RNA–Protein interactions for RNA: ENST00000493647.1

RHBDF1-211, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 3

Gene RHBDF1, Length 935 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-211ENST00000493647 MYL10Q9BUA6 226 aa14.19□□□□□ -0.14
RHBDF1-211ENST00000493647 ASCC2Q9H1I8 757 aaPredicted RBP14.19□□□□□ -0.14
RHBDF1-211ENST00000493647 PDRG1Q9NUG6 133 aa14.19□□□□□ -0.14
RHBDF1-211ENST00000493647 FBXO28Q9NVF7 368 aa14.19□□□□□ -0.14
RHBDF1-211ENST00000493647 RNF186Q9NXI6 227 aa14.19□□□□□ -0.14
RHBDF1-211ENST00000493647 SLC45A1Q9Y2W3 748 aa14.19□□□□□ -0.14
RHBDF1-211ENST00000493647 FRMPD2Q68DX3 1309 aaPredicted RBP14.18□□□□□ -0.14
RHBDF1-211ENST00000493647 ADGRA2Q96PE1 1338 aa14.18□□□□□ -0.14
RHBDF1-211ENST00000493647 MYH4Q9Y623 1939 aa14.18□□□□□ -0.14
RHBDF1-211ENST00000493647 BMP3P12645 472 aa14.18□□□□□ -0.14
RHBDF1-211ENST00000493647 SLC1A4P43007 532 aa14.18□□□□□ -0.14
RHBDF1-211ENST00000493647 ZNF543Q08ER8 600 aa14.18□□□□□ -0.14
RHBDF1-211ENST00000493647 APOBRQ0VD83 1088 aa14.18□□□□□ -0.14
RHBDF1-211ENST00000493647 TROAPQ12815 778 aa14.18□□□□□ -0.14
RHBDF1-211ENST00000493647 TTBK2Q6IQ55 1244 aa14.18□□□□□ -0.14
RHBDF1-211ENST00000493647 ZNF654Q8IZM8 581 aa14.18□□□□□ -0.14
RHBDF1-211ENST00000493647 DCAF4Q8WV16 495 aa14.18□□□□□ -0.14
RHBDF1-211ENST00000493647 BRF1Q92994 677 aa14.18□□□□□ -0.14
RHBDF1-211ENST00000493647 P2RX7Q99572 595 aaKnown RBP14.18□□□□□ -0.14
RHBDF1-211ENST00000493647 TANGO6Q9C0B7 1094 aa14.18□□□□□ -0.14
RHBDF1-211ENST00000493647 ZCCHC17Q9NP64 241 aaKnown RBP14.18□□□□□ -0.14
RHBDF1-211ENST00000493647 WBP1LQ9NX94 342 aa14.18□□□□□ -0.14
RHBDF1-211ENST00000493647 CCDC69A6NI79 296 aa14.17□□□□□ -0.14
RHBDF1-211ENST00000493647 PEX10O60683 326 aa14.17□□□□□ -0.14
RHBDF1-211ENST00000493647 GOLGA8HP0CJ92 632 aa14.17□□□□□ -0.14
RHBDF1-211ENST00000493647 RXRAP19793 462 aa14.17□□□□□ -0.14
RHBDF1-211ENST00000493647 CRHR2Q13324 411 aa14.17□□□□□ -0.14
RHBDF1-211ENST00000493647 GRM4Q14833 912 aa14.17□□□□□ -0.14
RHBDF1-211ENST00000493647 TAF1CQ15572 869 aaPredicted RBP14.17□□□□□ -0.14
RHBDF1-211ENST00000493647 CCDC96Q2M329 555 aa14.17□□□□□ -0.14
RHBDF1-211ENST00000493647 SLC35G1Q2M3R5 365 aa14.17□□□□□ -0.14
RHBDF1-211ENST00000493647 APOA5Q6Q788 366 aa14.17□□□□□ -0.14
RHBDF1-211ENST00000493647 NFXL1Q6ZNB6 911 aa14.17□□□□□ -0.14
RHBDF1-211ENST00000493647 TMTC2Q8N394 836 aa14.17□□□□□ -0.14
RHBDF1-211ENST00000493647 STAG2Q8N3U4 1231 aa14.17□□□□□ -0.14
RHBDF1-211ENST00000493647 LARP6Q9BRS8 491 aaKnown RBP14.17□□□□□ -0.14
RHBDF1-211ENST00000493647 GPCPD1Q9NPB8 672 aa14.17□□□□□ -0.14
RHBDF1-211ENST00000493647 KLF18A0A0U1RQI7 1052 aa14.16□□□□□ -0.14
RHBDF1-211ENST00000493647 SPDYE16A6NNV3 312 aaPredicted RBP14.16□□□□□ -0.14
RHBDF1-211ENST00000493647 TMEM232C9JQI7 657 aa14.16□□□□□ -0.14
RHBDF1-211ENST00000493647 CA12O43570 354 aa14.16□□□□□ -0.14
RHBDF1-211ENST00000493647 TRPA1O75762 1119 aa14.16□□□□□ -0.14
RHBDF1-211ENST00000493647 FLOT1O75955 427 aa14.16□□□□□ -0.14
RHBDF1-211ENST00000493647 DDAH1O94760 285 aa14.16□□□□□ -0.14
RHBDF1-211ENST00000493647 TBC1D8O95759 1140 aa14.16□□□□□ -0.14
RHBDF1-211ENST00000493647 DSG3P32926 999 aa14.16□□□□□ -0.14
RHBDF1-211ENST00000493647 NEK4P51957 841 aa14.16□□□□□ -0.14
RHBDF1-211ENST00000493647 AK2P54819 239 aa14.16□□□□□ -0.14
RHBDF1-211ENST00000493647 IRX3P78415 501 aaPredicted RBP14.16□□□□□ -0.14
RHBDF1-211ENST00000493647 MAP2K1Q02750 393 aaPredicted RBP14.16□□□□□ -0.14
RHBDF1-211ENST00000493647 PABPC4Q13310 644 aaKnown RBP eCLIP14.16□□□□□ -0.14
RHBDF1-211ENST00000493647 OTUD7BQ6GQQ9 843 aa14.16□□□□□ -0.14
RHBDF1-211ENST00000493647 CATIPQ7Z7H3 387 aa14.16□□□□□ -0.14
RHBDF1-211ENST00000493647 ATG4CQ96DT6 458 aa14.16□□□□□ -0.14
RHBDF1-211ENST00000493647 PARK7Q99497 189 aaKnown RBP14.16□□□□□ -0.14
RHBDF1-211ENST00000493647 ALDH8A1Q9H2A2 487 aaPredicted RBP14.16□□□□□ -0.14
RHBDF1-211ENST00000493647 CPVLQ9H3G5 476 aa14.16□□□□□ -0.14
RHBDF1-211ENST00000493647 MAD2L2Q9UI95 211 aa14.16□□□□□ -0.14
RHBDF1-211ENST00000493647 HPS5Q9UPZ3 1129 aa14.16□□□□□ -0.14
RHBDF1-211ENST00000493647 PALM3A6NDB9 673 aaPredicted RBP14.15□□□□□ -0.14
RHBDF1-211ENST00000493647 CNMDO75829 334 aa14.15□□□□□ -0.14
RHBDF1-211ENST00000493647 ALDH1A1P00352 501 aa14.15□□□□□ -0.14
RHBDF1-211ENST00000493647 OSBPP22059 807 aa14.15□□□□□ -0.14
RHBDF1-211ENST00000493647 SLC16A2P36021 539 aa14.15□□□□□ -0.14
RHBDF1-211ENST00000493647 EVCP57679 992 aa14.15□□□□□ -0.14
RHBDF1-211ENST00000493647 HERVK_113P62684 666 aa14.15□□□□□ -0.14
RHBDF1-211ENST00000493647 FGD1P98174 961 aa14.15□□□□□ -0.14
RHBDF1-211ENST00000493647 CCDC144CPQ8IYA2 1237 aa14.15□□□□□ -0.14
RHBDF1-211ENST00000493647 NUP133Q8WUM0 1156 aa14.15□□□□□ -0.14
RHBDF1-211ENST00000493647 CFHR5Q9BXR6 569 aa14.15□□□□□ -0.14
RHBDF1-211ENST00000493647 FEM1BQ9UK73 627 aa14.15□□□□□ -0.14
RHBDF1-211ENST00000493647 PPP1R9AQ9ULJ8 1098 aa14.15□□□□□ -0.14
RHBDF1-211ENST00000493647 ISY1Q9ULR0 285 aaKnown RBP14.15□□□□□ -0.14
RHBDF1-211ENST00000493647 SLC12A7Q9Y666 1083 aa14.15□□□□□ -0.14
RHBDF1-211ENST00000493647 PLA2G6O60733 806 aa14.14□□□□□ -0.15
RHBDF1-211ENST00000493647 PARP1P09874 1014 aaKnown RBP14.14□□□□□ -0.15
RHBDF1-211ENST00000493647 COG2Q14746 738 aa14.14□□□□□ -0.15
RHBDF1-211ENST00000493647 RABEP1Q15276 862 aa14.14□□□□□ -0.15
RHBDF1-211ENST00000493647 ASPRV1Q53RT3 343 aa14.14□□□□□ -0.15
RHBDF1-211ENST00000493647 SAMD1Q6SPF0 538 aaPredicted RBP14.14□□□□□ -0.15
RHBDF1-211ENST00000493647 BTNL9Q6UXG8 535 aa14.14□□□□□ -0.15
RHBDF1-211ENST00000493647 LBX2Q6XYB7 198 aa14.14□□□□□ -0.15
RHBDF1-211ENST00000493647 NBPF11Q86T75 865 aa14.14□□□□□ -0.15
RHBDF1-211ENST00000493647 MICU3Q86XE3 530 aa14.14□□□□□ -0.15
RHBDF1-211ENST00000493647 REPS2Q8NFH8 660 aa14.14□□□□□ -0.15
RHBDF1-211ENST00000493647 KIFC2Q96AC6 838 aa14.14□□□□□ -0.15
RHBDF1-211ENST00000493647 SLF1Q9BQI6 1058 aa14.14□□□□□ -0.15
RHBDF1-211ENST00000493647 UBA5Q9GZZ9 404 aa14.14□□□□□ -0.15
RHBDF1-211ENST00000493647 ZFYVE28Q9HCC9 887 aa14.14□□□□□ -0.15
RHBDF1-211ENST00000493647 TXNRD2Q9NNW7 524 aa14.14□□□□□ -0.15
RHBDF1-211ENST00000493647 FAM217BQ9NTX9 383 aaPredicted RBP14.14□□□□□ -0.15
RHBDF1-211ENST00000493647 SAGE1Q9NXZ1 904 aa14.14□□□□□ -0.15
RHBDF1-211ENST00000493647 RBPJLQ9UBG7 517 aa14.14□□□□□ -0.15
RHBDF1-211ENST00000493647 CPA4Q9UI42 421 aa14.14□□□□□ -0.15
RHBDF1-211ENST00000493647 TSKSQ9UJT2 592 aa14.14□□□□□ -0.15
RHBDF1-211ENST00000493647 PNMA3Q9UL41 463 aa14.14□□□□□ -0.15
RHBDF1-211ENST00000493647 ADAMTS5Q9UNA0 930 aa14.14□□□□□ -0.15
RHBDF1-211ENST00000493647 RLFQ13129 1914 aa14.13□□□□□ -0.15
RHBDF1-211ENST00000493647 CEP350Q5VT06 3117 aa14.13□□□□□ -0.15
RHBDF1-211ENST00000493647 GOLGA8BA8MQT2 603 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms