RNA–Protein interactions for RNA: ENST00000494016.1

CPSF7-213, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-213ENST00000494016 EYA2O00167 538 aa7.2□□□□□ -1.26
CPSF7-213ENST00000494016 HIP1O00291 1037 aa7.2□□□□□ -1.26
CPSF7-213ENST00000494016 CIAO1O76071 339 aa7.2□□□□□ -1.26
CPSF7-213ENST00000494016 BAG4O95429 457 aaKnown RBP7.2□□□□□ -1.26
CPSF7-213ENST00000494016 APBA3O96018 575 aa7.2□□□□□ -1.26
CPSF7-213ENST00000494016 EPXP11678 715 aa7.2□□□□□ -1.26
CPSF7-213ENST00000494016 TIMM10P62072 90 aa7.2□□□□□ -1.26
CPSF7-213ENST00000494016 NUCB2P80303 420 aa7.2□□□□□ -1.26
CPSF7-213ENST00000494016 MAP3K10Q02779 954 aa7.2□□□□□ -1.26
CPSF7-213ENST00000494016 KCNA1Q09470 495 aa7.2□□□□□ -1.26
CPSF7-213ENST00000494016 PKP1Q13835 747 aa7.2□□□□□ -1.26
CPSF7-213ENST00000494016 LRRC24Q50LG9 513 aa7.2□□□□□ -1.26
CPSF7-213ENST00000494016 FAM196AQ6ZSG2 479 aa7.2□□□□□ -1.26
CPSF7-213ENST00000494016 KIAA1211Q6ZU35 1233 aa7.2□□□□□ -1.26
CPSF7-213ENST00000494016 RAB44Q7Z6P3 723 aaPredicted RBP7.2□□□□□ -1.26
CPSF7-213ENST00000494016 ATCAYQ86WG3 371 aa7.2□□□□□ -1.26
CPSF7-213ENST00000494016 SYNE4Q8N205 404 aa7.2□□□□□ -1.26
CPSF7-213ENST00000494016 GPR152Q8TDT2 470 aa7.2□□□□□ -1.26
CPSF7-213ENST00000494016 BHMTQ93088 406 aa7.2□□□□□ -1.26
CPSF7-213ENST00000494016 EDC3Q96F86 508 aaKnown RBP7.2□□□□□ -1.26
CPSF7-213ENST00000494016 INTS4Q96HW7 963 aaKnown RBP7.2□□□□□ -1.26
CPSF7-213ENST00000494016 HAUS7Q99871 368 aa7.2□□□□□ -1.26
CPSF7-213ENST00000494016 PLA2G12BQ9BX93 195 aa7.2□□□□□ -1.26
CPSF7-213ENST00000494016 PUS3Q9BZE2 481 aaKnown RBP7.2□□□□□ -1.26
CPSF7-213ENST00000494016 UPF3BQ9BZI7 483 aaKnown RBP7.2□□□□□ -1.26
CPSF7-213ENST00000494016 SPON1Q9HCB6 807 aa7.2□□□□□ -1.26
CPSF7-213ENST00000494016 DIAPH3Q9NSV4 1193 aa7.2□□□□□ -1.26
CPSF7-213ENST00000494016 MAP3K15Q6ZN16 1313 aa7.2□□□□□ -1.26
CPSF7-213ENST00000494016 UTRNP46939 3433 aa7.2□□□□□ -1.26
CPSF7-213ENST00000494016 A0A0D9SFI3 127 aa7.19□□□□□ -1.26
CPSF7-213ENST00000494016 KCNQ2O43526 872 aa7.19□□□□□ -1.26
CPSF7-213ENST00000494016 XYLBO75191 536 aa7.19□□□□□ -1.26
CPSF7-213ENST00000494016 TAF5LO75529 589 aa7.19□□□□□ -1.26
CPSF7-213ENST00000494016 IL15P40933 162 aaPredicted RBP7.19□□□□□ -1.26
CPSF7-213ENST00000494016 C1QTNF8P60827 252 aa7.19□□□□□ -1.26
CPSF7-213ENST00000494016 TRIP4Q15650 581 aaPredicted RBP7.19□□□□□ -1.26
CPSF7-213ENST00000494016 ECM1Q16610 540 aa7.19□□□□□ -1.26
CPSF7-213ENST00000494016 ADCK5Q3MIX3 580 aa7.19□□□□□ -1.26
CPSF7-213ENST00000494016 RUFY3Q7L099 469 aa7.19□□□□□ -1.26
CPSF7-213ENST00000494016 NLRP10Q86W26 655 aa7.19□□□□□ -1.26
CPSF7-213ENST00000494016 MARCH10Q8NA82 808 aaPredicted RBP7.19□□□□□ -1.26
CPSF7-213ENST00000494016 ZBTB38Q8NAP3 1195 aaPredicted RBP7.19□□□□□ -1.26
CPSF7-213ENST00000494016 GALNT6Q8NCL4 622 aa7.19□□□□□ -1.26
CPSF7-213ENST00000494016 EDARADDQ8WWZ3 215 aa7.19□□□□□ -1.26
CPSF7-213ENST00000494016 TNFRSF25Q93038 417 aa7.19□□□□□ -1.26
CPSF7-213ENST00000494016 GBP4Q96PP9 640 aa7.19□□□□□ -1.26
CPSF7-213ENST00000494016 PSMG3-AS1Q96PY0 264 aa7.19□□□□□ -1.26
CPSF7-213ENST00000494016 TM6SF1Q9BZW5 370 aa7.19□□□□□ -1.26
CPSF7-213ENST00000494016 ZBTB1Q9Y2K1 713 aa7.19□□□□□ -1.26
CPSF7-213ENST00000494016 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.19□□□□□ -1.26
CPSF7-213ENST00000494016 CEP350Q5VT06 3117 aa7.19□□□□□ -1.26
CPSF7-213ENST00000494016 NUP98P52948 1817 aa7.19□□□□□ -1.26
CPSF7-213ENST00000494016 CCDC171Q6TFL3 1326 aa7.19□□□□□ -1.26
CPSF7-213ENST00000494016 ADARB2-AS1A8MUL3 147 aa7.18□□□□□ -1.26
CPSF7-213ENST00000494016 ERVV-1B6SEH8 477 aa7.18□□□□□ -1.26
CPSF7-213ENST00000494016 SHISA8B8ZZ34 492 aa7.18□□□□□ -1.26
CPSF7-213ENST00000494016 H3BRB1 525 aa7.18□□□□□ -1.26
CPSF7-213ENST00000494016 ADAM23O75077 832 aa7.18□□□□□ -1.26
CPSF7-213ENST00000494016 MAP3K6O95382 1288 aa7.18□□□□□ -1.26
CPSF7-213ENST00000494016 CHGBP05060 677 aa7.18□□□□□ -1.26
CPSF7-213ENST00000494016 CPA1P15085 419 aa7.18□□□□□ -1.26
CPSF7-213ENST00000494016 NFKB1P19838 968 aa7.18□□□□□ -1.26
CPSF7-213ENST00000494016 MZF1P28698 734 aaPredicted RBP7.18□□□□□ -1.26
CPSF7-213ENST00000494016 EIF5P55010 431 aaKnown RBP7.18□□□□□ -1.26
CPSF7-213ENST00000494016 DDB1Q16531 1140 aa7.18□□□□□ -1.26
CPSF7-213ENST00000494016 SKOR2Q2VWA4 1001 aaPredicted RBP7.18□□□□□ -1.26
CPSF7-213ENST00000494016 CREB3L3Q68CJ9 461 aa7.18□□□□□ -1.26
CPSF7-213ENST00000494016 PRPF40BQ6NWY9 871 aaKnown RBP7.18□□□□□ -1.26
CPSF7-213ENST00000494016 KANK3Q6NY19 840 aa7.18□□□□□ -1.26
CPSF7-213ENST00000494016 INTS5Q6P9B9 1019 aaKnown RBP7.18□□□□□ -1.26
CPSF7-213ENST00000494016 KIF6Q6ZMV9 814 aa7.18□□□□□ -1.26
CPSF7-213ENST00000494016 ZNF34Q8IZ26 560 aa7.18□□□□□ -1.26
CPSF7-213ENST00000494016 FAM89AQ96GI7 184 aa7.18□□□□□ -1.26
CPSF7-213ENST00000494016 NEUROD6Q96NK8 337 aa7.18□□□□□ -1.26
CPSF7-213ENST00000494016 PNMA5Q96PV4 448 aa7.18□□□□□ -1.26
CPSF7-213ENST00000494016 FSD1Q9BTV5 496 aa7.18□□□□□ -1.26
CPSF7-213ENST00000494016 TUT1Q9H6E5 874 aaKnown RBP7.18□□□□□ -1.26
CPSF7-213ENST00000494016 ENAMQ9NRM1 1142 aa7.18□□□□□ -1.26
CPSF7-213ENST00000494016 LMBRD1Q9NUN5 540 aa7.18□□□□□ -1.26
CPSF7-213ENST00000494016 ZFATQ9P243 1243 aa7.18□□□□□ -1.26
CPSF7-213ENST00000494016 RBM8AQ9Y5S9 174 aaKnown RBP7.18□□□□□ -1.26
CPSF7-213ENST00000494016 CDHR2Q9BYE9 1310 aa7.18□□□□□ -1.26
CPSF7-213ENST00000494016 MED23Q9ULK4 1368 aa7.18□□□□□ -1.26
CPSF7-213ENST00000494016 KAT6BQ8WYB5 2073 aa7.18□□□□□ -1.26
CPSF7-213ENST00000494016 ELOA3CA0A087WX78 387 aaPredicted RBP7.17□□□□□ -1.26
CPSF7-213ENST00000494016 FSD2A1L4K1 749 aa7.17□□□□□ -1.26
CPSF7-213ENST00000494016 ELOA3DA6NLF2 546 aaPredicted RBP7.17□□□□□ -1.26
CPSF7-213ENST00000494016 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.17□□□□□ -1.26
CPSF7-213ENST00000494016 SLC27A2O14975 620 aa7.17□□□□□ -1.26
CPSF7-213ENST00000494016 SASH3O75995 380 aa7.17□□□□□ -1.26
CPSF7-213ENST00000494016 PDGFAP04085 211 aa7.17□□□□□ -1.26
CPSF7-213ENST00000494016 TARSP26639 723 aaKnown RBP7.17□□□□□ -1.26
CPSF7-213ENST00000494016 IL6STP40189 918 aaPredicted RBP7.17□□□□□ -1.26
CPSF7-213ENST00000494016 AK2P54819 239 aa7.17□□□□□ -1.26
CPSF7-213ENST00000494016 COL9A3Q14050 684 aaPredicted RBP7.17□□□□□ -1.26
CPSF7-213ENST00000494016 ELOA3BQ3SY89 546 aa7.17□□□□□ -1.26
CPSF7-213ENST00000494016 USPL1Q5W0Q7 1092 aa7.17□□□□□ -1.26
CPSF7-213ENST00000494016 ZNF589Q86UQ0 364 aaPredicted RBP7.17□□□□□ -1.26
CPSF7-213ENST00000494016 GLYCTKQ8IVS8 523 aa7.17□□□□□ -1.26
CPSF7-213ENST00000494016 ELOA3Q8NG57 546 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms