RNA–Protein interactions for RNA: ENST00000494675.5

LRIF1-203, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,912 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-203ENST00000494675 CST3P01034 146 aaPredicted RBP4.24□□□□□ -1.73
LRIF1-203ENST00000494675 RAP1GAPP47736 663 aa4.24□□□□□ -1.73
LRIF1-203ENST00000494675 RBL2Q08999 1139 aa4.24□□□□□ -1.73
LRIF1-203ENST00000494675 TMEM67Q5HYA8 995 aa4.24□□□□□ -1.73
LRIF1-203ENST00000494675 SOGA3Q5TF21 947 aa4.24□□□□□ -1.73
LRIF1-203ENST00000494675 PRAMEF13Q5VWM6 474 aa4.24□□□□□ -1.73
LRIF1-203ENST00000494675 ANKS3Q6ZW76 656 aa4.24□□□□□ -1.73
LRIF1-203ENST00000494675 CILP2Q8IUL8 1156 aa4.24□□□□□ -1.73
LRIF1-203ENST00000494675 FAM169BQ8N8A8 192 aa4.24□□□□□ -1.73
LRIF1-203ENST00000494675 PMFBP1Q8TBY8 1022 aa4.24□□□□□ -1.73
LRIF1-203ENST00000494675 TRIM55Q9BYV6 548 aa4.24□□□□□ -1.73
LRIF1-203ENST00000494675 PRDM5Q9NQX1 630 aaPredicted RBP4.24□□□□□ -1.73
LRIF1-203ENST00000494675 CTNND2Q9UQB3 1225 aa4.24□□□□□ -1.73
LRIF1-203ENST00000494675 NME1P15531 152 aaKnown RBP4.23□□□□□ -1.73
LRIF1-203ENST00000494675 GUCY2CP25092 1073 aa4.23□□□□□ -1.73
LRIF1-203ENST00000494675 GBP1P32455 592 aa4.23□□□□□ -1.73
LRIF1-203ENST00000494675 CDCP2Q5VXM1 449 aa4.23□□□□□ -1.73
LRIF1-203ENST00000494675 MIPEPQ99797 713 aa4.23□□□□□ -1.73
LRIF1-203ENST00000494675 CNNM2Q9H8M5 875 aa4.23□□□□□ -1.73
LRIF1-203ENST00000494675 PRDM7Q9NQW5 492 aa4.23□□□□□ -1.73
LRIF1-203ENST00000494675 RAPGEFL1Q9UHV5 662 aa4.23□□□□□ -1.73
LRIF1-203ENST00000494675 TPX2Q9ULW0 747 aaKnown RBP4.23□□□□□ -1.73
LRIF1-203ENST00000494675 FAM86C2PA6NEL3 165 aa4.23□□□□□ -1.73
LRIF1-203ENST00000494675 RBAK-RBAKDNI3L0D1 243 aa4.23□□□□□ -1.73
LRIF1-203ENST00000494675 U2SURPO15042 1029 aaKnown RBP4.23□□□□□ -1.73
LRIF1-203ENST00000494675 SLITRK5O94991 958 aa4.23□□□□□ -1.73
LRIF1-203ENST00000494675 CYP7A1P22680 504 aa4.23□□□□□ -1.73
LRIF1-203ENST00000494675 CHMP4BP1P59074 171 aa4.23□□□□□ -1.73
LRIF1-203ENST00000494675 SFRP5Q5T4F7 317 aa4.23□□□□□ -1.73
LRIF1-203ENST00000494675 INTS3Q68E01 1043 aaKnown RBP4.23□□□□□ -1.73
LRIF1-203ENST00000494675 MPZL3Q6UWV2 235 aa4.23□□□□□ -1.73
LRIF1-203ENST00000494675 TTC6Q86TZ1 520 aa4.23□□□□□ -1.73
LRIF1-203ENST00000494675 SPACA3Q8IXA5 215 aa4.23□□□□□ -1.73
LRIF1-203ENST00000494675 CCDC74BQ96LY2 380 aa4.23□□□□□ -1.73
LRIF1-203ENST00000494675 MAPK8IP1Q9UQF2 711 aa4.23□□□□□ -1.73
LRIF1-203ENST00000494675 PITPNM2Q9BZ72 1349 aa4.22□□□□□ -1.73
LRIF1-203ENST00000494675 POLR2BP30876 1174 aaKnown RBP4.22□□□□□ -1.73
LRIF1-203ENST00000494675 NKPD1Q17RQ9 610 aa4.22□□□□□ -1.73
LRIF1-203ENST00000494675 TTLL10Q6ZVT0 673 aa4.22□□□□□ -1.73
LRIF1-203ENST00000494675 CYB5D2Q8WUJ1 264 aa4.22□□□□□ -1.73
LRIF1-203ENST00000494675 HNRNPLLQ8WVV9 542 aaKnown RBP4.22□□□□□ -1.73
LRIF1-203ENST00000494675 KIRREL1Q96J84 757 aa4.22□□□□□ -1.73
LRIF1-203ENST00000494675 SLC9A7Q96T83 725 aa4.22□□□□□ -1.73
LRIF1-203ENST00000494675 KIF2CQ99661 725 aa4.22□□□□□ -1.73
LRIF1-203ENST00000494675 ACTR10Q9NZ32 417 aa4.22□□□□□ -1.73
LRIF1-203ENST00000494675 SLC12A7Q9Y666 1083 aa4.22□□□□□ -1.73
LRIF1-203ENST00000494675 TNFRSF10CO14798 259 aa4.21□□□□□ -1.74
LRIF1-203ENST00000494675 RGS13O14921 159 aa4.21□□□□□ -1.74
LRIF1-203ENST00000494675 GLI1P08151 1106 aa4.21□□□□□ -1.74
LRIF1-203ENST00000494675 ACRP10323 421 aa4.21□□□□□ -1.74
LRIF1-203ENST00000494675 CCNFP41002 786 aa4.21□□□□□ -1.74
LRIF1-203ENST00000494675 CASP7P55210 303 aa4.21□□□□□ -1.74
LRIF1-203ENST00000494675 NBPF6Q5VWK0 638 aa4.21□□□□□ -1.74
LRIF1-203ENST00000494675 LARP1BQ659C4 914 aaKnown RBP4.21□□□□□ -1.74
LRIF1-203ENST00000494675 ZNF746Q6NUN9 644 aaPredicted RBP4.21□□□□□ -1.74
LRIF1-203ENST00000494675 LETMD1Q6P1Q0 360 aa4.21□□□□□ -1.74
LRIF1-203ENST00000494675 C22orf34Q6ZV56 151 aa4.21□□□□□ -1.74
LRIF1-203ENST00000494675 ANKLE2Q86XL3 938 aa4.21□□□□□ -1.74
LRIF1-203ENST00000494675 C1QL4Q86Z23 238 aa4.21□□□□□ -1.74
LRIF1-203ENST00000494675 TAB3Q8N5C8 712 aaPredicted RBP4.21□□□□□ -1.74
LRIF1-203ENST00000494675 C19orf47Q8N9M1 422 aaKnown RBP4.21□□□□□ -1.74
LRIF1-203ENST00000494675 DHRS1Q96LJ7 313 aa4.21□□□□□ -1.74
LRIF1-203ENST00000494675 NBPF4Q96M43 638 aa4.21□□□□□ -1.74
LRIF1-203ENST00000494675 CARS2Q9HA77 564 aaKnown RBP4.21□□□□□ -1.74
LRIF1-203ENST00000494675 A0A1W2PQH9 124 aa4.21□□□□□ -1.74
LRIF1-203ENST00000494675 KLF4O43474 513 aa4.21□□□□□ -1.74
LRIF1-203ENST00000494675 RAB33AQ14088 237 aa4.21□□□□□ -1.74
LRIF1-203ENST00000494675 ZYXQ15942 572 aaKnown RBP4.21□□□□□ -1.74
LRIF1-203ENST00000494675 UNC5AQ6ZN44 842 aa4.21□□□□□ -1.74
LRIF1-203ENST00000494675 DBX2Q6ZNG2 339 aa4.21□□□□□ -1.74
LRIF1-203ENST00000494675 LCNL1Q6ZST4 164 aa4.21□□□□□ -1.74
LRIF1-203ENST00000494675 SYDE1Q6ZW31 735 aaPredicted RBP4.21□□□□□ -1.74
LRIF1-203ENST00000494675 DPH6Q7L8W6 267 aa4.21□□□□□ -1.74
LRIF1-203ENST00000494675 CDH24Q86UP0 819 aa4.21□□□□□ -1.74
LRIF1-203ENST00000494675 LRRC56Q8IYG6 542 aaPredicted RBP4.21□□□□□ -1.74
LRIF1-203ENST00000494675 RIN3Q8TB24 985 aa4.21□□□□□ -1.74
LRIF1-203ENST00000494675 BAHD1Q8TBE0 780 aaPredicted RBP4.21□□□□□ -1.74
LRIF1-203ENST00000494675 COX4I2Q96KJ9 171 aa4.21□□□□□ -1.74
LRIF1-203ENST00000494675 HSPA12BQ96MM6 686 aa4.21□□□□□ -1.74
LRIF1-203ENST00000494675 CBX7O95931 251 aa4.2□□□□□ -1.74
LRIF1-203ENST00000494675 ETV3P41162 512 aa4.2□□□□□ -1.74
LRIF1-203ENST00000494675 FXNQ16595 210 aa4.2□□□□□ -1.74
LRIF1-203ENST00000494675 CDKAL1Q5VV42 579 aa4.2□□□□□ -1.74
LRIF1-203ENST00000494675 LIN37Q96GY3 246 aaPredicted RBP4.2□□□□□ -1.74
LRIF1-203ENST00000494675 LNPKQ9C0E8 428 aa4.2□□□□□ -1.74
LRIF1-203ENST00000494675 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.2□□□□□ -1.74
LRIF1-203ENST00000494675 ST7Q9NRC1 585 aa4.2□□□□□ -1.74
LRIF1-203ENST00000494675 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.2□□□□□ -1.74
LRIF1-203ENST00000494675 CEP131Q9UPN4 1083 aa4.2□□□□□ -1.74
LRIF1-203ENST00000494675 CNTNAP4Q9C0A0 1308 aa4.19□□□□□ -1.74
LRIF1-203ENST00000494675 ZNF503-AS2A6NEH8 195 aa4.19□□□□□ -1.74
LRIF1-203ENST00000494675 NFIBO00712 420 aa4.19□□□□□ -1.74
LRIF1-203ENST00000494675 CLEC3AO75596 197 aa4.19□□□□□ -1.74
LRIF1-203ENST00000494675 DDAH1O94760 285 aa4.19□□□□□ -1.74
LRIF1-203ENST00000494675 UBOX5O94941 541 aa4.19□□□□□ -1.74
LRIF1-203ENST00000494675 ZSCAN22P10073 491 aaPredicted RBP4.19□□□□□ -1.74
LRIF1-203ENST00000494675 RAC2P15153 192 aa4.19□□□□□ -1.74
LRIF1-203ENST00000494675 GDNFP39905 211 aa4.19□□□□□ -1.74
LRIF1-203ENST00000494675 KIR3DL1P43629 444 aa4.19□□□□□ -1.74
LRIF1-203ENST00000494675 MFSD4AQ8N468 514 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms