RNA–Protein interactions for RNA: ENST00000494571.1

ATG3-207, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 2,758 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-207ENST00000494571 ERICH1Q86X53 443 aa4.5□□□□□ -1.69
ATG3-207ENST00000494571 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.5□□□□□ -1.69
ATG3-207ENST00000494571 WDR66Q8TBY9 1149 aa4.5□□□□□ -1.69
ATG3-207ENST00000494571 MAGEC3Q8TD91 643 aa4.5□□□□□ -1.69
ATG3-207ENST00000494571 HPS3Q969F9 1004 aa4.5□□□□□ -1.69
ATG3-207ENST00000494571 SLC35B4Q969S0 331 aa4.5□□□□□ -1.69
ATG3-207ENST00000494571 DTNBP1Q96EV8 351 aa4.5□□□□□ -1.69
ATG3-207ENST00000494571 CYFIP2Q96F07 1278 aa4.5□□□□□ -1.69
ATG3-207ENST00000494571 TCEANC2Q96MN5 208 aa4.5□□□□□ -1.69
ATG3-207ENST00000494571 USP28Q96RU2 1077 aa4.5□□□□□ -1.69
ATG3-207ENST00000494571 SRPK1Q96SB4 655 aaKnown RBP4.5□□□□□ -1.69
ATG3-207ENST00000494571 SLF1Q9BQI6 1058 aa4.5□□□□□ -1.69
ATG3-207ENST00000494571 TCHPQ9BT92 498 aa4.5□□□□□ -1.69
ATG3-207ENST00000494571 SIL1Q9H173 461 aa4.5□□□□□ -1.69
ATG3-207ENST00000494571 EPN3Q9H201 632 aa4.5□□□□□ -1.69
ATG3-207ENST00000494571 SLC5A4Q9NY91 659 aa4.5□□□□□ -1.69
ATG3-207ENST00000494571 BARX2Q9UMQ3 279 aaPredicted RBP4.5□□□□□ -1.69
ATG3-207ENST00000494571 PHF24Q9UPV7 400 aa4.5□□□□□ -1.69
ATG3-207ENST00000494571 SPO11Q9Y5K1 396 aa4.5□□□□□ -1.69
ATG3-207ENST00000494571 ATP10BO94823 1461 aa4.5□□□□□ -1.69
ATG3-207ENST00000494571 CCDC141Q6ZP82 1450 aa4.5□□□□□ -1.69
ATG3-207ENST00000494571 ITSN2Q9NZM3 1697 aa4.49□□□□□ -1.69
ATG3-207ENST00000494571 A6NHS1 94 aa4.49□□□□□ -1.69
ATG3-207ENST00000494571 SOWAHDA6NJG2 315 aa4.49□□□□□ -1.69
ATG3-207ENST00000494571 ENC1O14682 589 aa4.49□□□□□ -1.69
ATG3-207ENST00000494571 P4HA2O15460 535 aa4.49□□□□□ -1.69
ATG3-207ENST00000494571 MGRN1O60291 552 aa4.49□□□□□ -1.69
ATG3-207ENST00000494571 RAPGEF3O95398 923 aa4.49□□□□□ -1.69
ATG3-207ENST00000494571 MLH1P40692 756 aa4.49□□□□□ -1.69
ATG3-207ENST00000494571 MATR3P43243 847 aaKnown RBP eCLIP4.49□□□□□ -1.69
ATG3-207ENST00000494571 NNTQ13423 1086 aa4.49□□□□□ -1.69
ATG3-207ENST00000494571 RCN1Q15293 331 aa4.49□□□□□ -1.69
ATG3-207ENST00000494571 KIAA0753Q2KHM9 967 aa4.49□□□□□ -1.69
ATG3-207ENST00000494571 RPAP2Q8IXW5 612 aaPredicted RBP4.49□□□□□ -1.69
ATG3-207ENST00000494571 STK11IPQ8N1F8 1099 aa4.49□□□□□ -1.69
ATG3-207ENST00000494571 AGAP3Q96P47 875 aa4.49□□□□□ -1.69
ATG3-207ENST00000494571 SYT15Q9BQS2 421 aa4.49□□□□□ -1.69
ATG3-207ENST00000494571 OSBPL10Q9BXB5 764 aa4.49□□□□□ -1.69
ATG3-207ENST00000494571 SLC7A5P2Q9GIP4 190 aa4.49□□□□□ -1.69
ATG3-207ENST00000494571 PHAXQ9H814 394 aaKnown RBP4.49□□□□□ -1.69
ATG3-207ENST00000494571 VIPAS39Q9H9C1 493 aa4.49□□□□□ -1.69
ATG3-207ENST00000494571 THRAP3Q9Y2W1 955 aaKnown RBP4.49□□□□□ -1.69
ATG3-207ENST00000494571 ERBINQ96RT1 1412 aa4.49□□□□□ -1.69
ATG3-207ENST00000494571 A2ML1A8K2U0 1454 aa4.49□□□□□ -1.69
ATG3-207ENST00000494571 PLCH2O75038 1416 aa4.49□□□□□ -1.69
ATG3-207ENST00000494571 A8MUI8 341 aa4.49□□□□□ -1.69
ATG3-207ENST00000494571 GOLGA8KD6RF30 607 aa4.49□□□□□ -1.69
ATG3-207ENST00000494571 AKR1B10O60218 316 aa4.49□□□□□ -1.69
ATG3-207ENST00000494571 SRGAP2O75044 1071 aa4.49□□□□□ -1.69
ATG3-207ENST00000494571 PPP1R37O75864 691 aa4.49□□□□□ -1.69
ATG3-207ENST00000494571 MMEP08473 750 aa4.49□□□□□ -1.69
ATG3-207ENST00000494571 ETS2P15036 469 aa4.49□□□□□ -1.69
ATG3-207ENST00000494571 KCNJ6P48051 423 aa4.49□□□□□ -1.69
ATG3-207ENST00000494571 ME1P48163 572 aa4.49□□□□□ -1.69
ATG3-207ENST00000494571 PIP4K2BP78356 416 aa4.49□□□□□ -1.69
ATG3-207ENST00000494571 KLC1Q07866 573 aa4.49□□□□□ -1.69
ATG3-207ENST00000494571 BTG3Q14201 252 aaPredicted RBP4.49□□□□□ -1.69
ATG3-207ENST00000494571 TTMPQ5BVD1 217 aa4.49□□□□□ -1.69
ATG3-207ENST00000494571 RASIP1Q5U651 963 aa4.49□□□□□ -1.69
ATG3-207ENST00000494571 RBM43Q6ZSC3 357 aaKnown RBP4.49□□□□□ -1.69
ATG3-207ENST00000494571 FAM47EQ6ZV65 393 aa4.49□□□□□ -1.69
ATG3-207ENST00000494571 YTHDF3Q7Z739 585 aaKnown RBP4.49□□□□□ -1.69
ATG3-207ENST00000494571 LMNTD2Q8IXW0 634 aa4.49□□□□□ -1.69
ATG3-207ENST00000494571 SIX5Q8N196 739 aa4.49□□□□□ -1.69
ATG3-207ENST00000494571 FSIP1Q8NA03 581 aa4.49□□□□□ -1.69
ATG3-207ENST00000494571 EHBP1Q8NDI1 1231 aa4.49□□□□□ -1.69
ATG3-207ENST00000494571 ANKRD24Q8TF21 1146 aa4.49□□□□□ -1.69
ATG3-207ENST00000494571 ZFAND2BQ8WV99 257 aa4.49□□□□□ -1.69
ATG3-207ENST00000494571 NAF1Q96HR8 494 aaKnown RBP4.49□□□□□ -1.69
ATG3-207ENST00000494571 RMDN2Q96LZ7 410 aa4.49□□□□□ -1.69
ATG3-207ENST00000494571 SGIP1Q9BQI5 828 aa4.49□□□□□ -1.69
ATG3-207ENST00000494571 EIF4ENIF1Q9NRA8 985 aaKnown RBP4.49□□□□□ -1.69
ATG3-207ENST00000494571 AASDHPPTQ9NRN7 309 aa4.49□□□□□ -1.69
ATG3-207ENST00000494571 MKS1Q9NXB0 559 aa4.49□□□□□ -1.69
ATG3-207ENST00000494571 ATXN10Q9UBB4 475 aa4.49□□□□□ -1.69
ATG3-207ENST00000494571 GGT7Q9UJ14 662 aa4.49□□□□□ -1.69
ATG3-207ENST00000494571 MBD5Q9P267 1494 aa4.49□□□□□ -1.69
ATG3-207ENST00000494571 VWDEQ8N2E2 1590 aa4.49□□□□□ -1.69
ATG3-207ENST00000494571 NUTM2FA1L443 756 aa4.48□□□□□ -1.69
ATG3-207ENST00000494571 SMIM23A6NLE4 172 aa4.48□□□□□ -1.69
ATG3-207ENST00000494571 H3BQV1 296 aa4.48□□□□□ -1.69
ATG3-207ENST00000494571 CETN3O15182 167 aa4.48□□□□□ -1.69
ATG3-207ENST00000494571 HSF2BPO75031 334 aa4.48□□□□□ -1.69
ATG3-207ENST00000494571 TMCC1O94876 653 aa4.48□□□□□ -1.69
ATG3-207ENST00000494571 CCNFP41002 786 aa4.48□□□□□ -1.69
ATG3-207ENST00000494571 SERPINB4P48594 390 aa4.48□□□□□ -1.69
ATG3-207ENST00000494571 GUCY2FP51841 1108 aa4.48□□□□□ -1.69
ATG3-207ENST00000494571 HDAC4P56524 1084 aa4.48□□□□□ -1.69
ATG3-207ENST00000494571 CDC37Q16543 378 aaPredicted RBP4.48□□□□□ -1.69
ATG3-207ENST00000494571 ODF2Q5BJF6 829 aa4.48□□□□□ -1.69
ATG3-207ENST00000494571 C6orf183Q5T699 404 aa4.48□□□□□ -1.69
ATG3-207ENST00000494571 IFFO2Q5TF58 517 aa4.48□□□□□ -1.69
ATG3-207ENST00000494571 TMEM53Q6P2H8 277 aa4.48□□□□□ -1.69
ATG3-207ENST00000494571 LARP1Q6PKG0 1096 aaKnown RBP4.48□□□□□ -1.69
ATG3-207ENST00000494571 ZNF365Q70YC5 407 aa4.48□□□□□ -1.69
ATG3-207ENST00000494571 BRAPQ7Z569 592 aa4.48□□□□□ -1.69
ATG3-207ENST00000494571 CACNA2D3Q8IZS8 1091 aa4.48□□□□□ -1.69
ATG3-207ENST00000494571 ZBTB8BQ8NAP8 495 aaPredicted RBP4.48□□□□□ -1.69
ATG3-207ENST00000494571 SLC43A3Q8NBI5 491 aa4.48□□□□□ -1.69
ATG3-207ENST00000494571 KIF12Q96FN5 646 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms