RNA–Protein interactions for RNA: ENST00000494274.5

RBM39-239, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 704 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-239ENST00000494274 TICAM2Q86XR7 235 aa8.58□□□□□ -1.04
RBM39-239ENST00000494274 LRRC47Q8N1G4 583 aaKnown RBP8.58□□□□□ -1.04
RBM39-239ENST00000494274 USP6NLQ92738 828 aa8.58□□□□□ -1.04
RBM39-239ENST00000494274 MKL1Q969V6 931 aa8.58□□□□□ -1.04
RBM39-239ENST00000494274 TACC3Q9Y6A5 838 aa8.58□□□□□ -1.04
RBM39-239ENST00000494274 ROBO3Q96MS0 1386 aa8.58□□□□□ -1.04
RBM39-239ENST00000494274 CCDC171Q6TFL3 1326 aa8.57□□□□□ -1.04
RBM39-239ENST00000494274 RPTORQ8N122 1335 aa8.57□□□□□ -1.04
RBM39-239ENST00000494274 TMEM232C9JQI7 657 aa8.57□□□□□ -1.04
RBM39-239ENST00000494274 HIP1O00291 1037 aa8.57□□□□□ -1.04
RBM39-239ENST00000494274 VWA5AO00534 786 aa8.57□□□□□ -1.04
RBM39-239ENST00000494274 ZNF213O14771 459 aa8.57□□□□□ -1.04
RBM39-239ENST00000494274 STRNO43815 780 aa8.57□□□□□ -1.04
RBM39-239ENST00000494274 ZBED4O75132 1171 aa8.57□□□□□ -1.04
RBM39-239ENST00000494274 BMP3P12645 472 aa8.57□□□□□ -1.04
RBM39-239ENST00000494274 PRKAR2AP13861 404 aaKnown RBP8.57□□□□□ -1.04
RBM39-239ENST00000494274 MCCP23508 829 aa8.57□□□□□ -1.04
RBM39-239ENST00000494274 ADORA2AP29274 412 aa8.57□□□□□ -1.04
RBM39-239ENST00000494274 CNGA1P29973 690 aa8.57□□□□□ -1.04
RBM39-239ENST00000494274 CACNB2Q08289 660 aaPredicted RBP8.57□□□□□ -1.04
RBM39-239ENST00000494274 IKQ13123 557 aaPredicted RBP8.57□□□□□ -1.04
RBM39-239ENST00000494274 TMEM132BQ14DG7 1078 aa8.57□□□□□ -1.04
RBM39-239ENST00000494274 MFSD14CQ5VZR4 134 aa8.57□□□□□ -1.04
RBM39-239ENST00000494274 SLFN13Q68D06 897 aa8.57□□□□□ -1.04
RBM39-239ENST00000494274 MFSD6Q6ZSS7 791 aa8.57□□□□□ -1.04
RBM39-239ENST00000494274 TRMT44Q8IYL2 757 aaKnown RBP8.57□□□□□ -1.04
RBM39-239ENST00000494274 CPXCR1Q8N123 301 aa8.57□□□□□ -1.04
RBM39-239ENST00000494274 PRPF38AQ8NAV1 312 aaKnown RBP8.57□□□□□ -1.04
RBM39-239ENST00000494274 DPF3Q92784 378 aa8.57□□□□□ -1.04
RBM39-239ENST00000494274 KIFC2Q96AC6 838 aa8.57□□□□□ -1.04
RBM39-239ENST00000494274 SHISA4Q96DD7 197 aa8.57□□□□□ -1.04
RBM39-239ENST00000494274 APBA2Q99767 749 aa8.57□□□□□ -1.04
RBM39-239ENST00000494274 SLF1Q9BQI6 1058 aa8.57□□□□□ -1.04
RBM39-239ENST00000494274 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.57□□□□□ -1.04
RBM39-239ENST00000494274 MROH8Q9H579 483 aa8.57□□□□□ -1.04
RBM39-239ENST00000494274 IL17RBQ9NRM6 502 aa8.57□□□□□ -1.04
RBM39-239ENST00000494274 ANAPC4Q9UJX5 808 aa8.57□□□□□ -1.04
RBM39-239ENST00000494274 PPP1R9AQ9ULJ8 1098 aa8.57□□□□□ -1.04
RBM39-239ENST00000494274 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.57□□□□□ -1.04
RBM39-239ENST00000494274 DOCK1Q14185 1865 aa8.57□□□□□ -1.04
RBM39-239ENST00000494274 MYO5AQ9Y4I1 1855 aaKnown RBP8.57□□□□□ -1.04
RBM39-239ENST00000494274 ORC4O43929 436 aa8.56□□□□□ -1.04
RBM39-239ENST00000494274 FARP2O94887 1054 aaPredicted RBP8.56□□□□□ -1.04
RBM39-239ENST00000494274 SLC25A27O95847 323 aa8.56□□□□□ -1.04
RBM39-239ENST00000494274 FCER1AP12319 257 aa8.56□□□□□ -1.04
RBM39-239ENST00000494274 CYP2C19P33261 490 aa8.56□□□□□ -1.04
RBM39-239ENST00000494274 SLC1A4P43007 532 aa8.56□□□□□ -1.04
RBM39-239ENST00000494274 GRB14Q14449 540 aa8.56□□□□□ -1.04
RBM39-239ENST00000494274 KCTD2Q14681 263 aa8.56□□□□□ -1.04
RBM39-239ENST00000494274 PPP4R3BQ5MIZ7 849 aa8.56□□□□□ -1.04
RBM39-239ENST00000494274 TTC22Q5TAA0 569 aa8.56□□□□□ -1.04
RBM39-239ENST00000494274 RIOX2Q8IUF8 465 aa8.56□□□□□ -1.04
RBM39-239ENST00000494274 SHCBP1Q8NEM2 672 aa8.56□□□□□ -1.04
RBM39-239ENST00000494274 NPLOC4Q8TAT6 608 aa8.56□□□□□ -1.04
RBM39-239ENST00000494274 RAVER2Q9HCJ3 691 aaKnown RBP8.56□□□□□ -1.04
RBM39-239ENST00000494274 PAK6Q9NQU5 681 aaPredicted RBP8.56□□□□□ -1.04
RBM39-239ENST00000494274 SLC5A4Q9NY91 659 aa8.56□□□□□ -1.04
RBM39-239ENST00000494274 FLRT1Q9NZU1 646 aa8.56□□□□□ -1.04
RBM39-239ENST00000494274 FEM1BQ9UK73 627 aa8.56□□□□□ -1.04
RBM39-239ENST00000494274 ADAMTS5Q9UNA0 930 aa8.56□□□□□ -1.04
RBM39-239ENST00000494274 SIPA1L1O43166 1804 aa8.56□□□□□ -1.04
RBM39-239ENST00000494274 COBLO75128 1261 aa8.55□□□□□ -1.04
RBM39-239ENST00000494274 PGK2P07205 417 aa8.55□□□□□ -1.04
RBM39-239ENST00000494274 FGRP09769 529 aa8.55□□□□□ -1.04
RBM39-239ENST00000494274 GSPT1P15170 499 aaKnown RBP8.55□□□□□ -1.04
RBM39-239ENST00000494274 CCND3P30281 292 aaPredicted RBP8.55□□□□□ -1.04
RBM39-239ENST00000494274 AKNAD1Q5T1N1 836 aa8.55□□□□□ -1.04
RBM39-239ENST00000494274 PRPF38BQ5VTL8 546 aaKnown RBP8.55□□□□□ -1.04
RBM39-239ENST00000494274 SNRNP48Q6IEG0 339 aaKnown RBP8.55□□□□□ -1.04
RBM39-239ENST00000494274 RCSD1Q6JBY9 416 aa8.55□□□□□ -1.04
RBM39-239ENST00000494274 KCTD1Q719H9 257 aa8.55□□□□□ -1.04
RBM39-239ENST00000494274 GMCL1P1Q8NEA9 526 aa8.55□□□□□ -1.04
RBM39-239ENST00000494274 CHURC1Q8WUH1 139 aa8.55□□□□□ -1.04
RBM39-239ENST00000494274 DDX11Q96FC9 970 aa8.55□□□□□ -1.04
RBM39-239ENST00000494274 PAWRQ96IZ0 340 aaKnown RBP8.55□□□□□ -1.04
RBM39-239ENST00000494274 MMP19Q99542 508 aa8.55□□□□□ -1.04
RBM39-239ENST00000494274 RNF41Q9H4P4 317 aaPredicted RBP8.55□□□□□ -1.04
RBM39-239ENST00000494274 HOXC6P09630 235 aa8.54□□□□□ -1.04
RBM39-239ENST00000494274 SNAP25P60880 206 aa8.54□□□□□ -1.04
RBM39-239ENST00000494274 IMMTQ16891 758 aaKnown RBP8.54□□□□□ -1.04
RBM39-239ENST00000494274 CCDC96Q2M329 555 aa8.54□□□□□ -1.04
RBM39-239ENST00000494274 PRAMEF19Q5SWL8 479 aa8.54□□□□□ -1.04
RBM39-239ENST00000494274 MAP3K21Q5TCX8 1036 aa8.54□□□□□ -1.04
RBM39-239ENST00000494274 NECAB2Q7Z6G3 386 aa8.54□□□□□ -1.04
RBM39-239ENST00000494274 TBC1D10CQ8IV04 446 aa8.54□□□□□ -1.04
RBM39-239ENST00000494274 ABRAQ8N0Z2 381 aa8.54□□□□□ -1.04
RBM39-239ENST00000494274 REPS2Q8NFH8 660 aa8.54□□□□□ -1.04
RBM39-239ENST00000494274 STAG1Q8WVM7 1258 aa8.54□□□□□ -1.04
RBM39-239ENST00000494274 RUFY2Q8WXA3 655 aa8.54□□□□□ -1.04
RBM39-239ENST00000494274 ESR2Q92731 530 aa8.54□□□□□ -1.04
RBM39-239ENST00000494274 TMEM47Q9BQJ4 181 aa8.54□□□□□ -1.04
RBM39-239ENST00000494274 ZKSCAN3Q9BRR0 538 aa8.54□□□□□ -1.04
RBM39-239ENST00000494274 HTATIP2Q9BUP3 242 aa8.54□□□□□ -1.04
RBM39-239ENST00000494274 DSCC1Q9BVC3 393 aa8.54□□□□□ -1.04
RBM39-239ENST00000494274 TEX13BQ9BXU2 312 aa8.54□□□□□ -1.04
RBM39-239ENST00000494274 GPCPD1Q9NPB8 672 aa8.54□□□□□ -1.04
RBM39-239ENST00000494274 CTNNA3Q9UI47 895 aa8.54□□□□□ -1.04
RBM39-239ENST00000494274 ZNF214Q9UL59 606 aaPredicted RBP8.54□□□□□ -1.04
RBM39-239ENST00000494274 SYNPO2Q9UMS6 1093 aa8.54□□□□□ -1.04
RBM39-239ENST00000494274 RIPK3Q9Y572 518 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms