RNA–Protein interactions for RNA: ENST00000493621.1

SAMM50-205, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 283 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-205ENST00000493621 SNX17Q15036 470 aa14.87□□□□□ -0.03
SAMM50-205ENST00000493621 C9orf50Q5SZB4 431 aa14.87□□□□□ -0.03
SAMM50-205ENST00000493621 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.87□□□□□ -0.03
SAMM50-205ENST00000493621 CCDC17Q96LX7 622 aa14.87□□□□□ -0.03
SAMM50-205ENST00000493621 BOLA2Q9H3K6 86 aa14.87□□□□□ -0.03
SAMM50-205ENST00000493621 PDLIM7Q9NR12 457 aa14.87□□□□□ -0.03
SAMM50-205ENST00000493621 ATP8A2Q9NTI2 1148 aa14.87□□□□□ -0.03
SAMM50-205ENST00000493621 PAG1Q9NWQ8 432 aa14.87□□□□□ -0.03
SAMM50-205ENST00000493621 USP17L12C9JPN9 530 aa14.86□□□□□ -0.03
SAMM50-205ENST00000493621 USP17L21D6R901 530 aa14.86□□□□□ -0.03
SAMM50-205ENST00000493621 SLC25A27O95847 323 aa14.86□□□□□ -0.03
SAMM50-205ENST00000493621 EEF2P13639 858 aaKnown RBP14.86□□□□□ -0.03
SAMM50-205ENST00000493621 C12orf60Q5U649 245 aa14.86□□□□□ -0.03
SAMM50-205ENST00000493621 SH3RF1Q7Z6J0 888 aa14.86□□□□□ -0.03
SAMM50-205ENST00000493621 RPAP2Q8IXW5 612 aaPredicted RBP14.86□□□□□ -0.03
SAMM50-205ENST00000493621 AMOTL1Q8IY63 956 aa14.86□□□□□ -0.03
SAMM50-205ENST00000493621 MMP19Q99542 508 aa14.86□□□□□ -0.03
SAMM50-205ENST00000493621 COL25A1Q9BXS0 654 aaPredicted RBP14.86□□□□□ -0.03
SAMM50-205ENST00000493621 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.86□□□□□ -0.03
SAMM50-205ENST00000493621 FBXO28Q9NVF7 368 aa14.86□□□□□ -0.03
SAMM50-205ENST00000493621 TRIM43BA6NCK2 446 aa14.85□□□□□ -0.03
SAMM50-205ENST00000493621 HMMRO75330 724 aa14.85□□□□□ -0.03
SAMM50-205ENST00000493621 CHGBP05060 677 aa14.85□□□□□ -0.03
SAMM50-205ENST00000493621 PGK2P07205 417 aa14.85□□□□□ -0.03
SAMM50-205ENST00000493621 C16orf86Q6ZW13 317 aa14.85□□□□□ -0.03
SAMM50-205ENST00000493621 SIRT2Q8IXJ6 389 aa14.85□□□□□ -0.03
SAMM50-205ENST00000493621 TRIM43Q96BQ3 446 aaPredicted RBP14.85□□□□□ -0.03
SAMM50-205ENST00000493621 XPNPEP3Q9NQH7 507 aa14.85□□□□□ -0.03
SAMM50-205ENST00000493621 RAD21O60216 631 aa14.84□□□□□ -0.03
SAMM50-205ENST00000493621 RAB11FIP3O75154 756 aa14.84□□□□□ -0.03
SAMM50-205ENST00000493621 RARBP10826 455 aa14.84□□□□□ -0.03
SAMM50-205ENST00000493621 ATP5JP18859 108 aa14.84□□□□□ -0.03
SAMM50-205ENST00000493621 TLE2Q04725 743 aa14.84□□□□□ -0.03
SAMM50-205ENST00000493621 C1orf53Q5VUE5 145 aa14.84□□□□□ -0.03
SAMM50-205ENST00000493621 RIOX2Q8IUF8 465 aa14.84□□□□□ -0.03
SAMM50-205ENST00000493621 DDRGK1Q96HY6 314 aa14.84□□□□□ -0.03
SAMM50-205ENST00000493621 CDX2Q99626 313 aaPredicted RBP14.84□□□□□ -0.03
SAMM50-205ENST00000493621 TINF2Q9BSI4 451 aa14.84□□□□□ -0.03
SAMM50-205ENST00000493621 SEMA6BQ9H3T3 888 aa14.84□□□□□ -0.03
SAMM50-205ENST00000493621 GOPCQ9HD26 462 aa14.84□□□□□ -0.03
SAMM50-205ENST00000493621 ADAMTS5Q9UNA0 930 aa14.84□□□□□ -0.03
SAMM50-205ENST00000493621 PHF24Q9UPV7 400 aa14.84□□□□□ -0.03
SAMM50-205ENST00000493621 SLC4A4Q9Y6R1 1079 aa14.84□□□□□ -0.03
SAMM50-205ENST00000493621 VWA5AO00534 786 aa14.83□□□□□ -0.04
SAMM50-205ENST00000493621 PGK1P00558 417 aa14.83□□□□□ -0.04
SAMM50-205ENST00000493621 MS4A1P11836 297 aa14.83□□□□□ -0.04
SAMM50-205ENST00000493621 TAL1P17542 331 aaPredicted RBP14.83□□□□□ -0.04
SAMM50-205ENST00000493621 STAT3P40763 770 aa14.83□□□□□ -0.04
SAMM50-205ENST00000493621 KCTD2Q14681 263 aa14.83□□□□□ -0.04
SAMM50-205ENST00000493621 ZNF792Q3KQV3 632 aa14.83□□□□□ -0.04
SAMM50-205ENST00000493621 FAM83BQ5T0W9 1011 aa14.83□□□□□ -0.04
SAMM50-205ENST00000493621 RNF180Q86T96 592 aa14.83□□□□□ -0.04
SAMM50-205ENST00000493621 HAUS7Q99871 368 aa14.83□□□□□ -0.04
SAMM50-205ENST00000493621 KANSL2Q9H9L4 492 aa14.83□□□□□ -0.04
SAMM50-205ENST00000493621 NRBP1Q9UHY1 535 aa14.83□□□□□ -0.04
SAMM50-205ENST00000493621 PPP1R9AQ9ULJ8 1098 aa14.83□□□□□ -0.04
SAMM50-205ENST00000493621 COG6Q9Y2V7 657 aa14.83□□□□□ -0.04
SAMM50-205ENST00000493621 GREB1LQ9C091 1923 aaPredicted RBP14.83□□□□□ -0.04
SAMM50-205ENST00000493621 MYH4Q9Y623 1939 aa14.82□□□□□ -0.04
SAMM50-205ENST00000493621 EYSQ5T1H1 3165 aa14.82□□□□□ -0.04
SAMM50-205ENST00000493621 CLTBP09497 229 aa14.82□□□□□ -0.04
SAMM50-205ENST00000493621 ITGB8P26012 769 aa14.82□□□□□ -0.04
SAMM50-205ENST00000493621 SMAD3P84022 425 aaKnown RBP14.82□□□□□ -0.04
SAMM50-205ENST00000493621 UBE3CQ15386 1083 aa14.82□□□□□ -0.04
SAMM50-205ENST00000493621 CTR9Q6PD62 1173 aa14.82□□□□□ -0.04
SAMM50-205ENST00000493621 LENG1Q96BZ8 264 aaPredicted RBP14.82□□□□□ -0.04
SAMM50-205ENST00000493621 ZBTB40Q9NUA8 1239 aa14.82□□□□□ -0.04
SAMM50-205ENST00000493621 ZNF214Q9UL59 606 aaPredicted RBP14.82□□□□□ -0.04
SAMM50-205ENST00000493621 DDX19BQ9UMR2 479 aa14.82□□□□□ -0.04
SAMM50-205ENST00000493621 DIS3Q9Y2L1 958 aaKnown RBP14.82□□□□□ -0.04
SAMM50-205ENST00000493621 TACC3Q9Y6A5 838 aa14.82□□□□□ -0.04
SAMM50-205ENST00000493621 A0A1W2PQ45 241 aaPredicted RBP14.81□□□□□ -0.04
SAMM50-205ENST00000493621 A0A1W2PQY0 241 aa14.81□□□□□ -0.04
SAMM50-205ENST00000493621 PQBP1O60828 265 aaKnown RBP14.81□□□□□ -0.04
SAMM50-205ENST00000493621 ZNF865P0CJ78 1059 aaPredicted RBP14.81□□□□□ -0.04
SAMM50-205ENST00000493621 AKR1A1P14550 325 aa14.81□□□□□ -0.04
SAMM50-205ENST00000493621 REPS2Q8NFH8 660 aa14.81□□□□□ -0.04
SAMM50-205ENST00000493621 MAFAQ8NHW3 353 aaPredicted RBP14.81□□□□□ -0.04
SAMM50-205ENST00000493621 MYLIPQ8WY64 445 aa14.81□□□□□ -0.04
SAMM50-205ENST00000493621 NUP88Q99567 741 aaPredicted RBP14.81□□□□□ -0.04
SAMM50-205ENST00000493621 PUS7LQ9H0K6 701 aaKnown RBP14.81□□□□□ -0.04
SAMM50-205ENST00000493621 TTYH1Q9H313 450 aaPredicted RBP14.81□□□□□ -0.04
SAMM50-205ENST00000493621 ZBED9Q6R2W3 1325 aa14.81□□□□□ -0.04
SAMM50-205ENST00000493621 MCM3APO60318 1980 aa14.8□□□□□ -0.04
SAMM50-205ENST00000493621 COPB2P35606 906 aa14.8□□□□□ -0.04
SAMM50-205ENST00000493621 EPHB4P54760 987 aa14.8□□□□□ -0.04
SAMM50-205ENST00000493621 ZSCAN25Q6NSZ9 544 aa14.8□□□□□ -0.04
SAMM50-205ENST00000493621 MIER1Q8N108 512 aa14.8□□□□□ -0.04
SAMM50-205ENST00000493621 STK11IPQ8N1F8 1099 aa14.8□□□□□ -0.04
SAMM50-205ENST00000493621 RNPC3Q96LT9 517 aaKnown RBP14.8□□□□□ -0.04
SAMM50-205ENST00000493621 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.8□□□□□ -0.04
SAMM50-205ENST00000493621 CNPY2Q9Y2B0 182 aa14.8□□□□□ -0.04
SAMM50-205ENST00000493621 ROBO3Q96MS0 1386 aa14.8□□□□□ -0.04
SAMM50-205ENST00000493621 KIAA0355O15063 1070 aa14.79□□□□□ -0.04
SAMM50-205ENST00000493621 RAG1P15918 1043 aa14.79□□□□□ -0.04
SAMM50-205ENST00000493621 SNRNP48Q6IEG0 339 aaKnown RBP14.79□□□□□ -0.04
SAMM50-205ENST00000493621 SLF1Q9BQI6 1058 aa14.79□□□□□ -0.04
SAMM50-205ENST00000493621 TMEM39AQ9NV64 488 aa14.79□□□□□ -0.04
SAMM50-205ENST00000493621 ARPP21Q9UBL0 812 aaPredicted RBP14.79□□□□□ -0.04
SAMM50-205ENST00000493621 PRUNE2Q8WUY3 3088 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms