RNA–Protein interactions for RNA: ENST00000493669.2

PHACTR4-204, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 3,078 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-204ENST00000493669 STXBP3O00186 592 aa12.31□□□□□ -0.44
PHACTR4-204ENST00000493669 BIN1O00499 593 aa12.31□□□□□ -0.44
PHACTR4-204ENST00000493669 CYTH3O43739 400 aa12.31□□□□□ -0.44
PHACTR4-204ENST00000493669 GRIPAP1Q4V328 841 aa12.31□□□□□ -0.44
PHACTR4-204ENST00000493669 CT47A1Q5JQC4 288 aaPredicted RBP12.31□□□□□ -0.44
PHACTR4-204ENST00000493669 WWC2Q6AWC2 1192 aa12.31□□□□□ -0.44
PHACTR4-204ENST00000493669 CDC42EP5Q6NZY7 148 aa12.31□□□□□ -0.44
PHACTR4-204ENST00000493669 MTMR4Q9NYA4 1195 aa12.31□□□□□ -0.44
PHACTR4-204ENST00000493669 A0A087WWV3 80 aa12.31□□□□□ -0.44
PHACTR4-204ENST00000493669 SARSP49591 514 aaKnown RBP12.31□□□□□ -0.44
PHACTR4-204ENST00000493669 PTGDRQ13258 359 aa12.31□□□□□ -0.44
PHACTR4-204ENST00000493669 ZNF174Q15697 407 aa12.31□□□□□ -0.44
PHACTR4-204ENST00000493669 SLC35G1Q2M3R5 365 aa12.31□□□□□ -0.44
PHACTR4-204ENST00000493669 ASPRV1Q53RT3 343 aa12.31□□□□□ -0.44
PHACTR4-204ENST00000493669 APOBEC3HQ6NTF7 200 aaKnown RBP12.31□□□□□ -0.44
PHACTR4-204ENST00000493669 SUPT20HQ8NEM7 779 aa12.31□□□□□ -0.44
PHACTR4-204ENST00000493669 RRP36Q96EU6 259 aaKnown RBP12.31□□□□□ -0.44
PHACTR4-204ENST00000493669 KCNF1Q9H3M0 494 aa12.31□□□□□ -0.44
PHACTR4-204ENST00000493669 DDX4Q9NQI0 724 aaKnown RBP12.31□□□□□ -0.44
PHACTR4-204ENST00000493669 SERTAD1Q9UHV2 236 aa12.31□□□□□ -0.44
PHACTR4-204ENST00000493669 MYH8P13535 1937 aa12.31□□□□□ -0.44
PHACTR4-204ENST00000493669 F8W031 263 aaPredicted RBP12.31□□□□□ -0.44
PHACTR4-204ENST00000493669 SLFN14P0C7P3 912 aa12.31□□□□□ -0.44
PHACTR4-204ENST00000493669 CRKP46108 304 aa12.31□□□□□ -0.44
PHACTR4-204ENST00000493669 MYL5Q02045 173 aa12.31□□□□□ -0.44
PHACTR4-204ENST00000493669 PICALMQ13492 652 aa12.31□□□□□ -0.44
PHACTR4-204ENST00000493669 NCAPHQ15003 741 aa12.31□□□□□ -0.44
PHACTR4-204ENST00000493669 SPECC1Q5M775 1068 aa12.31□□□□□ -0.44
PHACTR4-204ENST00000493669 CCDC186Q7Z3E2 898 aa12.31□□□□□ -0.44
PHACTR4-204ENST00000493669 MLKLQ8NB16 471 aa12.31□□□□□ -0.44
PHACTR4-204ENST00000493669 SPATA20Q8TB22 786 aa12.31□□□□□ -0.44
PHACTR4-204ENST00000493669 KIAA1524Q8TCG1 905 aa12.31□□□□□ -0.44
PHACTR4-204ENST00000493669 SMARCE1Q969G3 411 aa12.31□□□□□ -0.44
PHACTR4-204ENST00000493669 ZNF830Q96NB3 372 aaPredicted RBP12.31□□□□□ -0.44
PHACTR4-204ENST00000493669 ZMYND12Q9H0C1 365 aa12.31□□□□□ -0.44
PHACTR4-204ENST00000493669 ZNF646O15015 1829 aaPredicted RBP12.3□□□□□ -0.44
PHACTR4-204ENST00000493669 CCDC194A0A1B0GVG4 234 aa12.3□□□□□ -0.44
PHACTR4-204ENST00000493669 SMC2O95347 1197 aa12.3□□□□□ -0.44
PHACTR4-204ENST00000493669 PTGS1P23219 599 aa12.3□□□□□ -0.44
PHACTR4-204ENST00000493669 GPKOWQ92917 476 aaPredicted RBP eCLIP12.3□□□□□ -0.44
PHACTR4-204ENST00000493669 CCDC17Q96LX7 622 aa12.3□□□□□ -0.44
PHACTR4-204ENST00000493669 CAMKK2Q96RR4 588 aa12.3□□□□□ -0.44
PHACTR4-204ENST00000493669 DHX36Q9H2U1 1008 aaKnown RBP12.3□□□□□ -0.44
PHACTR4-204ENST00000493669 IMPACTQ9P2X3 320 aa12.3□□□□□ -0.44
PHACTR4-204ENST00000493669 SEC63Q9UGP8 760 aaKnown RBP12.3□□□□□ -0.44
PHACTR4-204ENST00000493669 GREB1LQ9C091 1923 aaPredicted RBP12.3□□□□□ -0.44
PHACTR4-204ENST00000493669 SLX4Q8IY92 1834 aa12.3□□□□□ -0.44
PHACTR4-204ENST00000493669 ESYT2A0FGR8 921 aa12.3□□□□□ -0.44
PHACTR4-204ENST00000493669 LAD1O00515 517 aa12.3□□□□□ -0.44
PHACTR4-204ENST00000493669 SNHG28P0DPA3 235 aa12.3□□□□□ -0.44
PHACTR4-204ENST00000493669 VEGFAP15692 232 aaPredicted RBP12.3□□□□□ -0.44
PHACTR4-204ENST00000493669 LONP1P36776 959 aaKnown RBP12.3□□□□□ -0.44
PHACTR4-204ENST00000493669 NOLC1Q14978 699 aaKnown RBP eCLIP12.3□□□□□ -0.44
PHACTR4-204ENST00000493669 DACT2Q5SW24 774 aa12.3□□□□□ -0.44
PHACTR4-204ENST00000493669 HEATR3Q7Z4Q2 680 aa12.3□□□□□ -0.44
PHACTR4-204ENST00000493669 SH3RF1Q7Z6J0 888 aa12.3□□□□□ -0.44
PHACTR4-204ENST00000493669 FOXP4Q8IVH2 680 aaPredicted RBP12.3□□□□□ -0.44
PHACTR4-204ENST00000493669 SYMPKQ92797 1274 aaKnown RBP12.3□□□□□ -0.44
PHACTR4-204ENST00000493669 BAZ2BQ9UIF8 2168 aaKnown RBP12.29□□□□□ -0.44
PHACTR4-204ENST00000493669 GNA11P29992 359 aa12.29□□□□□ -0.44
PHACTR4-204ENST00000493669 ORC2Q13416 577 aaPredicted RBP12.29□□□□□ -0.44
PHACTR4-204ENST00000493669 KRT25Q7Z3Z0 450 aa12.29□□□□□ -0.44
PHACTR4-204ENST00000493669 C7orf43Q8WVR3 580 aa12.29□□□□□ -0.44
PHACTR4-204ENST00000493669 IDI2Q9BXS1 227 aa12.29□□□□□ -0.44
PHACTR4-204ENST00000493669 RIOX1Q9H6W3 641 aa12.29□□□□□ -0.44
PHACTR4-204ENST00000493669 DBNDD1Q9H9R9 158 aa12.29□□□□□ -0.44
PHACTR4-204ENST00000493669 PCDHA6Q9UN73 950 aa12.29□□□□□ -0.44
PHACTR4-204ENST00000493669 PCDHA8Q9Y5H6 950 aa12.29□□□□□ -0.44
PHACTR4-204ENST00000493669 WNT7AO00755 349 aa12.29□□□□□ -0.44
PHACTR4-204ENST00000493669 ECE2O60344 883 aa12.29□□□□□ -0.44
PHACTR4-204ENST00000493669 TTLL1O95922 423 aa12.29□□□□□ -0.44
PHACTR4-204ENST00000493669 PDHBP11177 359 aa12.29□□□□□ -0.44
PHACTR4-204ENST00000493669 SCNN1DP51172 638 aa12.29□□□□□ -0.44
PHACTR4-204ENST00000493669 GSDMDP57764 484 aa12.29□□□□□ -0.44
PHACTR4-204ENST00000493669 MORC3Q14149 939 aa12.29□□□□□ -0.44
PHACTR4-204ENST00000493669 NOM1Q5C9Z4 860 aaKnown RBP12.29□□□□□ -0.44
PHACTR4-204ENST00000493669 TYW1BQ6NUM6 668 aa12.29□□□□□ -0.44
PHACTR4-204ENST00000493669 ANO8Q9HCE9 1232 aaPredicted RBP12.29□□□□□ -0.44
PHACTR4-204ENST00000493669 C6orf50Q9HD87 102 aa12.29□□□□□ -0.44
PHACTR4-204ENST00000493669 SERPINA10Q9UK55 444 aa12.29□□□□□ -0.44
PHACTR4-204ENST00000493669 MAN1B1Q9UKM7 699 aa12.29□□□□□ -0.44
PHACTR4-204ENST00000493669 AKR1B1P15121 316 aa12.29□□□□□ -0.44
PHACTR4-204ENST00000493669 SHMT1P34896 483 aa12.28□□□□□ -0.44
PHACTR4-204ENST00000493669 PRPHP41219 470 aa12.28□□□□□ -0.44
PHACTR4-204ENST00000493669 USP49Q70CQ1 688 aa12.28□□□□□ -0.44
PHACTR4-204ENST00000493669 C4orf32Q8N8J7 132 aa12.28□□□□□ -0.44
PHACTR4-204ENST00000493669 IQUBQ8NA54 791 aa12.28□□□□□ -0.44
PHACTR4-204ENST00000493669 MXD3Q9BW11 206 aa12.28□□□□□ -0.44
PHACTR4-204ENST00000493669 ADAMTSL1Q8N6G6 1762 aa12.28□□□□□ -0.44
PHACTR4-204ENST00000493669 VWA3AA6NCI4 1184 aa12.28□□□□□ -0.44
PHACTR4-204ENST00000493669 CBFA2T2O43439 604 aa12.28□□□□□ -0.44
PHACTR4-204ENST00000493669 GOLGA8HP0CJ92 632 aa12.28□□□□□ -0.44
PHACTR4-204ENST00000493669 MCM7P33993 719 aa12.28□□□□□ -0.44
PHACTR4-204ENST00000493669 TXLNAP40222 546 aa12.28□□□□□ -0.44
PHACTR4-204ENST00000493669 NAPAP54920 295 aa12.28□□□□□ -0.44
PHACTR4-204ENST00000493669 SOGA3Q5TF21 947 aa12.28□□□□□ -0.44
PHACTR4-204ENST00000493669 PPP1R18Q6NYC8 613 aa12.28□□□□□ -0.44
PHACTR4-204ENST00000493669 USP17L2Q6R6M4 530 aa12.28□□□□□ -0.44
PHACTR4-204ENST00000493669 DHX58Q96C10 678 aa12.28□□□□□ -0.44
PHACTR4-204ENST00000493669 EPSTI1Q96J88 318 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms