RNA–Protein interactions for RNA: ENST00000494323.5

PTCD3-219, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 540 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-219ENST00000494323 SPRED3Q2MJR0 410 aa7.01□□□□□ -1.29
PTCD3-219ENST00000494323 RPS26P11Q5JNZ5 115 aaPredicted RBP7.01□□□□□ -1.29
PTCD3-219ENST00000494323 C9orf131Q5VYM1 1079 aa7.01□□□□□ -1.29
PTCD3-219ENST00000494323 GDF6Q6KF10 455 aaPredicted RBP7.01□□□□□ -1.29
PTCD3-219ENST00000494323 ZNF530Q6P9A1 599 aaPredicted RBP7.01□□□□□ -1.29
PTCD3-219ENST00000494323 WFDC8Q8IUA0 241 aa7.01□□□□□ -1.29
PTCD3-219ENST00000494323 FMR1NBQ8N0W7 255 aaPredicted RBP7.01□□□□□ -1.29
PTCD3-219ENST00000494323 TMEM87AQ8NBN3 555 aa7.01□□□□□ -1.29
PTCD3-219ENST00000494323 LACRTQ9GZZ8 138 aa7.01□□□□□ -1.29
PTCD3-219ENST00000494323 PANK3Q9H999 370 aa7.01□□□□□ -1.29
PTCD3-219ENST00000494323 SRP68Q9UHB9 627 aaKnown RBP7.01□□□□□ -1.29
PTCD3-219ENST00000494323 SOX13Q9UN79 622 aa7.01□□□□□ -1.29
PTCD3-219ENST00000494323 MYH14Q7Z406 1995 aaKnown RBP7□□□□□ -1.29
PTCD3-219ENST00000494323 PXDNLA1KZ92 1463 aa7□□□□□ -1.29
PTCD3-219ENST00000494323 SELPP16109 830 aa7□□□□□ -1.29
PTCD3-219ENST00000494323 CHRNA5P30532 468 aa7□□□□□ -1.29
PTCD3-219ENST00000494323 NRG1Q02297 640 aaPredicted RBP7□□□□□ -1.29
PTCD3-219ENST00000494323 TAF1CQ15572 869 aaPredicted RBP7□□□□□ -1.29
PTCD3-219ENST00000494323 GRIK5Q16478 980 aa7□□□□□ -1.29
PTCD3-219ENST00000494323 DTWD1Q8N5C7 304 aa7□□□□□ -1.29
PTCD3-219ENST00000494323 PCGF6Q9BYE7 350 aa7□□□□□ -1.29
PTCD3-219ENST00000494323 CLEC4MQ9H2X3 399 aaPredicted RBP7□□□□□ -1.29
PTCD3-219ENST00000494323 ZNF576Q9H609 170 aa7□□□□□ -1.29
PTCD3-219ENST00000494323 METTL5Q9NRN9 209 aaKnown RBP7□□□□□ -1.29
PTCD3-219ENST00000494323 PIM2Q9P1W9 311 aa7□□□□□ -1.29
PTCD3-219ENST00000494323 AKAP2Q9Y2D5 859 aa7□□□□□ -1.29
PTCD3-219ENST00000494323 PKD1L3Q7Z443 1732 aa7□□□□□ -1.29
PTCD3-219ENST00000494323 HSP90AB1P08238 724 aaKnown RBP6.99□□□□□ -1.29
PTCD3-219ENST00000494323 CRKLP46109 303 aaKnown RBP6.99□□□□□ -1.29
PTCD3-219ENST00000494323 ADGRE1Q14246 886 aa6.99□□□□□ -1.29
PTCD3-219ENST00000494323 AMOTQ4VCS5 1084 aa6.99□□□□□ -1.29
PTCD3-219ENST00000494323 DALRD3Q5D0E6 543 aaKnown RBP6.99□□□□□ -1.29
PTCD3-219ENST00000494323 C1orf141Q5JVX7 400 aa6.99□□□□□ -1.29
PTCD3-219ENST00000494323 SHISA2Q6UWI4 295 aa6.99□□□□□ -1.29
PTCD3-219ENST00000494323 IL22RA1Q8N6P7 574 aa6.99□□□□□ -1.29
PTCD3-219ENST00000494323 LENG1Q96BZ8 264 aaPredicted RBP6.99□□□□□ -1.29
PTCD3-219ENST00000494323 CEP44Q9C0F1 390 aa6.99□□□□□ -1.29
PTCD3-219ENST00000494323 SEMA6BQ9H3T3 888 aa6.99□□□□□ -1.29
PTCD3-219ENST00000494323 LGR6Q9HBX8 967 aa6.99□□□□□ -1.29
PTCD3-219ENST00000494323 TPSG1Q9NRR2 321 aa6.99□□□□□ -1.29
PTCD3-219ENST00000494323 TTF2Q9UNY4 1162 aaKnown RBP6.99□□□□□ -1.29
PTCD3-219ENST00000494323 PPME1Q9Y570 386 aa6.99□□□□□ -1.29
PTCD3-219ENST00000494323 NCAPD2Q15021 1401 aa6.99□□□□□ -1.29
PTCD3-219ENST00000494323 CICQ96RK0 1608 aaPredicted RBP6.98□□□□□ -1.29
PTCD3-219ENST00000494323 EIF4EBP3O60516 100 aaPredicted RBP6.98□□□□□ -1.29
PTCD3-219ENST00000494323 ERCC5P28715 1186 aaPredicted RBP6.98□□□□□ -1.29
PTCD3-219ENST00000494323 DDR1Q08345 913 aa6.98□□□□□ -1.29
PTCD3-219ENST00000494323 MBTPS1Q14703 1052 aa6.98□□□□□ -1.29
PTCD3-219ENST00000494323 SULT6B1Q6IMI4 303 aa6.98□□□□□ -1.29
PTCD3-219ENST00000494323 INTS5Q6P9B9 1019 aaKnown RBP6.98□□□□□ -1.29
PTCD3-219ENST00000494323 VN1R5Q7Z5H4 357 aa6.98□□□□□ -1.29
PTCD3-219ENST00000494323 MORC1Q86VD1 984 aa6.98□□□□□ -1.29
PTCD3-219ENST00000494323 NT5DC4Q86YG4 428 aa6.98□□□□□ -1.29
PTCD3-219ENST00000494323 C16orf71Q8IYS4 520 aaPredicted RBP6.98□□□□□ -1.29
PTCD3-219ENST00000494323 SH2B1Q9NRF2 756 aaPredicted RBP6.98□□□□□ -1.29
PTCD3-219ENST00000494323 CNTNAP4Q9C0A0 1308 aa6.98□□□□□ -1.29
PTCD3-219ENST00000494323 KDRP35968 1356 aa6.97□□□□□ -1.29
PTCD3-219ENST00000494323 H3BRJ5 948 aa6.97□□□□□ -1.29
PTCD3-219ENST00000494323 HSPA5P11021 654 aaKnown RBP6.97□□□□□ -1.29
PTCD3-219ENST00000494323 EPHA1P21709 976 aa6.97□□□□□ -1.29
PTCD3-219ENST00000494323 TM4SF1P30408 202 aa6.97□□□□□ -1.29
PTCD3-219ENST00000494323 ZNF76P36508 570 aa6.97□□□□□ -1.29
PTCD3-219ENST00000494323 PCDH1Q08174 1060 aa6.97□□□□□ -1.29
PTCD3-219ENST00000494323 SLC39A6Q13433 755 aa6.97□□□□□ -1.29
PTCD3-219ENST00000494323 IKBKEQ14164 716 aa6.97□□□□□ -1.29
PTCD3-219ENST00000494323 RSPO4Q2I0M5 234 aaPredicted RBP6.97□□□□□ -1.29
PTCD3-219ENST00000494323 MEI1Q5TIA1 1274 aa6.97□□□□□ -1.29
PTCD3-219ENST00000494323 FAM117BQ6P1L5 589 aa6.97□□□□□ -1.29
PTCD3-219ENST00000494323 ADAMTSL4Q6UY14 1074 aa6.97□□□□□ -1.29
PTCD3-219ENST00000494323 TXNRD3Q86VQ6 643 aa6.97□□□□□ -1.29
PTCD3-219ENST00000494323 DNAJC10Q8IXB1 793 aa6.97□□□□□ -1.29
PTCD3-219ENST00000494323 NOC4LQ9BVI4 516 aaKnown RBP6.97□□□□□ -1.29
PTCD3-219ENST00000494323 RNF181Q9P0P0 153 aa6.97□□□□□ -1.29
PTCD3-219ENST00000494323 USP42Q9H9J4 1324 aaKnown RBP6.97□□□□□ -1.29
PTCD3-219ENST00000494323 KDM6AO15550 1401 aaPredicted RBP6.96□□□□□ -1.3
PTCD3-219ENST00000494323 C10orf71Q711Q0 1435 aa6.96□□□□□ -1.3
PTCD3-219ENST00000494323 POLRMTO00411 1230 aaKnown RBP6.96□□□□□ -1.3
PTCD3-219ENST00000494323 B3GALT4O96024 378 aa6.96□□□□□ -1.3
PTCD3-219ENST00000494323 IL13P35225 146 aa6.96□□□□□ -1.3
PTCD3-219ENST00000494323 NAALADL2Q58DX5 795 aa6.96□□□□□ -1.3
PTCD3-219ENST00000494323 SV2BQ7L1I2 683 aa6.96□□□□□ -1.3
PTCD3-219ENST00000494323 FBXO11Q86XK2 927 aa6.96□□□□□ -1.3
PTCD3-219ENST00000494323 MAP4K3Q8IVH8 894 aa6.96□□□□□ -1.3
PTCD3-219ENST00000494323 WNT8BQ93098 351 aa6.96□□□□□ -1.3
PTCD3-219ENST00000494323 RNF34Q969K3 372 aa6.96□□□□□ -1.3
PTCD3-219ENST00000494323 SRA1Q9HD15 236 aaKnown RBP6.96□□□□□ -1.3
PTCD3-219ENST00000494323 KIF13BQ9NQT8 1826 aa6.96□□□□□ -1.3
PTCD3-219ENST00000494323 KIAA1551Q9HCM1 1747 aa6.96□□□□□ -1.3
PTCD3-219ENST00000494323 HMOX1P09601 288 aa6.95□□□□□ -1.3
PTCD3-219ENST00000494323 ESRRAP11474 423 aaPredicted RBP6.95□□□□□ -1.3
PTCD3-219ENST00000494323 ARL4DP49703 201 aa6.95□□□□□ -1.3
PTCD3-219ENST00000494323 PPP2R3AQ06190 1150 aa6.95□□□□□ -1.3
PTCD3-219ENST00000494323 NFIXQ14938 502 aa6.95□□□□□ -1.3
PTCD3-219ENST00000494323 CCDC85BQ15834 202 aaPredicted RBP6.95□□□□□ -1.3
PTCD3-219ENST00000494323 NKAPLQ5M9Q1 402 aa6.95□□□□□ -1.3
PTCD3-219ENST00000494323 TPTE2Q6XPS3 522 aa6.95□□□□□ -1.3
PTCD3-219ENST00000494323 SREK1Q8WXA9 508 aaKnown RBP6.95□□□□□ -1.3
PTCD3-219ENST00000494323 TINF2Q9BSI4 451 aa6.95□□□□□ -1.3
PTCD3-219ENST00000494323 SOX17Q9H6I2 414 aaPredicted RBP6.95□□□□□ -1.3
PTCD3-219ENST00000494323 SLC52A2Q9HAB3 445 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms