RNA–Protein interactions for RNA: ENST00000494446.1

FN1-225, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 676 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-225ENST00000494446 SLC4A7Q9Y6M7 1214 aa8.43□□□□□ -1.06
FN1-225ENST00000494446 MROH7Q68CQ1 1323 aa8.43□□□□□ -1.06
FN1-225ENST00000494446 MYH8P13535 1937 aa8.42□□□□□ -1.06
FN1-225ENST00000494446 ZBBXA8MT70 800 aa8.42□□□□□ -1.06
FN1-225ENST00000494446 ST18O60284 1047 aa8.42□□□□□ -1.06
FN1-225ENST00000494446 GH2P01242 217 aa8.42□□□□□ -1.06
FN1-225ENST00000494446 ATXN8OSP0DMR3 200 aa8.42□□□□□ -1.06
FN1-225ENST00000494446 ALADP13716 330 aa8.42□□□□□ -1.06
FN1-225ENST00000494446 TAL1P17542 331 aaPredicted RBP8.42□□□□□ -1.06
FN1-225ENST00000494446 VCAM1P19320 739 aa8.42□□□□□ -1.06
FN1-225ENST00000494446 RFX5P48382 616 aaPredicted RBP8.42□□□□□ -1.06
FN1-225ENST00000494446 CLCN6P51797 869 aa8.42□□□□□ -1.06
FN1-225ENST00000494446 USP14P54578 494 aa8.42□□□□□ -1.06
FN1-225ENST00000494446 EXOSC9Q06265 439 aaKnown RBP8.42□□□□□ -1.06
FN1-225ENST00000494446 PLS1Q14651 629 aa8.42□□□□□ -1.06
FN1-225ENST00000494446 KCNA10Q16322 511 aa8.42□□□□□ -1.06
FN1-225ENST00000494446 NCAPG2Q86XI2 1143 aa8.42□□□□□ -1.06
FN1-225ENST00000494446 MAPKAPK5Q8IW41 473 aa8.42□□□□□ -1.06
FN1-225ENST00000494446 GJD3Q8N144 294 aa8.42□□□□□ -1.06
FN1-225ENST00000494446 NOL10Q9BSC4 688 aaKnown RBP8.42□□□□□ -1.06
FN1-225ENST00000494446 SPATC1LQ9H0A9 340 aa8.42□□□□□ -1.06
FN1-225ENST00000494446 RPAP3Q9H6T3 665 aaPredicted RBP8.42□□□□□ -1.06
FN1-225ENST00000494446 FANCIQ9NVI1 1328 aa8.42□□□□□ -1.06
FN1-225ENST00000494446 SYNRGQ9UMZ2 1314 aa8.41□□□□□ -1.06
FN1-225ENST00000494446 MOXD2PA6NHM9 499 aa8.41□□□□□ -1.06
FN1-225ENST00000494446 EPOPA6NHQ4 379 aa8.41□□□□□ -1.06
FN1-225ENST00000494446 TLR3O15455 904 aaKnown RBP8.41□□□□□ -1.06
FN1-225ENST00000494446 ADAMTS4O75173 837 aa8.41□□□□□ -1.06
FN1-225ENST00000494446 AKR1A1P14550 325 aa8.41□□□□□ -1.06
FN1-225ENST00000494446 CDK7P50613 346 aa8.41□□□□□ -1.06
FN1-225ENST00000494446 RAB3GAP1Q15042 981 aa8.41□□□□□ -1.06
FN1-225ENST00000494446 TMEM67Q5HYA8 995 aa8.41□□□□□ -1.06
FN1-225ENST00000494446 TBC1D9Q6ZT07 1266 aa8.41□□□□□ -1.06
FN1-225ENST00000494446 WWC1Q8IX03 1113 aa8.41□□□□□ -1.06
FN1-225ENST00000494446 SHCBP1Q8NEM2 672 aa8.41□□□□□ -1.06
FN1-225ENST00000494446 ACER1Q8TDN7 264 aa8.41□□□□□ -1.06
FN1-225ENST00000494446 TGFBRAP1Q8WUH2 860 aa8.41□□□□□ -1.06
FN1-225ENST00000494446 ARNTL2Q8WYA1 636 aa8.41□□□□□ -1.06
FN1-225ENST00000494446 NSUN4Q96CB9 384 aaKnown RBP8.41□□□□□ -1.06
FN1-225ENST00000494446 CDCA7LQ96GN5 454 aa8.41□□□□□ -1.06
FN1-225ENST00000494446 GLT1D1Q96MS3 346 aa8.41□□□□□ -1.06
FN1-225ENST00000494446 RAI14Q9P0K7 980 aa8.41□□□□□ -1.06
FN1-225ENST00000494446 SAP30BPQ9UHR5 308 aaKnown RBP8.41□□□□□ -1.06
FN1-225ENST00000494446 PALD1Q9ULE6 856 aa8.41□□□□□ -1.06
FN1-225ENST00000494446 PTPRSQ13332 1948 aa8.41□□□□□ -1.06
FN1-225ENST00000494446 PTPRZ1P23471 2315 aaPredicted RBP8.4□□□□□ -1.06
FN1-225ENST00000494446 ELP1O95163 1332 aa8.4□□□□□ -1.06
FN1-225ENST00000494446 IL16Q14005 1332 aa8.4□□□□□ -1.06
FN1-225ENST00000494446 PDS5AQ29RF7 1337 aaKnown RBP8.4□□□□□ -1.06
FN1-225ENST00000494446 ARVCFO00192 962 aa8.4□□□□□ -1.06
FN1-225ENST00000494446 CA3P07451 260 aa8.4□□□□□ -1.06
FN1-225ENST00000494446 FCER1AP12319 257 aa8.4□□□□□ -1.06
FN1-225ENST00000494446 ATP2A2P16615 1042 aaKnown RBP8.4□□□□□ -1.06
FN1-225ENST00000494446 CCL23P55773 120 aa8.4□□□□□ -1.06
FN1-225ENST00000494446 TIMM10P62072 90 aa8.4□□□□□ -1.06
FN1-225ENST00000494446 FOXK2Q01167 660 aa8.4□□□□□ -1.06
FN1-225ENST00000494446 COG2Q14746 738 aa8.4□□□□□ -1.06
FN1-225ENST00000494446 FAM178BQ8IXR5 827 aa8.4□□□□□ -1.06
FN1-225ENST00000494446 KLHDC9Q8NEP7 349 aa8.4□□□□□ -1.06
FN1-225ENST00000494446 ANKS1AQ92625 1134 aa8.4□□□□□ -1.06
FN1-225ENST00000494446 TINF2Q9BSI4 451 aa8.4□□□□□ -1.06
FN1-225ENST00000494446 TANGO6Q9C0B7 1094 aa8.4□□□□□ -1.06
FN1-225ENST00000494446 KIAA1683Q9H0B3 1180 aa8.4□□□□□ -1.06
FN1-225ENST00000494446 MROH8Q9H579 483 aa8.4□□□□□ -1.06
FN1-225ENST00000494446 HOXC10Q9NYD6 342 aa8.4□□□□□ -1.06
FN1-225ENST00000494446 NRBP1Q9UHY1 535 aa8.4□□□□□ -1.06
FN1-225ENST00000494446 FLT1P17948 1338 aa8.39□□□□□ -1.07
FN1-225ENST00000494446 UMODL1Q5DID0 1318 aa8.39□□□□□ -1.07
FN1-225ENST00000494446 A0A0U1RQG5 324 aaPredicted RBP8.39□□□□□ -1.07
FN1-225ENST00000494446 MYADML2A6NDP7 307 aa8.39□□□□□ -1.07
FN1-225ENST00000494446 HLA-DOAP06340 250 aa8.39□□□□□ -1.07
FN1-225ENST00000494446 PGK2P07205 417 aa8.39□□□□□ -1.07
FN1-225ENST00000494446 ASGR1P07306 291 aa8.39□□□□□ -1.07
FN1-225ENST00000494446 C6orf222P0C671 652 aaPredicted RBP8.39□□□□□ -1.07
FN1-225ENST00000494446 ZNF865P0CJ78 1059 aaPredicted RBP8.39□□□□□ -1.07
FN1-225ENST00000494446 IRX5P78411 483 aaPredicted RBP8.39□□□□□ -1.07
FN1-225ENST00000494446 CCDC27Q2M243 656 aa8.39□□□□□ -1.07
FN1-225ENST00000494446 METTL16Q86W50 562 aaKnown RBP8.39□□□□□ -1.07
FN1-225ENST00000494446 FAM126BQ8IXS8 530 aa8.39□□□□□ -1.07
FN1-225ENST00000494446 RPUSD2Q8IZ73 545 aaKnown RBP8.39□□□□□ -1.07
FN1-225ENST00000494446 ABRAQ8N0Z2 381 aa8.39□□□□□ -1.07
FN1-225ENST00000494446 MMP19Q99542 508 aa8.39□□□□□ -1.07
FN1-225ENST00000494446 HIPK3Q9H422 1215 aa8.39□□□□□ -1.07
FN1-225ENST00000494446 AATFQ9NY61 560 aaKnown RBP eCLIP8.39□□□□□ -1.07
FN1-225ENST00000494446 TRIP12Q14669 1992 aaPredicted RBP8.39□□□□□ -1.07
FN1-225ENST00000494446 CACNA1BQ00975 2339 aa8.38□□□□□ -1.07
FN1-225ENST00000494446 DCXO43602 365 aa8.38□□□□□ -1.07
FN1-225ENST00000494446 CIAO1O76071 339 aa8.38□□□□□ -1.07
FN1-225ENST00000494446 BAG3O95817 575 aa8.38□□□□□ -1.07
FN1-225ENST00000494446 GRB10Q13322 594 aa8.38□□□□□ -1.07
FN1-225ENST00000494446 MKRN4PQ13434 485 aaPredicted RBP8.38□□□□□ -1.07
FN1-225ENST00000494446 CCSAPQ6IQ19 270 aaPredicted RBP8.38□□□□□ -1.07
FN1-225ENST00000494446 PI16Q6UXB8 463 aa8.38□□□□□ -1.07
FN1-225ENST00000494446 ATF7IPQ6VMQ6 1270 aa8.38□□□□□ -1.07
FN1-225ENST00000494446 PCSK9Q8NBP7 692 aaKnown RBP8.38□□□□□ -1.07
FN1-225ENST00000494446 USP44Q9H0E7 712 aa8.38□□□□□ -1.07
FN1-225ENST00000494446 UBE2ZQ9H832 354 aaPredicted RBP8.38□□□□□ -1.07
FN1-225ENST00000494446 HMG20BQ9P0W2 317 aa8.38□□□□□ -1.07
FN1-225ENST00000494446 LRP2BPQ9P2M1 347 aa8.38□□□□□ -1.07
FN1-225ENST00000494446 FAM184BQ9ULE4 1060 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms