RNA–Protein interactions for RNA: ENST00000493815.5

PDLIM7-208, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,686 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-208ENST00000493815 FRMPD2Q68DX3 1309 aaPredicted RBP20.96■□□□□ 0.95
PDLIM7-208ENST00000493815 OSBPP22059 807 aa20.96■□□□□ 0.95
PDLIM7-208ENST00000493815 PABPC4Q13310 644 aaKnown RBP eCLIP20.96■□□□□ 0.952e-6■■■□□ 14.6
PDLIM7-208ENST00000493815 TMEM87BQ96K49 555 aa20.96■□□□□ 0.95
PDLIM7-208ENST00000493815 PARK7Q99497 189 aaKnown RBP20.96■□□□□ 0.95
PDLIM7-208ENST00000493815 ZSWIM6Q9HCJ5 1215 aa20.96■□□□□ 0.95
PDLIM7-208ENST00000493815 ZCCHC17Q9NP64 241 aaKnown RBP20.96■□□□□ 0.95
PDLIM7-208ENST00000493815 FLOT1O75955 427 aa20.95■□□□□ 0.94
PDLIM7-208ENST00000493815 HSPA1AP0DMV8 641 aaKnown RBP20.95■□□□□ 0.94
PDLIM7-208ENST00000493815 HSPA1BP0DMV9 641 aaKnown RBP20.95■□□□□ 0.94
PDLIM7-208ENST00000493815 PDHBP11177 359 aa20.95■□□□□ 0.94
PDLIM7-208ENST00000493815 BMP3P12645 472 aa20.95■□□□□ 0.94
PDLIM7-208ENST00000493815 ANAPC15P60006 121 aa20.95■□□□□ 0.94
PDLIM7-208ENST00000493815 CCDC96Q2M329 555 aa20.95■□□□□ 0.94
PDLIM7-208ENST00000493815 NFXL1Q6ZNB6 911 aa20.95■□□□□ 0.94
PDLIM7-208ENST00000493815 RUFY3Q7L099 469 aa20.95■□□□□ 0.94
PDLIM7-208ENST00000493815 SMCR8Q8TEV9 937 aaPredicted RBP20.95■□□□□ 0.94
PDLIM7-208ENST00000493815 GMCL1Q96IK5 515 aa20.95■□□□□ 0.94
PDLIM7-208ENST00000493815 MYL10Q9BUA6 226 aa20.95■□□□□ 0.94
PDLIM7-208ENST00000493815 ZFYVE28Q9HCC9 887 aa20.95■□□□□ 0.94
PDLIM7-208ENST00000493815 GOLGA8HP0CJ92 632 aa20.94■□□□□ 0.94
PDLIM7-208ENST00000493815 POTEEQ6S8J3 1075 aa20.94■□□□□ 0.94
PDLIM7-208ENST00000493815 Q6ZUG5 572 aa20.94■□□□□ 0.94
PDLIM7-208ENST00000493815 RAB11FIP4Q86YS3 637 aa20.94■□□□□ 0.94
PDLIM7-208ENST00000493815 UPF2Q9HAU5 1272 aaKnown RBP20.94■□□□□ 0.94
PDLIM7-208ENST00000493815 GPCPD1Q9NPB8 672 aa20.94■□□□□ 0.94
PDLIM7-208ENST00000493815 CPA4Q9UI42 421 aa20.94■□□□□ 0.94
PDLIM7-208ENST00000493815 PNMA3Q9UL41 463 aa20.94■□□□□ 0.94
PDLIM7-208ENST00000493815 CYP46A1Q9Y6A2 500 aa20.94■□□□□ 0.94
PDLIM7-208ENST00000493815 WDR19Q8NEZ3 1342 aa20.93■□□□□ 0.94
PDLIM7-208ENST00000493815 TMEM232C9JQI7 657 aa20.93■□□□□ 0.94
PDLIM7-208ENST00000493815 FOXN1O15353 648 aa20.93■□□□□ 0.94
PDLIM7-208ENST00000493815 HERVK_113P62684 666 aa20.93■□□□□ 0.94
PDLIM7-208ENST00000493815 FGD1P98174 961 aa20.93■□□□□ 0.94
PDLIM7-208ENST00000493815 TTBK2Q6IQ55 1244 aa20.93■□□□□ 0.94
PDLIM7-208ENST00000493815 TM6SF1Q9BZW5 370 aa20.93■□□□□ 0.94
PDLIM7-208ENST00000493815 SAGE1Q9NXZ1 904 aa20.93■□□□□ 0.94
PDLIM7-208ENST00000493815 TLR2O60603 784 aa20.93■□□□□ 0.94
PDLIM7-208ENST00000493815 ECM2O94769 699 aaPredicted RBP20.93■□□□□ 0.94
PDLIM7-208ENST00000493815 COG2Q14746 738 aa20.93■□□□□ 0.94
PDLIM7-208ENST00000493815 DCAF4Q8WV16 495 aa20.93■□□□□ 0.94
PDLIM7-208ENST00000493815 LARP6Q9BRS8 491 aaKnown RBP20.93■□□□□ 0.94
PDLIM7-208ENST00000493815 MTA3Q9BTC8 594 aa20.93■□□□□ 0.94
PDLIM7-208ENST00000493815 CCDC69A6NI79 296 aa20.92■□□□□ 0.94
PDLIM7-208ENST00000493815 SPDYE16A6NNV3 312 aaPredicted RBP20.92■□□□□ 0.94
PDLIM7-208ENST00000493815 RXRAP19793 462 aa20.92■□□□□ 0.94
PDLIM7-208ENST00000493815 SLC16A2P36021 539 aa20.92■□□□□ 0.94
PDLIM7-208ENST00000493815 LIFRP42702 1097 aa20.92■□□□□ 0.94
PDLIM7-208ENST00000493815 IKQ13123 557 aaPredicted RBP20.92■□□□□ 0.94
PDLIM7-208ENST00000493815 ANKRD13CQ8N6S4 541 aa20.92■□□□□ 0.94
PDLIM7-208ENST00000493815 NUP133Q8WUM0 1156 aa20.92■□□□□ 0.94
PDLIM7-208ENST00000493815 KIF2CQ99661 725 aa20.92■□□□□ 0.94
PDLIM7-208ENST00000493815 CPVLQ9H3G5 476 aa20.92■□□□□ 0.94
PDLIM7-208ENST00000493815 BRPF3Q9ULD4 1205 aa20.92■□□□□ 0.94
PDLIM7-208ENST00000493815 ADGRA2Q96PE1 1338 aa20.91■□□□□ 0.94
PDLIM7-208ENST00000493815 SNHG28P0DPA3 235 aa20.91■□□□□ 0.94
PDLIM7-208ENST00000493815 RBM25P49756 843 aaKnown RBP20.91■□□□□ 0.94
PDLIM7-208ENST00000493815 ZNF543Q08ER8 600 aa20.91■□□□□ 0.94
PDLIM7-208ENST00000493815 CATIPQ7Z7H3 387 aa20.91■□□□□ 0.94
PDLIM7-208ENST00000493815 ZNF654Q8IZM8 581 aa20.91■□□□□ 0.94
PDLIM7-208ENST00000493815 BRF1Q92994 677 aa20.91■□□□□ 0.94
PDLIM7-208ENST00000493815 KIFC2Q96AC6 838 aa20.91■□□□□ 0.94
PDLIM7-208ENST00000493815 ATG4CQ96DT6 458 aa20.91■□□□□ 0.94
PDLIM7-208ENST00000493815 IL17RAQ96F46 866 aa20.91■□□□□ 0.94
PDLIM7-208ENST00000493815 TXNRD2Q9NNW7 524 aa20.91■□□□□ 0.94
PDLIM7-208ENST00000493815 DSG3P32926 999 aa20.9■□□□□ 0.94
PDLIM7-208ENST00000493815 APOBRQ0VD83 1088 aa20.9■□□□□ 0.94
PDLIM7-208ENST00000493815 TROAPQ12815 778 aa20.9■□□□□ 0.94
PDLIM7-208ENST00000493815 CCDC144CPQ8IYA2 1237 aa20.9■□□□□ 0.94
PDLIM7-208ENST00000493815 TMTC2Q8N394 836 aa20.9■□□□□ 0.94
PDLIM7-208ENST00000493815 STAG2Q8N3U4 1231 aa20.9■□□□□ 0.94
PDLIM7-208ENST00000493815 SLF1Q9BQI6 1058 aa20.9■□□□□ 0.94
PDLIM7-208ENST00000493815 PAGR1Q9BTK6 254 aa20.9■□□□□ 0.94
PDLIM7-208ENST00000493815 PDRG1Q9NUG6 133 aa20.9■□□□□ 0.94
PDLIM7-208ENST00000493815 PPP1R9AQ9ULJ8 1098 aa20.9■□□□□ 0.94
PDLIM7-208ENST00000493815 SLC12A7Q9Y666 1083 aa20.9■□□□□ 0.94
PDLIM7-208ENST00000493815 C17orf99Q6UX52 265 aa20.89■□□□□ 0.94
PDLIM7-208ENST00000493815 SGMS1Q86VZ5 419 aa20.89■□□□□ 0.94
PDLIM7-208ENST00000493815 CFHR5Q9BXR6 569 aa20.89■□□□□ 0.94
PDLIM7-208ENST00000493815 HOXC10Q9NYD6 342 aa20.89■□□□□ 0.94
PDLIM7-208ENST00000493815 RBPJLQ9UBG7 517 aa20.89■□□□□ 0.94
PDLIM7-208ENST00000493815 FEM1BQ9UK73 627 aa20.89■□□□□ 0.94
PDLIM7-208ENST00000493815 NAP1L2Q9ULW6 460 aaPredicted RBP20.89■□□□□ 0.94
PDLIM7-208ENST00000493815 PARP1P09874 1014 aaKnown RBP20.89■□□□□ 0.93
PDLIM7-208ENST00000493815 STAT2P52630 851 aa20.89■□□□□ 0.93
PDLIM7-208ENST00000493815 SNAP25P60880 206 aa20.89■□□□□ 0.93
PDLIM7-208ENST00000493815 TOB2Q14106 344 aaPredicted RBP20.89■□□□□ 0.93
PDLIM7-208ENST00000493815 MICU3Q86XE3 530 aa20.89■□□□□ 0.93
PDLIM7-208ENST00000493815 TBC1D32Q96NH3 1257 aa20.89■□□□□ 0.93
PDLIM7-208ENST00000493815 UBA5Q9GZZ9 404 aa20.89■□□□□ 0.93
PDLIM7-208ENST00000493815 KLF18A0A0U1RQI7 1052 aa20.88■□□□□ 0.93
PDLIM7-208ENST00000493815 GPR25O00155 361 aa20.88■□□□□ 0.93
PDLIM7-208ENST00000493815 NEK4P51957 841 aa20.88■□□□□ 0.93
PDLIM7-208ENST00000493815 APOA5Q6Q788 366 aa20.88■□□□□ 0.93
PDLIM7-208ENST00000493815 BTBD7Q9P203 1132 aa20.88■□□□□ 0.93
PDLIM7-208ENST00000493815 MAD2L2Q9UI95 211 aa20.88■□□□□ 0.93
PDLIM7-208ENST00000493815 VWA5AO00534 786 aa20.87■□□□□ 0.93
PDLIM7-208ENST00000493815 CNMDO75829 334 aa20.87■□□□□ 0.93
PDLIM7-208ENST00000493815 HSPA8P11142 646 aaKnown RBP20.87■□□□□ 0.93
PDLIM7-208ENST00000493815 BCRP11274 1271 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms