RNA–Protein interactions for RNA: ENST00000494649.5

APTX-230, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 2,099 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-230ENST00000494649 ATG4CQ96DT6 458 aa13.08□□□□□ -0.32
APTX-230ENST00000494649 TCP11L1Q9NUJ3 509 aa13.08□□□□□ -0.32
APTX-230ENST00000494649 SNX14Q9Y5W7 946 aa13.08□□□□□ -0.32
APTX-230ENST00000494649 ADGRA2Q96PE1 1338 aa13.07□□□□□ -0.32
APTX-230ENST00000494649 SPDYE16A6NNV3 312 aaPredicted RBP13.07□□□□□ -0.32
APTX-230ENST00000494649 WDR46O15213 610 aaKnown RBP13.07□□□□□ -0.32
APTX-230ENST00000494649 PRC1O43663 620 aa13.07□□□□□ -0.32
APTX-230ENST00000494649 FKTNO75072 461 aa13.07□□□□□ -0.32
APTX-230ENST00000494649 TOP1P11387 765 aaKnown RBP13.07□□□□□ -0.32
APTX-230ENST00000494649 CTGFP29279 349 aa13.07□□□□□ -0.32
APTX-230ENST00000494649 SNAP25P60880 206 aa13.07□□□□□ -0.32
APTX-230ENST00000494649 IFIT1BQ5T764 474 aaKnown RBP13.07□□□□□ -0.32
APTX-230ENST00000494649 KIFC2Q96AC6 838 aa13.07□□□□□ -0.32
APTX-230ENST00000494649 JAKMIP1Q96N16 626 aaKnown RBP13.07□□□□□ -0.32
APTX-230ENST00000494649 CPVLQ9H3G5 476 aa13.07□□□□□ -0.32
APTX-230ENST00000494649 KAT14Q9H8E8 782 aa13.07□□□□□ -0.32
APTX-230ENST00000494649 ZCCHC17Q9NP64 241 aaKnown RBP13.07□□□□□ -0.32
APTX-230ENST00000494649 GPCPD1Q9NPB8 672 aa13.07□□□□□ -0.32
APTX-230ENST00000494649 SLC45A1Q9Y2W3 748 aa13.07□□□□□ -0.32
APTX-230ENST00000494649 TMEM232C9JQI7 657 aa13.06□□□□□ -0.32
APTX-230ENST00000494649 SLC16A2P36021 539 aa13.06□□□□□ -0.32
APTX-230ENST00000494649 PLS1Q14651 629 aa13.06□□□□□ -0.32
APTX-230ENST00000494649 Q3C1V9 767 aa13.06□□□□□ -0.32
APTX-230ENST00000494649 TMEM67Q5HYA8 995 aa13.06□□□□□ -0.32
APTX-230ENST00000494649 TTBK2Q6IQ55 1244 aa13.06□□□□□ -0.32
APTX-230ENST00000494649 PNMA1Q8ND90 353 aa13.06□□□□□ -0.32
APTX-230ENST00000494649 GMCL1P1Q8NEA9 526 aa13.06□□□□□ -0.32
APTX-230ENST00000494649 NEK1Q96PY6 1258 aa13.06□□□□□ -0.32
APTX-230ENST00000494649 MYL10Q9BUA6 226 aa13.06□□□□□ -0.32
APTX-230ENST00000494649 CFHR5Q9BXR6 569 aa13.06□□□□□ -0.32
APTX-230ENST00000494649 RBPJLQ9UBG7 517 aa13.06□□□□□ -0.32
APTX-230ENST00000494649 ERICH2A1L162 156 aa13.06□□□□□ -0.32
APTX-230ENST00000494649 BCRP11274 1271 aa13.06□□□□□ -0.32
APTX-230ENST00000494649 BMP3P12645 472 aa13.06□□□□□ -0.32
APTX-230ENST00000494649 COG2Q14746 738 aa13.06□□□□□ -0.32
APTX-230ENST00000494649 BTBD7Q9P203 1132 aa13.06□□□□□ -0.32
APTX-230ENST00000494649 RXRAP19793 462 aa13.05□□□□□ -0.32
APTX-230ENST00000494649 MCM5P33992 734 aa13.05□□□□□ -0.32
APTX-230ENST00000494649 NOVP48745 357 aa13.05□□□□□ -0.32
APTX-230ENST00000494649 LACTBP83111 547 aaPredicted RBP13.05□□□□□ -0.32
APTX-230ENST00000494649 WTAPQ15007 396 aa13.05□□□□□ -0.32
APTX-230ENST00000494649 SEC23AQ15436 765 aa13.05□□□□□ -0.32
APTX-230ENST00000494649 WDR78Q5VTH9 848 aa13.05□□□□□ -0.32
APTX-230ENST00000494649 DGKHQ86XP1 1220 aa13.05□□□□□ -0.32
APTX-230ENST00000494649 PDHBP11177 359 aa13.04□□□□□ -0.32
APTX-230ENST00000494649 TAL1P17542 331 aaPredicted RBP13.04□□□□□ -0.32
APTX-230ENST00000494649 TTC14Q96N46 770 aa13.04□□□□□ -0.32
APTX-230ENST00000494649 TRIM17Q9Y577 477 aa13.04□□□□□ -0.32
APTX-230ENST00000494649 CNMDO75829 334 aa13.04□□□□□ -0.32
APTX-230ENST00000494649 FMNL1O95466 1100 aaPredicted RBP13.04□□□□□ -0.32
APTX-230ENST00000494649 CASTP20810 708 aaKnown RBP13.04□□□□□ -0.32
APTX-230ENST00000494649 DSG3P32926 999 aa13.04□□□□□ -0.32
APTX-230ENST00000494649 PSMC4P43686 418 aa13.04□□□□□ -0.32
APTX-230ENST00000494649 SART3Q15020 963 aaKnown RBP13.04□□□□□ -0.32
APTX-230ENST00000494649 PPP4R3BQ5MIZ7 849 aa13.04□□□□□ -0.32
APTX-230ENST00000494649 NFXL1Q6ZNB6 911 aa13.04□□□□□ -0.32
APTX-230ENST00000494649 CCDC144CPQ8IYA2 1237 aa13.04□□□□□ -0.32
APTX-230ENST00000494649 CPXCR1Q8N123 301 aa13.04□□□□□ -0.32
APTX-230ENST00000494649 IGDCC4Q8TDY8 1250 aa13.04□□□□□ -0.32
APTX-230ENST00000494649 NUP133Q8WUM0 1156 aa13.04□□□□□ -0.32
APTX-230ENST00000494649 SLF1Q9BQI6 1058 aa13.04□□□□□ -0.32
APTX-230ENST00000494649 UPF3BQ9BZI7 483 aaKnown RBP13.04□□□□□ -0.32
APTX-230ENST00000494649 UBA5Q9GZZ9 404 aa13.04□□□□□ -0.32
APTX-230ENST00000494649 PORCNQ9H237 461 aa13.04□□□□□ -0.32
APTX-230ENST00000494649 EFCC1Q9HA90 598 aa13.04□□□□□ -0.32
APTX-230ENST00000494649 PPP1R9AQ9ULJ8 1098 aa13.04□□□□□ -0.32
APTX-230ENST00000494649 GCLCP48506 637 aaPredicted RBP13.03□□□□□ -0.32
APTX-230ENST00000494649 STAT2P52630 851 aa13.03□□□□□ -0.32
APTX-230ENST00000494649 ERVK-9P63128 1117 aa13.03□□□□□ -0.32
APTX-230ENST00000494649 ERVK-24P63145 666 aa13.03□□□□□ -0.32
APTX-230ENST00000494649 FAM110CQ1W6H9 321 aa13.03□□□□□ -0.32
APTX-230ENST00000494649 GPRC5AQ8NFJ5 357 aa13.03□□□□□ -0.32
APTX-230ENST00000494649 GMCL1Q96IK5 515 aa13.03□□□□□ -0.32
APTX-230ENST00000494649 TRIM47Q96LD4 638 aa13.03□□□□□ -0.32
APTX-230ENST00000494649 LARP6Q9BRS8 491 aaKnown RBP13.03□□□□□ -0.32
APTX-230ENST00000494649 LY9Q9HBG7 655 aa13.03□□□□□ -0.32
APTX-230ENST00000494649 HOXC10Q9NYD6 342 aa13.03□□□□□ -0.32
APTX-230ENST00000494649 NAP1L2Q9ULW6 460 aaPredicted RBP13.03□□□□□ -0.32
APTX-230ENST00000494649 VWA5AO00534 786 aa13.03□□□□□ -0.32
APTX-230ENST00000494649 TMEM132BQ14DG7 1078 aa13.03□□□□□ -0.32
APTX-230ENST00000494649 CCDC174Q6PII3 467 aa13.03□□□□□ -0.32
APTX-230ENST00000494649 CCAR1Q8IX12 1150 aaKnown RBP13.03□□□□□ -0.32
APTX-230ENST00000494649 STAG2Q8N3U4 1231 aa13.03□□□□□ -0.32
APTX-230ENST00000494649 SH2B2O14492 632 aaPredicted RBP13.02□□□□□ -0.33
APTX-230ENST00000494649 FGD1P98174 961 aa13.02□□□□□ -0.33
APTX-230ENST00000494649 KRT32Q14532 448 aa13.02□□□□□ -0.33
APTX-230ENST00000494649 KIF22Q14807 665 aa13.02□□□□□ -0.33
APTX-230ENST00000494649 LBX2Q6XYB7 198 aa13.02□□□□□ -0.33
APTX-230ENST00000494649 DHX32Q7L7V1 743 aaKnown RBP13.02□□□□□ -0.33
APTX-230ENST00000494649 ERO1AQ96HE7 468 aa13.02□□□□□ -0.33
APTX-230ENST00000494649 RAVER2Q9HCJ3 691 aaKnown RBP13.02□□□□□ -0.33
APTX-230ENST00000494649 PRDM10Q9NQV6 1147 aa13.02□□□□□ -0.33
APTX-230ENST00000494649 RLFQ13129 1914 aa13.02□□□□□ -0.33
APTX-230ENST00000494649 TNPO2O14787 897 aaKnown RBP13.01□□□□□ -0.33
APTX-230ENST00000494649 ZNF543Q08ER8 600 aa13.01□□□□□ -0.33
APTX-230ENST00000494649 TSGA10IPQ3SY00 556 aa13.01□□□□□ -0.33
APTX-230ENST00000494649 CCDC178Q5BJE1 867 aa13.01□□□□□ -0.33
APTX-230ENST00000494649 BLOC1S2Q6QNY1 142 aa13.01□□□□□ -0.33
APTX-230ENST00000494649 OTOP1Q7RTM1 612 aa13.01□□□□□ -0.33
APTX-230ENST00000494649 PRPF38AQ8NAV1 312 aaKnown RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms