PLIN4Q96Q06 1357 aa17.98■□□□□ 0.47
NEK4-206ENST00000496822 FRMPD3Q5JV73 1810 aa17.98■□□□□ 0.47
NEK4-206ENST00000496822 STRNO43815 780 aa17.97■□□□□ 0.47
NEK4-206ENST00000496822 IGHDP01880 384 aa17.97■□□□□ 0.47
NEK4-206ENST00000496822 FAM47AQ5JRC9 791 aa17.97■□□□□ 0.47
NEK4-206ENST00000496822 SMC5Q8IY18 1101 aa17.97■□□□□ 0.47
NEK4-206ENST00000496822 FAM227BQ96M60 508 aa17.97■□□□□ 0.47
NEK4-206ENST00000496822 ZNF287Q9HBT7 754 aa17.97■□□□□ 0.47
NEK4-206ENST00000496822 MTMR4Q9NYA4 1195 aa17.97■□□□□ 0.47
NEK4-206ENST00000496822 TACC3Q9Y6A5 838 aa17.97■□□□□ 0.47
NEK4-206ENST00000496822 A0A0D9SFI3 127 aa17.96■□□□□ 0.47
NEK4-206ENST00000496822 CYBAP13498 195 aa17.96■□□□□ 0.47
NEK4-206ENST00000496822 FXR1P51114 621 aaKnown RBP eCLIP17.96■□□□□ 0.47
NEK4-206ENST00000496822 AAMPQ13685 434 aa17.96■□□□□ 0.47
NEK4-206ENST00000496822 OLFML2BQ68BL8 750 aa17.96■□□□□ 0.47
NEK4-206ENST00000496822 B4GALNT3Q6L9W6 998 aa17.96■□□□□ 0.47
NEK4-206ENST00000496822 RIOX2Q8IUF8 465 aa17.96■□□□□ 0.47
NEK4-206ENST00000496822 ABRAQ8N0Z2 381 aa17.96■□□□□ 0.47
NEK4-206ENST00000496822 NEDD1Q8NHV4 660 aa17.96■□□□□ 0.47
NEK4-206ENST00000496822 SLF1Q9BQI6 1058 aa17.96■□□□□ 0.47
NEK4-206ENST00000496822 INCENPQ9NQS7 918 aa17.96■□□□□ 0.47
NEK4-206ENST00000496822 RBM27Q9P2N5 1060 aaKnown RBP17.96■□□□□ 0.47
NEK4-206ENST00000496822 DDX20Q9UHI6 824 aaKnown RBP17.96■□□□□ 0.47
NEK4-206ENST00000496822 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.96■□□□□ 0.47
NEK4-206ENST00000496822 SLC25A27O95847 323 aa17.95■□□□□ 0.46
NEK4-206ENST00000496822 CENPBP07199 599 aaPredicted RBP17.95■□□□□ 0.46
NEK4-206ENST00000496822 TSPY3P0CV98 308 aa17.95■□□□□ 0.46
NEK4-206ENST00000496822 TSPY8P0CW00 308 aa17.95■□□□□ 0.46
NEK4-206ENST00000496822 COL6A1P12109 1028 aa17.95■□□□□ 0.46
NEK4-206ENST00000496822 CNGA1P29973 690 aa17.95■□□□□ 0.46
NEK4-206ENST00000496822 CTDSPL2Q05D32 466 aa17.95■□□□□ 0.46
NEK4-206ENST00000496822 PDE4BQ07343 736 aa17.95■□□□□ 0.46
NEK4-206ENST00000496822 C7orf61Q8IZ16 206 aa17.95■□□□□ 0.46
NEK4-206ENST00000496822 PRO3102Q9H379 93 aa17.95■□□□□ 0.46
NEK4-206ENST00000496822 RANBP2P49792 3224 aaKnown RBP17.95■□□□□ 0.46
NEK4-206ENST00000496822 MYH4Q9Y623 1939 aa17.94■□□□□ 0.46
NEK4-206ENST00000496822 TTLL1O95922 423 aa17.94■□□□□ 0.46
NEK4-206ENST00000496822 FCER1AP12319 257 aa17.94■□□□□ 0.46
NEK4-206ENST00000496822 STAT3P40763 770 aa17.94■□□□□ 0.46
NEK4-206ENST00000496822 TFAP4Q01664 338 aa17.94■□□□□ 0.46
NEK4-206ENST00000496822 MKL1Q969V6 931 aa17.94■□□□□ 0.46
NEK4-206ENST00000496822 MAML3Q96JK9 1138 aa17.94■□□□□ 0.46
NEK4-206ENST00000496822 MMP19Q99542 508 aa17.94■□□□□ 0.46
NEK4-206ENST00000496822 RWDD1Q9H446 243 aaPredicted RBP17.94■□□□□ 0.46
NEK4-206ENST00000496822 HELLSQ9NRZ9 838 aa17.94■□□□□ 0.46
NEK4-206ENST00000496822 PCDH10Q9P2E7 1040 aa17.94■□□□□ 0.46
NEK4-206ENST00000496822 TRIOBPQ9H2D6 2365 aa17.93■□□□□ 0.46
NEK4-206ENST00000496822 PGK2P07205 417 aa17.93■□□□□ 0.46
NEK4-206ENST00000496822 SLC3A2P08195 630 aaKnown RBP17.93■□□□□ 0.46
NEK4-206ENST00000496822 NMIQ13287 307 aaPredicted RBP17.93■□□□□ 0.46
NEK4-206ENST00000496822 ZNF589Q86UQ0 364 aaPredicted RBP17.93■□□□□ 0.46
NEK4-206ENST00000496822 CHD1LQ86WJ1 897 aa17.93■□□□□ 0.46
NEK4-206ENST00000496822 GMCL1P1Q8NEA9 526 aa17.93■□□□□ 0.46
NEK4-206ENST00000496822 ZMYND8Q9ULU4 1186 aaPredicted RBP17.93■□□□□ 0.46
NEK4-206ENST00000496822 NMT2O60551 498 aa17.92■□□□□ 0.46
NEK4-206ENST00000496822 PRAMEF19Q5SWL8 479 aa17.92■□□□□ 0.46
NEK4-206ENST00000496822 ANO1Q5XXA6 986 aa17.92■□□□□ 0.46
NEK4-206ENST00000496822 SNRNP48Q6IEG0 339 aaKnown RBP17.92■□□□□ 0.46
NEK4-206ENST00000496822 RASGRP2Q7LDG7 609 aa17.92■□□□□ 0.46
NEK4-206ENST00000496822 PLEKHM2Q8IWE5 1019 aa17.92■□□□□ 0.46
NEK4-206ENST00000496822 KIFC2Q96AC6 838 aa17.92■□□□□ 0.46
NEK4-206ENST00000496822 CHMP4CQ96CF2 233 aa17.92■□□□□ 0.46
NEK4-206ENST00000496822 TEX13BQ9BXU2 312 aa17.92■□□□□ 0.46
NEK4-206ENST00000496822 SYNPO2Q9UMS6 1093 aa17.92■□□□□ 0.46
NEK4-206ENST00000496822 RIPK3Q9Y572 518 aa17.92■□□□□ 0.46
NEK4-206ENST00000496822 TRIM6-TRIM34B2RNG4 842 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms