RNA–Protein interactions for RNA: ENST00000495988.1

APOBEC3A-204, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3A, humanhuman

TSL 4

Gene APOBEC3A, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3A-204ENST00000495988 PATL2C9JE40 543 aaKnown RBP20.24■□□□□ 0.83
APOBEC3A-204ENST00000495988 FAM83BQ5T0W9 1011 aa20.24■□□□□ 0.83
APOBEC3A-204ENST00000495988 ANKRD45Q5TZF3 282 aa20.24■□□□□ 0.83
APOBEC3A-204ENST00000495988 YTHDC1Q96MU7 727 aaKnown RBP20.24■□□□□ 0.83
APOBEC3A-204ENST00000495988 NACAP1Q9BZK3 213 aa20.24■□□□□ 0.83
APOBEC3A-204ENST00000495988 ZNF287Q9HBT7 754 aa20.24■□□□□ 0.83
APOBEC3A-204ENST00000495988 COL11A1P12107 1806 aaPredicted RBP20.24■□□□□ 0.83
APOBEC3A-204ENST00000495988 FRMPD3Q5JV73 1810 aa20.24■□□□□ 0.83
APOBEC3A-204ENST00000495988 TMEM132BQ14DG7 1078 aa20.23■□□□□ 0.83
APOBEC3A-204ENST00000495988 ZMYM1Q5SVZ6 1142 aa20.23■□□□□ 0.83
APOBEC3A-204ENST00000495988 OLFML2BQ68BL8 750 aa20.23■□□□□ 0.83
APOBEC3A-204ENST00000495988 ZNF444Q8N0Y2 327 aaPredicted RBP20.23■□□□□ 0.83
APOBEC3A-204ENST00000495988 PRO3102Q9H379 93 aa20.23■□□□□ 0.83
APOBEC3A-204ENST00000495988 SLC5A4Q9NY91 659 aa20.23■□□□□ 0.83
APOBEC3A-204ENST00000495988 NYAP2Q9P242 653 aa20.23■□□□□ 0.83
APOBEC3A-204ENST00000495988 DDX20Q9UHI6 824 aaKnown RBP20.23■□□□□ 0.83
APOBEC3A-204ENST00000495988 PPP1R9AQ9ULJ8 1098 aa20.23■□□□□ 0.83
APOBEC3A-204ENST00000495988 ADAMTS5Q9UNA0 930 aa20.23■□□□□ 0.83
APOBEC3A-204ENST00000495988 TRIOBPQ9H2D6 2365 aa20.23■□□□□ 0.83
APOBEC3A-204ENST00000495988 PFASO15067 1338 aa20.23■□□□□ 0.83
APOBEC3A-204ENST00000495988 MSCO60682 206 aa20.22■□□□□ 0.83
APOBEC3A-204ENST00000495988 COBLO75128 1261 aa20.22■□□□□ 0.83
APOBEC3A-204ENST00000495988 PRDM1O75626 825 aa20.22■□□□□ 0.83
APOBEC3A-204ENST00000495988 SLC25A27O95847 323 aa20.22■□□□□ 0.83
APOBEC3A-204ENST00000495988 ABRAQ8N0Z2 381 aa20.22■□□□□ 0.83
APOBEC3A-204ENST00000495988 SALL3Q9BXA9 1300 aa20.22■□□□□ 0.83
APOBEC3A-204ENST00000495988 F5H6K3 240 aa20.21■□□□□ 0.83
APOBEC3A-204ENST00000495988 VWA5AO00534 786 aa20.21■□□□□ 0.83
APOBEC3A-204ENST00000495988 IGHA2P01877 340 aa20.21■□□□□ 0.83
APOBEC3A-204ENST00000495988 COL6A1P12109 1028 aa20.21■□□□□ 0.83
APOBEC3A-204ENST00000495988 FCER1AP12319 257 aa20.21■□□□□ 0.83
APOBEC3A-204ENST00000495988 CYBAP13498 195 aa20.21■□□□□ 0.83
APOBEC3A-204ENST00000495988 KLRC3Q07444 240 aa20.21■□□□□ 0.83
APOBEC3A-204ENST00000495988 NUP88Q99567 741 aaPredicted RBP20.21■□□□□ 0.83
APOBEC3A-204ENST00000495988 NAPBQ9H115 298 aa20.21■□□□□ 0.83
APOBEC3A-204ENST00000495988 CLIP2Q9UDT6 1046 aa20.21■□□□□ 0.83
APOBEC3A-204ENST00000495988 ZMYND8Q9ULU4 1186 aaPredicted RBP20.21■□□□□ 0.83
APOBEC3A-204ENST00000495988 MYH4Q9Y623 1939 aa20.2■□□□□ 0.82
APOBEC3A-204ENST00000495988 IGKV6D-41A0A0C4DH26 115 aa20.2■□□□□ 0.82
APOBEC3A-204ENST00000495988 STAT3P40763 770 aa20.2■□□□□ 0.82
APOBEC3A-204ENST00000495988 RIOX2Q8IUF8 465 aa20.2■□□□□ 0.82
APOBEC3A-204ENST00000495988 TRPV1Q8NER1 839 aa20.2■□□□□ 0.82
APOBEC3A-204ENST00000495988 STAP2Q9UGK3 403 aa20.2■□□□□ 0.82
APOBEC3A-204ENST00000495988 NDUFB10O96000 172 aa20.19■□□□□ 0.82
APOBEC3A-204ENST00000495988 SLC3A2P08195 630 aaKnown RBP20.19■□□□□ 0.82
APOBEC3A-204ENST00000495988 PDE4BQ07343 736 aa20.19■□□□□ 0.82
APOBEC3A-204ENST00000495988 PPARAQ07869 468 aa20.19■□□□□ 0.82
APOBEC3A-204ENST00000495988 HDAC1Q13547 482 aaPredicted RBP20.19■□□□□ 0.82
APOBEC3A-204ENST00000495988 CEP95Q96GE4 821 aa20.19■□□□□ 0.82
APOBEC3A-204ENST00000495988 MMP19Q99542 508 aa20.19■□□□□ 0.82
APOBEC3A-204ENST00000495988 SLF1Q9BQI6 1058 aa20.19■□□□□ 0.82
APOBEC3A-204ENST00000495988 ZNFX1Q9P2E3 1918 aaKnown RBP20.19■□□□□ 0.82
APOBEC3A-204ENST00000495988 TSPY3P0CV98 308 aa20.18■□□□□ 0.82
APOBEC3A-204ENST00000495988 TSPY8P0CW00 308 aa20.18■□□□□ 0.82
APOBEC3A-204ENST00000495988 SYN1P17600 705 aa20.18■□□□□ 0.82
APOBEC3A-204ENST00000495988 KCTD2Q14681 263 aa20.18■□□□□ 0.82
APOBEC3A-204ENST00000495988 REPS2Q8NFH8 660 aa20.18■□□□□ 0.82
APOBEC3A-204ENST00000495988 MAML3Q96JK9 1138 aa20.18■□□□□ 0.82
APOBEC3A-204ENST00000495988 MTMR4Q9NYA4 1195 aa20.18■□□□□ 0.82
APOBEC3A-204ENST00000495988 ZNF214Q9UL59 606 aaPredicted RBP20.18■□□□□ 0.82
APOBEC3A-204ENST00000495988 A0A1W2PPC1 479 aa20.17■□□□□ 0.82
APOBEC3A-204ENST00000495988 COPB2P35606 906 aa20.17■□□□□ 0.82
APOBEC3A-204ENST00000495988 LRRC26Q2I0M4 334 aa20.17■□□□□ 0.82
APOBEC3A-204ENST00000495988 CCDC129Q6ZRS4 1044 aa20.17■□□□□ 0.82
APOBEC3A-204ENST00000495988 MKL1Q969V6 931 aa20.17■□□□□ 0.82
APOBEC3A-204ENST00000495988 EVI5LQ96CN4 794 aa20.17■□□□□ 0.82
APOBEC3A-204ENST00000495988 SENP6Q9GZR1 1112 aaPredicted RBP20.17■□□□□ 0.82
APOBEC3A-204ENST00000495988 TTLL1O95922 423 aa20.16■□□□□ 0.82
APOBEC3A-204ENST00000495988 PGK2P07205 417 aa20.16■□□□□ 0.82
APOBEC3A-204ENST00000495988 PDE1AP54750 535 aa20.16■□□□□ 0.82
APOBEC3A-204ENST00000495988 FAM47AQ5JRC9 791 aa20.16■□□□□ 0.82
APOBEC3A-204ENST00000495988 PRAMEF19Q5SWL8 479 aa20.16■□□□□ 0.82
APOBEC3A-204ENST00000495988 LRRC47Q8N1G4 583 aaKnown RBP20.16■□□□□ 0.82
APOBEC3A-204ENST00000495988 PRPF38AQ8NAV1 312 aaKnown RBP20.16■□□□□ 0.82
APOBEC3A-204ENST00000495988 NEDD1Q8NHV4 660 aa20.16■□□□□ 0.82
APOBEC3A-204ENST00000495988 GDF15Q99988 308 aa20.16■□□□□ 0.82
APOBEC3A-204ENST00000495988 TEX13BQ9BXU2 312 aa20.16■□□□□ 0.82
APOBEC3A-204ENST00000495988 SYNPO2Q9UMS6 1093 aa20.16■□□□□ 0.82
APOBEC3A-204ENST00000495988 PLIN4Q96Q06 1357 aa20.16■□□□□ 0.82
APOBEC3A-204ENST00000495988 DNM1LO00429 736 aa20.15■□□□□ 0.82
APOBEC3A-204ENST00000495988 SEPT4O43236 478 aa20.15■□□□□ 0.82
APOBEC3A-204ENST00000495988 TFAP4Q01664 338 aa20.15■□□□□ 0.82
APOBEC3A-204ENST00000495988 ANO1Q5XXA6 986 aa20.15■□□□□ 0.82
APOBEC3A-204ENST00000495988 SNRNP48Q6IEG0 339 aaKnown RBP20.15■□□□□ 0.82
APOBEC3A-204ENST00000495988 CTDP1Q9Y5B0 961 aaPredicted RBP20.15■□□□□ 0.82
APOBEC3A-204ENST00000495988 PLXNA1Q9UIW2 1896 aa20.15■□□□□ 0.82
APOBEC3A-204ENST00000495988 FOXP2O15409 715 aa20.14■□□□□ 0.81
APOBEC3A-204ENST00000495988 ZBED4O75132 1171 aa20.14■□□□□ 0.81
APOBEC3A-204ENST00000495988 ARRDC4Q8NCT1 418 aa20.14■□□□□ 0.81
APOBEC3A-204ENST00000495988 GMCL1P1Q8NEA9 526 aa20.14■□□□□ 0.81
APOBEC3A-204ENST00000495988 KIFC2Q96AC6 838 aa20.14■□□□□ 0.81
APOBEC3A-204ENST00000495988 BMP8BP34820 402 aa20.13■□□□□ 0.81
APOBEC3A-204ENST00000495988 MAGEA10P43363 369 aaPredicted RBP20.13■□□□□ 0.81
APOBEC3A-204ENST00000495988 SLC4A3P48751 1232 aa20.13■□□□□ 0.81
APOBEC3A-204ENST00000495988 CTDSPL2Q05D32 466 aa20.13■□□□□ 0.81
APOBEC3A-204ENST00000495988 AAMPQ13685 434 aa20.13■□□□□ 0.81
APOBEC3A-204ENST00000495988 ZNF792Q3KQV3 632 aa20.13■□□□□ 0.81
APOBEC3A-204ENST00000495988 GJC2Q5T442 439 aaPredicted RBP20.13■□□□□ 0.81
APOBEC3A-204ENST00000495988 SLFN13Q68D06 897 aa20.13■□□□□ 0.81
APOBEC3A-204ENST00000495988 CPXCR1Q8N123 301 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms