RNA–Protein interactions for RNA: ENST00000494667.5

PRKD3-210, Transcript of protein kinase D3, humanhuman

TSL 1 (best)

Gene PRKD3, Length 4,326 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-210ENST00000494667 EZH1Q92800 747 aaPredicted RBP5.37□□□□□ -1.55
PRKD3-210ENST00000494667 FAM227BQ96M60 508 aa5.37□□□□□ -1.55
PRKD3-210ENST00000494667 CCDC114Q96M63 670 aa5.37□□□□□ -1.55
PRKD3-210ENST00000494667 PLCB1Q9NQ66 1216 aa5.37□□□□□ -1.55
PRKD3-210ENST00000494667 TAF6LQ9Y6J9 622 aa5.37□□□□□ -1.55
PRKD3-210ENST00000494667 A0A1W2PQC6 194 aa5.36□□□□□ -1.55
PRKD3-210ENST00000494667 B4DLN1 442 aa5.36□□□□□ -1.55
PRKD3-210ENST00000494667 BAG3O95817 575 aa5.36□□□□□ -1.55
PRKD3-210ENST00000494667 PDIA3P30101 505 aaKnown RBP5.36□□□□□ -1.55
PRKD3-210ENST00000494667 HSPA9P38646 679 aaKnown RBP5.36□□□□□ -1.55
PRKD3-210ENST00000494667 HDLBPQ00341 1268 aaKnown RBP5.36□□□□□ -1.55
PRKD3-210ENST00000494667 GOLGA8FQ08AF8 430 aa5.36□□□□□ -1.55
PRKD3-210ENST00000494667 GOLGA8DPQ0D2H9 430 aa5.36□□□□□ -1.55
PRKD3-210ENST00000494667 PDCLQ13371 301 aa5.36□□□□□ -1.55
PRKD3-210ENST00000494667 NAA25Q14CX7 972 aa5.36□□□□□ -1.55
PRKD3-210ENST00000494667 NCAPH2Q6IBW4 605 aa5.36□□□□□ -1.55
PRKD3-210ENST00000494667 PPFIBP1Q86W92 1011 aa5.36□□□□□ -1.55
PRKD3-210ENST00000494667 KLHDC4Q8TBB5 520 aa5.36□□□□□ -1.55
PRKD3-210ENST00000494667 NSMCE1Q8WV22 266 aa5.36□□□□□ -1.55
PRKD3-210ENST00000494667 NCSTNQ92542 709 aa5.36□□□□□ -1.55
PRKD3-210ENST00000494667 ARL8AQ96BM9 186 aa5.36□□□□□ -1.55
PRKD3-210ENST00000494667 PPP1R14BQ96C90 147 aa5.36□□□□□ -1.55
PRKD3-210ENST00000494667 TRAPPC9Q96Q05 1148 aa5.36□□□□□ -1.55
PRKD3-210ENST00000494667 CCDC28BQ9BUN5 200 aa5.36□□□□□ -1.55
PRKD3-210ENST00000494667 SUDS3Q9H7L9 328 aaPredicted RBP5.36□□□□□ -1.55
PRKD3-210ENST00000494667 TMBIM4Q9HC24 238 aa5.36□□□□□ -1.55
PRKD3-210ENST00000494667 LZTFL1Q9NQ48 299 aa5.36□□□□□ -1.55
PRKD3-210ENST00000494667 TIAM2Q8IVF5 1701 aa5.36□□□□□ -1.55
PRKD3-210ENST00000494667 GMNCA6NCL1 334 aa5.36□□□□□ -1.55
PRKD3-210ENST00000494667 CDC27P30260 824 aa5.36□□□□□ -1.55
PRKD3-210ENST00000494667 FMR1Q06787 632 aaKnown RBP eCLIP5.36□□□□□ -1.55
PRKD3-210ENST00000494667 DYNC1I2Q13409 638 aaKnown RBP5.36□□□□□ -1.55
PRKD3-210ENST00000494667 NUGGCQ68CJ6 796 aa5.36□□□□□ -1.55
PRKD3-210ENST00000494667 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.36□□□□□ -1.55
PRKD3-210ENST00000494667 SH3RF1Q7Z6J0 888 aa5.36□□□□□ -1.55
PRKD3-210ENST00000494667 CREG2Q8IUH2 290 aa5.36□□□□□ -1.55
PRKD3-210ENST00000494667 FAM177A1Q8N128 213 aaPredicted RBP5.36□□□□□ -1.55
PRKD3-210ENST00000494667 WHAMMQ8TF30 809 aa5.36□□□□□ -1.55
PRKD3-210ENST00000494667 IQCDQ96DY2 449 aa5.36□□□□□ -1.55
PRKD3-210ENST00000494667 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.36□□□□□ -1.55
PRKD3-210ENST00000494667 ZFATQ9P243 1243 aa5.36□□□□□ -1.55
PRKD3-210ENST00000494667 NFE2L3Q9Y4A8 694 aa5.36□□□□□ -1.55
PRKD3-210ENST00000494667 LRRC42Q9Y546 428 aa5.36□□□□□ -1.55
PRKD3-210ENST00000494667 ZNF233A6NK53 670 aa5.36□□□□□ -1.55
PRKD3-210ENST00000494667 ASAP2O43150 1006 aa5.36□□□□□ -1.55
PRKD3-210ENST00000494667 CAND2O75155 1236 aa5.36□□□□□ -1.55
PRKD3-210ENST00000494667 LCA5LO95447 670 aa5.36□□□□□ -1.55
PRKD3-210ENST00000494667 EIF4A2Q14240 407 aaKnown RBP5.36□□□□□ -1.55
PRKD3-210ENST00000494667 PABPC1LQ4VXU2 614 aaKnown RBP5.36□□□□□ -1.55
PRKD3-210ENST00000494667 CCDC102BQ68D86 513 aa5.36□□□□□ -1.55
PRKD3-210ENST00000494667 TSEN2Q8NCE0 465 aaKnown RBP5.36□□□□□ -1.55
PRKD3-210ENST00000494667 THOC1Q96FV9 657 aaKnown RBP5.36□□□□□ -1.55
PRKD3-210ENST00000494667 FMNL2Q96PY5 1086 aa5.36□□□□□ -1.55
PRKD3-210ENST00000494667 CDK19Q9BWU1 502 aa5.36□□□□□ -1.55
PRKD3-210ENST00000494667 TSGA10Q9BZW7 698 aa5.36□□□□□ -1.55
PRKD3-210ENST00000494667 ZSWIM4Q9H7M6 989 aa5.36□□□□□ -1.55
PRKD3-210ENST00000494667 LMCD1Q9NZU5 365 aa5.36□□□□□ -1.55
PRKD3-210ENST00000494667 STXBP3O00186 592 aa5.35□□□□□ -1.55
PRKD3-210ENST00000494667 KIF3BO15066 747 aa5.35□□□□□ -1.55
PRKD3-210ENST00000494667 RNF8O76064 485 aa5.35□□□□□ -1.55
PRKD3-210ENST00000494667 TPRNQ4KMQ1 711 aa5.35□□□□□ -1.55
PRKD3-210ENST00000494667 ARHGAP22Q7Z5H3 698 aa5.35□□□□□ -1.55
PRKD3-210ENST00000494667 ZIM3Q96PE6 472 aa5.35□□□□□ -1.55
PRKD3-210ENST00000494667 GORASP1Q9BQQ3 440 aa5.35□□□□□ -1.55
PRKD3-210ENST00000494667 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.35□□□□□ -1.55
PRKD3-210ENST00000494667 HAUS2Q9NVX0 235 aa5.35□□□□□ -1.55
PRKD3-210ENST00000494667 IRAK4Q9NWZ3 460 aa5.35□□□□□ -1.55
PRKD3-210ENST00000494667 CWC25Q9NXE8 425 aaPredicted RBP5.35□□□□□ -1.55
PRKD3-210ENST00000494667 STIM2Q9P246 746 aa5.35□□□□□ -1.55
PRKD3-210ENST00000494667 BLOC1S6Q9UL45 172 aa5.35□□□□□ -1.55
PRKD3-210ENST00000494667 LEMD3Q9Y2U8 911 aa5.35□□□□□ -1.55
PRKD3-210ENST00000494667 PCDHA5Q9Y5H7 936 aa5.35□□□□□ -1.55
PRKD3-210ENST00000494667 RREB1Q92766 1687 aa5.35□□□□□ -1.55
PRKD3-210ENST00000494667 CAMTA1Q9Y6Y1 1673 aa5.35□□□□□ -1.55
PRKD3-210ENST00000494667 A0A0U1RQJ8 604 aa5.35□□□□□ -1.55
PRKD3-210ENST00000494667 CES2O00748 559 aa5.35□□□□□ -1.55
PRKD3-210ENST00000494667 NDUFA10O95299 355 aa5.35□□□□□ -1.55
PRKD3-210ENST00000494667 CYP21A2P08686 494 aa5.35□□□□□ -1.55
PRKD3-210ENST00000494667 VAV2P52735 878 aa5.35□□□□□ -1.55
PRKD3-210ENST00000494667 MRPS35P82673 323 aaKnown RBP5.35□□□□□ -1.55
PRKD3-210ENST00000494667 SPAG1Q07617 926 aa5.35□□□□□ -1.55
PRKD3-210ENST00000494667 CDC37Q16543 378 aaPredicted RBP5.35□□□□□ -1.55
PRKD3-210ENST00000494667 CCDC96Q2M329 555 aa5.35□□□□□ -1.55
PRKD3-210ENST00000494667 ACCSLQ4AC99 568 aa5.35□□□□□ -1.55
PRKD3-210ENST00000494667 SPECC1Q5M775 1068 aa5.35□□□□□ -1.55
PRKD3-210ENST00000494667 ZMYM1Q5SVZ6 1142 aa5.35□□□□□ -1.55
PRKD3-210ENST00000494667 CACNA2D4Q7Z3S7 1137 aa5.35□□□□□ -1.55
PRKD3-210ENST00000494667 ATRIPQ8WXE1 791 aa5.35□□□□□ -1.55
PRKD3-210ENST00000494667 SEC16BQ96JE7 1060 aa5.35□□□□□ -1.55
PRKD3-210ENST00000494667 WDR35Q9P2L0 1181 aa5.35□□□□□ -1.55
PRKD3-210ENST00000494667 SNX12Q9UMY4 172 aa5.35□□□□□ -1.55
PRKD3-210ENST00000494667 PHF24Q9UPV7 400 aa5.35□□□□□ -1.55
PRKD3-210ENST00000494667 FER1L4A9Z1Z3 1794 aa5.35□□□□□ -1.55
PRKD3-210ENST00000494667 H0YGN5 161 aa5.35□□□□□ -1.55
PRKD3-210ENST00000494667 ORC4O43929 436 aa5.35□□□□□ -1.55
PRKD3-210ENST00000494667 ATP1A1P05023 1023 aaKnown RBP5.35□□□□□ -1.55
PRKD3-210ENST00000494667 HERVK_113P62684 666 aa5.35□□□□□ -1.55
PRKD3-210ENST00000494667 KRT83P78385 493 aa5.35□□□□□ -1.55
PRKD3-210ENST00000494667 AKAP17AQ02040 695 aaKnown RBP5.35□□□□□ -1.55
PRKD3-210ENST00000494667 TMED1Q13445 227 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms