RNA–Protein interactions for RNA: ENST00000494993.1

HDDC3-203, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,220 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-203ENST00000494993 ADAMTS5Q9UNA0 930 aa26.5■■□□□ 1.83
HDDC3-203ENST00000494993 LTBP2Q14767 1821 aa26.5■■□□□ 1.83
HDDC3-203ENST00000494993 SLC25A27O95847 323 aa26.49■■□□□ 1.83
HDDC3-203ENST00000494993 GPR153Q6NV75 609 aa26.49■■□□□ 1.83
HDDC3-203ENST00000494993 KBTBD3Q8NAB2 608 aa26.49■■□□□ 1.83
HDDC3-203ENST00000494993 GOPCQ9HD26 462 aa26.49■■□□□ 1.83
HDDC3-203ENST00000494993 FBXO28Q9NVF7 368 aa26.49■■□□□ 1.83
HDDC3-203ENST00000494993 SEPT4O43236 478 aa26.48■■□□□ 1.83
HDDC3-203ENST00000494993 FCER1AP12319 257 aa26.48■■□□□ 1.83
HDDC3-203ENST00000494993 SBK1Q52WX2 424 aa26.48■■□□□ 1.83
HDDC3-203ENST00000494993 MAML3Q96JK9 1138 aa26.48■■□□□ 1.83
HDDC3-203ENST00000494993 DCTPP1Q9H773 170 aa26.48■■□□□ 1.83
HDDC3-203ENST00000494993 ATN1P54259 1190 aaPredicted RBP26.47■■□□□ 1.83
HDDC3-203ENST00000494993 MDM2Q00987 491 aaPredicted RBP26.47■■□□□ 1.83
HDDC3-203ENST00000494993 GJC2Q5T442 439 aaPredicted RBP26.47■■□□□ 1.83
HDDC3-203ENST00000494993 GIMAP6Q6P9H5 292 aa26.47■■□□□ 1.83
HDDC3-203ENST00000494993 ARRDC4Q8NCT1 418 aa26.47■■□□□ 1.83
HDDC3-203ENST00000494993 GPATCH3Q96I76 525 aa26.47■■□□□ 1.83
HDDC3-203ENST00000494993 GNL3Q9BVP2 549 aaKnown RBP eCLIP26.47■■□□□ 1.83
HDDC3-203ENST00000494993 PPP1R9AQ9ULJ8 1098 aa26.47■■□□□ 1.83
HDDC3-203ENST00000494993 ROBO3Q96MS0 1386 aa26.46■■□□□ 1.83
HDDC3-203ENST00000494993 GSG1L2A8MUP6 293 aa26.46■■□□□ 1.83
HDDC3-203ENST00000494993 ANO1Q5XXA6 986 aa26.46■■□□□ 1.83
HDDC3-203ENST00000494993 RIOX2Q8IUF8 465 aa26.46■■□□□ 1.83
HDDC3-203ENST00000494993 APPBP2Q92624 585 aa26.46■■□□□ 1.83
HDDC3-203ENST00000494993 OSBP2Q969R2 916 aa26.46■■□□□ 1.83
HDDC3-203ENST00000494993 COL6A3P12111 3177 aa26.46■■□□□ 1.83
HDDC3-203ENST00000494993 VWA5AO00534 786 aa26.45■■□□□ 1.82
HDDC3-203ENST00000494993 RAD21O60216 631 aa26.45■■□□□ 1.82
HDDC3-203ENST00000494993 RASA1P20936 1047 aa26.45■■□□□ 1.82
HDDC3-203ENST00000494993 PRAMEF19Q5SWL8 479 aa26.45■■□□□ 1.82
HDDC3-203ENST00000494993 FAM83BQ5T0W9 1011 aa26.45■■□□□ 1.82
HDDC3-203ENST00000494993 TSHZ3Q63HK5 1081 aa26.45■■□□□ 1.82
HDDC3-203ENST00000494993 MMP19Q99542 508 aa26.45■■□□□ 1.82
HDDC3-203ENST00000494993 KBTBD13C9JR72 458 aa26.44■■□□□ 1.82
HDDC3-203ENST00000494993 RTP1P59025 263 aa26.44■■□□□ 1.82
HDDC3-203ENST00000494993 MKNK2Q9HBH9 465 aa26.44■■□□□ 1.82
HDDC3-203ENST00000494993 ZNF214Q9UL59 606 aaPredicted RBP26.44■■□□□ 1.82
HDDC3-203ENST00000494993 MINDY4BA8MYZ0 360 aa26.43■■□□□ 1.82
HDDC3-203ENST00000494993 RNF113AO15541 343 aaKnown RBP26.43■■□□□ 1.82
HDDC3-203ENST00000494993 STAT3P40763 770 aa26.43■■□□□ 1.82
HDDC3-203ENST00000494993 STK11IPQ8N1F8 1099 aa26.43■■□□□ 1.82
HDDC3-203ENST00000494993 REPS2Q8NFH8 660 aa26.43■■□□□ 1.82
HDDC3-203ENST00000494993 GPAA1O43292 621 aa26.42■■□□□ 1.82
HDDC3-203ENST00000494993 ZFYP08048 801 aaPredicted RBP26.42■■□□□ 1.82
HDDC3-203ENST00000494993 COPB2P35606 906 aa26.42■■□□□ 1.82
HDDC3-203ENST00000494993 DEFB123Q8N688 67 aa26.42■■□□□ 1.82
HDDC3-203ENST00000494993 EPB41L4AQ9HCS5 686 aaPredicted RBP26.42■■□□□ 1.82
HDDC3-203ENST00000494993 NYAP2Q9P242 653 aa26.42■■□□□ 1.82
HDDC3-203ENST00000494993 PGK2P07205 417 aa26.41■■□□□ 1.82
HDDC3-203ENST00000494993 KCTD2Q14681 263 aa26.41■■□□□ 1.82
HDDC3-203ENST00000494993 SLC39A5Q6ZMH5 540 aa26.41■■□□□ 1.82
HDDC3-203ENST00000494993 LBHD1Q9BQE6 289 aaPredicted RBP26.41■■□□□ 1.82
HDDC3-203ENST00000494993 NRBP1Q9UHY1 535 aa26.41■■□□□ 1.82
HDDC3-203ENST00000494993 ATP11BQ9Y2G3 1177 aa26.41■■□□□ 1.82
HDDC3-203ENST00000494993 MYCNP04198 464 aaPredicted RBP26.4■■□□□ 1.82
HDDC3-203ENST00000494993 GNAT2P19087 354 aa26.4■■□□□ 1.82
HDDC3-203ENST00000494993 LRRC41Q15345 812 aa26.4■■□□□ 1.82
HDDC3-203ENST00000494993 ZNF792Q3KQV3 632 aa26.4■■□□□ 1.82
HDDC3-203ENST00000494993 FAM47AQ5JRC9 791 aa26.4■■□□□ 1.82
HDDC3-203ENST00000494993 Q7L0L9 218 aa26.4■■□□□ 1.82
HDDC3-203ENST00000494993 NUP88Q99567 741 aaPredicted RBP26.4■■□□□ 1.82
HDDC3-203ENST00000494993 SLF1Q9BQI6 1058 aa26.4■■□□□ 1.82
HDDC3-203ENST00000494993 PRKAG2Q9UGJ0 569 aa26.4■■□□□ 1.82
HDDC3-203ENST00000494993 DIS3Q9Y2L1 958 aaKnown RBP26.4■■□□□ 1.82
HDDC3-203ENST00000494993 MCM3APO60318 1980 aa26.4■■□□□ 1.82
HDDC3-203ENST00000494993 M0R2C6 588 aa26.39■■□□□ 1.82
HDDC3-203ENST00000494993 TDO2P48775 406 aa26.39■■□□□ 1.82
HDDC3-203ENST00000494993 TINF2Q9BSI4 451 aa26.39■■□□□ 1.82
HDDC3-203ENST00000494993 IGKV6D-41A0A0C4DH26 115 aa26.38■■□□□ 1.81
HDDC3-203ENST00000494993 F5H6K3 240 aa26.38■■□□□ 1.81
HDDC3-203ENST00000494993 NDUFB10O96000 172 aa26.38■■□□□ 1.81
HDDC3-203ENST00000494993 KLRC3Q07444 240 aa26.38■■□□□ 1.81
HDDC3-203ENST00000494993 SNX17Q15036 470 aa26.38■■□□□ 1.81
HDDC3-203ENST00000494993 TTC41PQ6P2S7 1318 aa26.38■■□□□ 1.81
HDDC3-203ENST00000494993 ADCYAP1R1P41586 468 aa26.37■■□□□ 1.81
HDDC3-203ENST00000494993 LRRFIP1Q32MZ4 808 aaKnown RBP26.37■■□□□ 1.81
HDDC3-203ENST00000494993 SLC17A8Q8NDX2 589 aa26.37■■□□□ 1.81
HDDC3-203ENST00000494993 TEX13BQ9BXU2 312 aa26.37■■□□□ 1.81
HDDC3-203ENST00000494993 ZNF287Q9HBT7 754 aa26.37■■□□□ 1.81
HDDC3-203ENST00000494993 CLIP2Q9UDT6 1046 aa26.37■■□□□ 1.81
HDDC3-203ENST00000494993 APPP05067 770 aa26.36■■□□□ 1.81
HDDC3-203ENST00000494993 RARBP10826 455 aa26.36■■□□□ 1.81
HDDC3-203ENST00000494993 TRIM60Q495X7 471 aa26.36■■□□□ 1.81
HDDC3-203ENST00000494993 ZNF444Q8N0Y2 327 aaPredicted RBP26.36■■□□□ 1.81
HDDC3-203ENST00000494993 PRPF38AQ8NAV1 312 aaKnown RBP26.36■■□□□ 1.81
HDDC3-203ENST00000494993 XPNPEP3Q9NQH7 507 aa26.36■■□□□ 1.81
HDDC3-203ENST00000494993 PATL2C9JE40 543 aaKnown RBP26.35■■□□□ 1.81
HDDC3-203ENST00000494993 PRDM1O75626 825 aa26.35■■□□□ 1.81
HDDC3-203ENST00000494993 SNRNP48Q6IEG0 339 aaKnown RBP26.35■■□□□ 1.81
HDDC3-203ENST00000494993 IFNL3Q8IZI9 196 aa26.35■■□□□ 1.81
HDDC3-203ENST00000494993 FERMT2Q96AC1 680 aa26.35■■□□□ 1.81
HDDC3-203ENST00000494993 MTMR10Q9NXD2 777 aa26.35■■□□□ 1.81
HDDC3-203ENST00000494993 LAMA2P24043 3122 aaKnown RBP26.34■■□□□ 1.81
HDDC3-203ENST00000494993 ERC2O15083 957 aa26.34■■□□□ 1.81
HDDC3-203ENST00000494993 TAL1P17542 331 aaPredicted RBP26.34■■□□□ 1.81
HDDC3-203ENST00000494993 C1orf53Q5VUE5 145 aa26.34■■□□□ 1.81
HDDC3-203ENST00000494993 PI4K2BQ8TCG2 481 aa26.34■■□□□ 1.81
HDDC3-203ENST00000494993 MKL1Q969V6 931 aa26.34■■□□□ 1.81
HDDC3-203ENST00000494993 CEP95Q96GE4 821 aa26.34■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms