RNA–Protein interactions for RNA: ENST00000496335.1

PDAP1-204, Transcript of PDGFA associated protein 1, humanhuman

TSL 3

Gene PDAP1, Length 302 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-204ENST00000496335 TTLL1O95922 423 aa17.18■□□□□ 0.34
PDAP1-204ENST00000496335 HAND2P61296 217 aa17.18■□□□□ 0.34
PDAP1-204ENST00000496335 PLS1Q14651 629 aa17.18■□□□□ 0.34
PDAP1-204ENST00000496335 LRRC47Q8N1G4 583 aaKnown RBP17.18■□□□□ 0.34
PDAP1-204ENST00000496335 SOCS4Q8WXH5 440 aa17.18■□□□□ 0.34
PDAP1-204ENST00000496335 TRIB2Q92519 343 aa17.18■□□□□ 0.34
PDAP1-204ENST00000496335 MKL1Q969V6 931 aa17.18■□□□□ 0.34
PDAP1-204ENST00000496335 SHISA4Q96DD7 197 aa17.18■□□□□ 0.34
PDAP1-204ENST00000496335 SPATC1LQ9H0A9 340 aa17.18■□□□□ 0.34
PDAP1-204ENST00000496335 TSPY2A6NKD2 308 aa17.17■□□□□ 0.34
PDAP1-204ENST00000496335 HIP1O00291 1037 aa17.17■□□□□ 0.34
PDAP1-204ENST00000496335 RANBP6O60518 1105 aaKnown RBP17.17■□□□□ 0.34
PDAP1-204ENST00000496335 HMGCRP04035 888 aa17.17■□□□□ 0.34
PDAP1-204ENST00000496335 GJB1P08034 283 aa17.17■□□□□ 0.34
PDAP1-204ENST00000496335 MFAP1P55081 439 aaKnown RBP17.17■□□□□ 0.34
PDAP1-204ENST00000496335 CCL14Q16627 93 aa17.17■□□□□ 0.34
PDAP1-204ENST00000496335 MB21D1Q8N884 522 aa17.17■□□□□ 0.34
PDAP1-204ENST00000496335 CHMP4CQ96CF2 233 aa17.17■□□□□ 0.34
PDAP1-204ENST00000496335 IL17RBQ9NRM6 502 aa17.17■□□□□ 0.34
PDAP1-204ENST00000496335 TOMM22Q9NS69 142 aa17.17■□□□□ 0.34
PDAP1-204ENST00000496335 PPP1R9AQ9ULJ8 1098 aa17.17■□□□□ 0.34
PDAP1-204ENST00000496335 ADAMTS5Q9UNA0 930 aa17.17■□□□□ 0.34
PDAP1-204ENST00000496335 ZMYM6O95789 1325 aa17.17■□□□□ 0.34
PDAP1-204ENST00000496335 ZNFX1Q9P2E3 1918 aaKnown RBP17.16■□□□□ 0.34
PDAP1-204ENST00000496335 SLC15A5A6NIM6 579 aa17.16■□□□□ 0.34
PDAP1-204ENST00000496335 ORC4O43929 436 aa17.16■□□□□ 0.34
PDAP1-204ENST00000496335 FGRP09769 529 aa17.16■□□□□ 0.34
PDAP1-204ENST00000496335 XRCC5P13010 732 aaKnown RBP17.16■□□□□ 0.34
PDAP1-204ENST00000496335 ERCC3P19447 782 aa17.16■□□□□ 0.34
PDAP1-204ENST00000496335 PTPREP23469 700 aa17.16■□□□□ 0.34
PDAP1-204ENST00000496335 RGS2P41220 211 aa17.16■□□□□ 0.34
PDAP1-204ENST00000496335 GJA8P48165 433 aa17.16■□□□□ 0.34
PDAP1-204ENST00000496335 MAP2K5Q13163 448 aa17.16■□□□□ 0.34
PDAP1-204ENST00000496335 TMEM132BQ14DG7 1078 aa17.16■□□□□ 0.34
PDAP1-204ENST00000496335 RRP12Q5JTH9 1297 aaKnown RBP17.16■□□□□ 0.34
PDAP1-204ENST00000496335 NBPF3Q9H094 633 aa17.16■□□□□ 0.34
PDAP1-204ENST00000496335 IL25Q9H293 177 aa17.16■□□□□ 0.34
PDAP1-204ENST00000496335 IVNS1ABPQ9Y6Y0 642 aa17.16■□□□□ 0.34
PDAP1-204ENST00000496335 VWA5AO00534 786 aa17.15■□□□□ 0.34
PDAP1-204ENST00000496335 U2AF1L4Q8WU68 220 aaKnown RBP17.15■□□□□ 0.34
PDAP1-204ENST00000496335 APBA2Q99767 749 aa17.15■□□□□ 0.34
PDAP1-204ENST00000496335 STX8Q9UNK0 236 aa17.15■□□□□ 0.34
PDAP1-204ENST00000496335 SGPL1O95470 568 aa17.14■□□□□ 0.33
PDAP1-204ENST00000496335 ZKSCAN1P17029 563 aaPredicted RBP17.14■□□□□ 0.33
PDAP1-204ENST00000496335 GRB14Q14449 540 aa17.14■□□□□ 0.33
PDAP1-204ENST00000496335 SLFN13Q68D06 897 aa17.14■□□□□ 0.33
PDAP1-204ENST00000496335 NCAPG2Q86XI2 1143 aa17.14■□□□□ 0.33
PDAP1-204ENST00000496335 TBC1D10CQ8IV04 446 aa17.14■□□□□ 0.33
PDAP1-204ENST00000496335 GMCL1P1Q8NEA9 526 aa17.14■□□□□ 0.33
PDAP1-204ENST00000496335 SHCBP1Q8NEM2 672 aa17.14■□□□□ 0.33
PDAP1-204ENST00000496335 REPS2Q8NFH8 660 aa17.14■□□□□ 0.33
PDAP1-204ENST00000496335 NKX2-3Q8TAU0 364 aa17.14■□□□□ 0.33
PDAP1-204ENST00000496335 DEFB118Q96PH6 123 aa17.14■□□□□ 0.33
PDAP1-204ENST00000496335 SLF1Q9BQI6 1058 aa17.14■□□□□ 0.33
PDAP1-204ENST00000496335 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.14■□□□□ 0.331e-8■■■□□ 19.2
PDAP1-204ENST00000496335 PAK6Q9NQU5 681 aaPredicted RBP17.14■□□□□ 0.33
PDAP1-204ENST00000496335 FLRT1Q9NZU1 646 aa17.14■□□□□ 0.33
PDAP1-204ENST00000496335 SYNPO2Q9UMS6 1093 aa17.14■□□□□ 0.33
PDAP1-204ENST00000496335 PRKAR2AP13861 404 aaKnown RBP17.13■□□□□ 0.33
PDAP1-204ENST00000496335 AKNAD1Q5T1N1 836 aa17.13■□□□□ 0.33
PDAP1-204ENST00000496335 MFSD6Q6ZSS7 791 aa17.13■□□□□ 0.33
PDAP1-204ENST00000496335 NPLOC4Q8TAT6 608 aa17.13■□□□□ 0.33
PDAP1-204ENST00000496335 RPTORQ8N122 1335 aa17.13■□□□□ 0.33
PDAP1-204ENST00000496335 LAMA4Q16363 1823 aa17.12■□□□□ 0.33
PDAP1-204ENST00000496335 ZNF213O14771 459 aa17.12■□□□□ 0.33
PDAP1-204ENST00000496335 STRNO43815 780 aa17.12■□□□□ 0.33
PDAP1-204ENST00000496335 TFRCP02786 760 aaKnown RBP17.12■□□□□ 0.33
PDAP1-204ENST00000496335 BMP3P12645 472 aa17.12■□□□□ 0.33
PDAP1-204ENST00000496335 MCCP23508 829 aa17.12■□□□□ 0.33
PDAP1-204ENST00000496335 ADORA2AP29274 412 aa17.12■□□□□ 0.33
PDAP1-204ENST00000496335 STAT3P40763 770 aa17.12■□□□□ 0.33
PDAP1-204ENST00000496335 CACNB2Q08289 660 aaPredicted RBP17.12■□□□□ 0.33
PDAP1-204ENST00000496335 MAP3K21Q5TCX8 1036 aa17.12■□□□□ 0.33
PDAP1-204ENST00000496335 TRMT44Q8IYL2 757 aaKnown RBP17.12■□□□□ 0.33
PDAP1-204ENST00000496335 PRPF38AQ8NAV1 312 aaKnown RBP17.12■□□□□ 0.33
PDAP1-204ENST00000496335 STAG1Q8WVM7 1258 aa17.12■□□□□ 0.33
PDAP1-204ENST00000496335 KIFC2Q96AC6 838 aa17.12■□□□□ 0.33
PDAP1-204ENST00000496335 DSCC1Q9BVC3 393 aa17.12■□□□□ 0.33
PDAP1-204ENST00000496335 MROH8Q9H579 483 aa17.12■□□□□ 0.33
PDAP1-204ENST00000496335 HMX1Q9NP08 348 aaPredicted RBP17.12■□□□□ 0.33
PDAP1-204ENST00000496335 ZNF214Q9UL59 606 aaPredicted RBP17.12■□□□□ 0.33
PDAP1-204ENST00000496335 ISY1Q9ULR0 285 aaKnown RBP17.12■□□□□ 0.33
PDAP1-204ENST00000496335 MTMR7Q9Y216 660 aa17.12■□□□□ 0.33
PDAP1-204ENST00000496335 COBLO75128 1261 aa17.11■□□□□ 0.33
PDAP1-204ENST00000496335 SLC25A27O95847 323 aa17.11■□□□□ 0.33
PDAP1-204ENST00000496335 HOXC6P09630 235 aa17.11■□□□□ 0.33
PDAP1-204ENST00000496335 CHMLP26374 656 aa17.11■□□□□ 0.33
PDAP1-204ENST00000496335 PPP4R3BQ5MIZ7 849 aa17.11■□□□□ 0.33
PDAP1-204ENST00000496335 RASGRP2Q7LDG7 609 aa17.11■□□□□ 0.33
PDAP1-204ENST00000496335 DPP9Q86TI2 863 aa17.11■□□□□ 0.33
PDAP1-204ENST00000496335 SKAP1Q86WV1 359 aa17.11■□□□□ 0.33
PDAP1-204ENST00000496335 RIOX2Q8IUF8 465 aa17.11■□□□□ 0.33
PDAP1-204ENST00000496335 FEM1BQ9UK73 627 aa17.11■□□□□ 0.33
PDAP1-204ENST00000496335 NEDD4P46934 1319 aa17.11■□□□□ 0.33
PDAP1-204ENST00000496335 CEP290O15078 2479 aa17.11■□□□□ 0.33
PDAP1-204ENST00000496335 ZNF236Q9UL36 1845 aa17.1■□□□□ 0.33
PDAP1-204ENST00000496335 TMEM232C9JQI7 657 aa17.1■□□□□ 0.33
PDAP1-204ENST00000496335 SLC1A4P43007 532 aa17.1■□□□□ 0.33
PDAP1-204ENST00000496335 NOVP48745 357 aa17.1■□□□□ 0.33
PDAP1-204ENST00000496335 SLC4A3P48751 1232 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms