RNA–Protein interactions for RNA: ENST00000494956.1

NELFE-213, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-213ENST00000494956 MAP2K5Q13163 448 aa12.66□□□□□ -0.38
NELFE-213ENST00000494956 NMIQ13287 307 aaPredicted RBP12.66□□□□□ -0.38
NELFE-213ENST00000494956 UBE2Q1Q7Z7E8 422 aa12.66□□□□□ -0.38
NELFE-213ENST00000494956 ZNF444Q8N0Y2 327 aaPredicted RBP12.66□□□□□ -0.38
NELFE-213ENST00000494956 NKX2-3Q8TAU0 364 aa12.66□□□□□ -0.38
NELFE-213ENST00000494956 SOCS4Q8WXH5 440 aa12.66□□□□□ -0.38
NELFE-213ENST00000494956 LPAR1Q92633 364 aa12.66□□□□□ -0.38
NELFE-213ENST00000494956 CEP95Q96GE4 821 aa12.66□□□□□ -0.38
NELFE-213ENST00000494956 SPATC1LQ9H0A9 340 aa12.66□□□□□ -0.38
NELFE-213ENST00000494956 SH2D4AQ9H788 454 aa12.66□□□□□ -0.38
NELFE-213ENST00000494956 HOXC10Q9NYD6 342 aa12.66□□□□□ -0.38
NELFE-213ENST00000494956 CLIP2Q9UDT6 1046 aa12.66□□□□□ -0.38
NELFE-213ENST00000494956 RPTORQ8N122 1335 aa12.65□□□□□ -0.38
NELFE-213ENST00000494956 FRMPD3Q5JV73 1810 aa12.65□□□□□ -0.38
NELFE-213ENST00000494956 ZKSCAN1P17029 563 aaPredicted RBP12.65□□□□□ -0.38
NELFE-213ENST00000494956 TMEM132BQ14DG7 1078 aa12.65□□□□□ -0.38
NELFE-213ENST00000494956 MAP3K21Q5TCX8 1036 aa12.65□□□□□ -0.38
NELFE-213ENST00000494956 LRRC47Q8N1G4 583 aaKnown RBP12.65□□□□□ -0.38
NELFE-213ENST00000494956 APBA2Q99767 749 aa12.65□□□□□ -0.38
NELFE-213ENST00000494956 NACAP1Q9BZK3 213 aa12.65□□□□□ -0.38
NELFE-213ENST00000494956 CRISPLD2Q9H0B8 497 aa12.65□□□□□ -0.38
NELFE-213ENST00000494956 GOPCQ9HD26 462 aa12.65□□□□□ -0.38
NELFE-213ENST00000494956 HMX1Q9NP08 348 aaPredicted RBP12.65□□□□□ -0.38
NELFE-213ENST00000494956 NYAP2Q9P242 653 aa12.65□□□□□ -0.38
NELFE-213ENST00000494956 PCDH10Q9P2E7 1040 aa12.65□□□□□ -0.38
NELFE-213ENST00000494956 SLC15A5A6NIM6 579 aa12.64□□□□□ -0.39
NELFE-213ENST00000494956 F5H6K3 240 aa12.64□□□□□ -0.39
NELFE-213ENST00000494956 NMT2O60551 498 aa12.64□□□□□ -0.39
NELFE-213ENST00000494956 COBLO75128 1261 aa12.64□□□□□ -0.39
NELFE-213ENST00000494956 NDUFB10O96000 172 aa12.64□□□□□ -0.39
NELFE-213ENST00000494956 XRCC5P13010 732 aaKnown RBP12.64□□□□□ -0.39
NELFE-213ENST00000494956 MNX1P50219 401 aaPredicted RBP12.64□□□□□ -0.39
NELFE-213ENST00000494956 TFAP4Q01664 338 aa12.64□□□□□ -0.39
NELFE-213ENST00000494956 KLRC3Q07444 240 aa12.64□□□□□ -0.39
NELFE-213ENST00000494956 AAMPQ13685 434 aa12.64□□□□□ -0.39
NELFE-213ENST00000494956 GRB14Q14449 540 aa12.64□□□□□ -0.39
NELFE-213ENST00000494956 RASGRP2Q7LDG7 609 aa12.64□□□□□ -0.39
NELFE-213ENST00000494956 NCAPG2Q86XI2 1143 aa12.64□□□□□ -0.39
NELFE-213ENST00000494956 DPF3Q92784 378 aa12.64□□□□□ -0.39
NELFE-213ENST00000494956 PAWRQ96IZ0 340 aaKnown RBP12.64□□□□□ -0.39
NELFE-213ENST00000494956 HELLSQ9NRZ9 838 aa12.64□□□□□ -0.39
NELFE-213ENST00000494956 MTMR4Q9NYA4 1195 aa12.64□□□□□ -0.39
NELFE-213ENST00000494956 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.64□□□□□ -0.39
NELFE-213ENST00000494956 IVNS1ABPQ9Y6Y0 642 aa12.64□□□□□ -0.39
NELFE-213ENST00000494956 H0YGN5 161 aa12.63□□□□□ -0.39
NELFE-213ENST00000494956 TSPY3P0CV98 308 aa12.63□□□□□ -0.39
NELFE-213ENST00000494956 TSPY8P0CW00 308 aa12.63□□□□□ -0.39
NELFE-213ENST00000494956 PDE4AP27815 886 aa12.63□□□□□ -0.39
NELFE-213ENST00000494956 ADORA2AP29274 412 aa12.63□□□□□ -0.39
NELFE-213ENST00000494956 CYP2C19P33261 490 aa12.63□□□□□ -0.39
NELFE-213ENST00000494956 MCMDC2Q4G0Z9 681 aa12.63□□□□□ -0.39
NELFE-213ENST00000494956 NEDD1Q8NHV4 660 aa12.63□□□□□ -0.39
NELFE-213ENST00000494956 PPP1R9AQ9ULJ8 1098 aa12.63□□□□□ -0.39
NELFE-213ENST00000494956 ADAMTS5Q9UNA0 930 aa12.63□□□□□ -0.39
NELFE-213ENST00000494956 PLXNA1Q9UIW2 1896 aa12.63□□□□□ -0.39
NELFE-213ENST00000494956 ZNF236Q9UL36 1845 aa12.62□□□□□ -0.39
NELFE-213ENST00000494956 VWA5AO00534 786 aa12.62□□□□□ -0.39
NELFE-213ENST00000494956 FGAP02671 866 aa12.62□□□□□ -0.39
NELFE-213ENST00000494956 HSPD1P10809 573 aaKnown RBP12.62□□□□□ -0.39
NELFE-213ENST00000494956 SDSP20132 328 aa12.62□□□□□ -0.39
NELFE-213ENST00000494956 SLC4A3P48751 1232 aa12.62□□□□□ -0.39
NELFE-213ENST00000494956 HAND2P61296 217 aa12.62□□□□□ -0.39
NELFE-213ENST00000494956 PDE4BQ07343 736 aa12.62□□□□□ -0.39
NELFE-213ENST00000494956 DPP9Q86TI2 863 aa12.62□□□□□ -0.39
NELFE-213ENST00000494956 TRPV1Q8NER1 839 aa12.62□□□□□ -0.39
NELFE-213ENST00000494956 REPS2Q8NFH8 660 aa12.62□□□□□ -0.39
NELFE-213ENST00000494956 IL17RBQ9NRM6 502 aa12.62□□□□□ -0.39
NELFE-213ENST00000494956 MTMR7Q9Y216 660 aa12.62□□□□□ -0.39
NELFE-213ENST00000494956 PLIN4Q96Q06 1357 aa12.61□□□□□ -0.39
NELFE-213ENST00000494956 TSPY2A6NKD2 308 aa12.61□□□□□ -0.39
NELFE-213ENST00000494956 TTLL1O95922 423 aa12.61□□□□□ -0.39
NELFE-213ENST00000494956 PGK2P07205 417 aa12.61□□□□□ -0.39
NELFE-213ENST00000494956 RRP12Q5JTH9 1297 aaKnown RBP12.61□□□□□ -0.39
NELFE-213ENST00000494956 PRAMEF19Q5SWL8 479 aa12.61□□□□□ -0.39
NELFE-213ENST00000494956 ANO1Q5XXA6 986 aa12.61□□□□□ -0.39
NELFE-213ENST00000494956 MB21D1Q8N884 522 aa12.61□□□□□ -0.39
NELFE-213ENST00000494956 SHCBP1Q8NEM2 672 aa12.61□□□□□ -0.39
NELFE-213ENST00000494956 SLF1Q9BQI6 1058 aa12.61□□□□□ -0.39
NELFE-213ENST00000494956 NBPF3Q9H094 633 aa12.61□□□□□ -0.39
NELFE-213ENST00000494956 IL25Q9H293 177 aa12.61□□□□□ -0.39
NELFE-213ENST00000494956 OSBPL3Q9H4L5 887 aa12.61□□□□□ -0.39
NELFE-213ENST00000494956 TOMM22Q9NS69 142 aa12.61□□□□□ -0.39
NELFE-213ENST00000494956 ZNF214Q9UL59 606 aaPredicted RBP12.61□□□□□ -0.39
NELFE-213ENST00000494956 RIPK3Q9Y572 518 aa12.61□□□□□ -0.39
NELFE-213ENST00000494956 CCDC171Q6TFL3 1326 aa12.61□□□□□ -0.39
NELFE-213ENST00000494956 RANBP6O60518 1105 aaKnown RBP12.6□□□□□ -0.39
NELFE-213ENST00000494956 IGHA2P01877 340 aa12.6□□□□□ -0.39
NELFE-213ENST00000494956 SLC3A2P08195 630 aaKnown RBP12.6□□□□□ -0.39
NELFE-213ENST00000494956 HOXC6P09630 235 aa12.6□□□□□ -0.39
NELFE-213ENST00000494956 CNGA1P29973 690 aa12.6□□□□□ -0.39
NELFE-213ENST00000494956 STAT3P40763 770 aa12.6□□□□□ -0.39
NELFE-213ENST00000494956 SNAP25P60880 206 aa12.6□□□□□ -0.39
NELFE-213ENST00000494956 ALX1Q15699 326 aa12.6□□□□□ -0.39
NELFE-213ENST00000494956 MFSD14CQ5VZR4 134 aa12.6□□□□□ -0.39
NELFE-213ENST00000494956 SLFN13Q68D06 897 aa12.6□□□□□ -0.39
NELFE-213ENST00000494956 LHX8Q68G74 356 aa12.6□□□□□ -0.39
NELFE-213ENST00000494956 CWC27Q6UX04 472 aaKnown RBP12.6□□□□□ -0.39
NELFE-213ENST00000494956 RIOX2Q8IUF8 465 aa12.6□□□□□ -0.39
NELFE-213ENST00000494956 TRMT44Q8IYL2 757 aaKnown RBP12.6□□□□□ -0.39
NELFE-213ENST00000494956 CPXCR1Q8N123 301 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms