RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 TEKT1Q969V4 418 aa7.66□□□□□ -1.18
VPS13B-205ENST00000493587 NUP58Q9BVL2 599 aa7.66□□□□□ -1.18
VPS13B-205ENST00000493587 OSBPL3Q9H4L5 887 aa7.66□□□□□ -1.18
VPS13B-205ENST00000493587 PIP4K2BP78356 416 aa7.65□□□□□ -1.18
VPS13B-205ENST00000493587 MYBPC3Q14896 1274 aa7.65□□□□□ -1.18
VPS13B-205ENST00000493587 NAA35Q5VZE5 725 aa7.65□□□□□ -1.18
VPS13B-205ENST00000493587 TSHZ3Q63HK5 1081 aa7.65□□□□□ -1.18
VPS13B-205ENST00000493587 GSPT2Q8IYD1 628 aaKnown RBP7.65□□□□□ -1.18
VPS13B-205ENST00000493587 XAGE2Q96GT9 111 aa7.65□□□□□ -1.18
VPS13B-205ENST00000493587 DCTPP1Q9H773 170 aa7.65□□□□□ -1.18
VPS13B-205ENST00000493587 RAB21Q9UL25 225 aa7.65□□□□□ -1.18
VPS13B-205ENST00000493587 AXIN2Q9Y2T1 843 aa7.65□□□□□ -1.18
VPS13B-205ENST00000493587 ADCY9O60503 1353 aa7.65□□□□□ -1.18
VPS13B-205ENST00000493587 JCADQ9P266 1359 aa7.65□□□□□ -1.18
VPS13B-205ENST00000493587 DLEC1Q9Y238 1755 aa7.65□□□□□ -1.18
VPS13B-205ENST00000493587 UTYO14607 1347 aa7.65□□□□□ -1.18
VPS13B-205ENST00000493587 H3BQV1 296 aa7.65□□□□□ -1.18
VPS13B-205ENST00000493587 H7C1W4 665 aa7.65□□□□□ -1.18
VPS13B-205ENST00000493587 EVI5O60447 810 aa7.65□□□□□ -1.18
VPS13B-205ENST00000493587 SUPT3HO75486 399 aa7.65□□□□□ -1.18
VPS13B-205ENST00000493587 PRPF6O94906 941 aaKnown RBP7.65□□□□□ -1.18
VPS13B-205ENST00000493587 ATP5JP18859 108 aa7.65□□□□□ -1.18
VPS13B-205ENST00000493587 FOSBP53539 338 aa7.65□□□□□ -1.18
VPS13B-205ENST00000493587 AK2P54819 239 aa7.65□□□□□ -1.18
VPS13B-205ENST00000493587 TUBB4BP68371 445 aa7.65□□□□□ -1.18
VPS13B-205ENST00000493587 DEUP1Q05D60 604 aa7.65□□□□□ -1.18
VPS13B-205ENST00000493587 KRT24Q2M2I5 525 aa7.65□□□□□ -1.18
VPS13B-205ENST00000493587 CCDC38Q502W7 563 aa7.65□□□□□ -1.18
VPS13B-205ENST00000493587 IFFO2Q5TF58 517 aa7.65□□□□□ -1.18
VPS13B-205ENST00000493587 MTHFD1LQ6UB35 978 aa7.65□□□□□ -1.18
VPS13B-205ENST00000493587 MAEAQ7L5Y9 396 aa7.65□□□□□ -1.18
VPS13B-205ENST00000493587 FAM228AQ86W67 206 aa7.65□□□□□ -1.18
VPS13B-205ENST00000493587 FTOQ9C0B1 505 aaKnown RBP eCLIP7.65□□□□□ -1.18
VPS13B-205ENST00000493587 TAOK3Q9H2K8 898 aa7.65□□□□□ -1.18
VPS13B-205ENST00000493587 USH1CQ9Y6N9 552 aa7.65□□□□□ -1.18
VPS13B-205ENST00000493587 COL5A2P05997 1499 aaPredicted RBP7.65□□□□□ -1.19
VPS13B-205ENST00000493587 A6NNZ2 444 aa7.65□□□□□ -1.19
VPS13B-205ENST00000493587 N4BP3O15049 544 aa7.65□□□□□ -1.19
VPS13B-205ENST00000493587 FANCGO15287 622 aa7.65□□□□□ -1.19
VPS13B-205ENST00000493587 SHOX2O60902 331 aaPredicted RBP7.65□□□□□ -1.19
VPS13B-205ENST00000493587 LINGO3P0C6S8 592 aa7.65□□□□□ -1.19
VPS13B-205ENST00000493587 ALDH1B1P30837 517 aa7.65□□□□□ -1.19
VPS13B-205ENST00000493587 KCNJ6P48051 423 aa7.65□□□□□ -1.19
VPS13B-205ENST00000493587 TUBB8Q3ZCM7 444 aa7.65□□□□□ -1.19
VPS13B-205ENST00000493587 SND1Q7KZF4 910 aaKnown RBP eCLIP7.65□□□□□ -1.19
VPS13B-205ENST00000493587 BRAPQ7Z569 592 aa7.65□□□□□ -1.19
VPS13B-205ENST00000493587 CCDC155Q8N6L0 562 aa7.65□□□□□ -1.19
VPS13B-205ENST00000493587 TMCO5AQ8N6Q1 288 aa7.65□□□□□ -1.19
VPS13B-205ENST00000493587 MSANTD4Q8NCY6 345 aa7.65□□□□□ -1.19
VPS13B-205ENST00000493587 ZNF473Q8WTR7 871 aaKnown RBP7.65□□□□□ -1.19
VPS13B-205ENST00000493587 CENPOQ9BU64 300 aa7.65□□□□□ -1.19
VPS13B-205ENST00000493587 UBE2OQ9C0C9 1292 aaKnown RBP7.65□□□□□ -1.19
VPS13B-205ENST00000493587 PREBQ9HCU5 417 aa7.65□□□□□ -1.19
VPS13B-205ENST00000493587 SCN7AQ01118 1682 aa7.64□□□□□ -1.19
VPS13B-205ENST00000493587 STXBP3O00186 592 aa7.64□□□□□ -1.19
VPS13B-205ENST00000493587 CBFA2T2O43439 604 aa7.64□□□□□ -1.19
VPS13B-205ENST00000493587 ATP6V1G2O95670 118 aa7.64□□□□□ -1.19
VPS13B-205ENST00000493587 MYL6BP14649 208 aa7.64□□□□□ -1.19
VPS13B-205ENST00000493587 ALOX15P16050 662 aaPredicted RBP7.64□□□□□ -1.19
VPS13B-205ENST00000493587 SEC24CP53992 1094 aa7.64□□□□□ -1.19
VPS13B-205ENST00000493587 RHBDL3P58872 404 aa7.64□□□□□ -1.19
VPS13B-205ENST00000493587 FOXD4Q12950 439 aaPredicted RBP7.64□□□□□ -1.19
VPS13B-205ENST00000493587 NECAB1Q8N987 351 aa7.64□□□□□ -1.19
VPS13B-205ENST00000493587 EHBP1Q8NDI1 1231 aa7.64□□□□□ -1.19
VPS13B-205ENST00000493587 DDX54Q8TDD1 881 aaKnown RBP7.64□□□□□ -1.19
VPS13B-205ENST00000493587 COG1Q8WTW3 980 aa7.64□□□□□ -1.19
VPS13B-205ENST00000493587 LEO1Q8WVC0 666 aaPredicted RBP7.64□□□□□ -1.19
VPS13B-205ENST00000493587 DDX17Q92841 729 aaKnown RBP7.64□□□□□ -1.19
VPS13B-205ENST00000493587 ESYT1Q9BSJ8 1104 aa7.64□□□□□ -1.19
VPS13B-205ENST00000493587 PIDD1Q9HB75 910 aa7.64□□□□□ -1.19
VPS13B-205ENST00000493587 ABCF2Q9UG63 623 aa7.64□□□□□ -1.19
VPS13B-205ENST00000493587 HSF2BPO75031 334 aa7.64□□□□□ -1.19
VPS13B-205ENST00000493587 TFRCP02786 760 aaKnown RBP7.64□□□□□ -1.19
VPS13B-205ENST00000493587 FAM200BP0CF97 657 aa7.64□□□□□ -1.19
VPS13B-205ENST00000493587 CPA1P15085 419 aa7.64□□□□□ -1.19
VPS13B-205ENST00000493587 PDCP20941 246 aa7.64□□□□□ -1.19
VPS13B-205ENST00000493587 CLCN2P51788 898 aa7.64□□□□□ -1.19
VPS13B-205ENST00000493587 HDLBPQ00341 1268 aaKnown RBP7.64□□□□□ -1.19
VPS13B-205ENST00000493587 G3BP1Q13283 466 aaKnown RBP eCLIP7.64□□□□□ -1.19
VPS13B-205ENST00000493587 HSP90AA4PQ58FG1 418 aa7.64□□□□□ -1.19
VPS13B-205ENST00000493587 ZNF365Q70YC5 407 aa7.64□□□□□ -1.19
VPS13B-205ENST00000493587 MCM10Q7L590 875 aa7.64□□□□□ -1.19
VPS13B-205ENST00000493587 CCAR1Q8IX12 1150 aaKnown RBP7.64□□□□□ -1.19
VPS13B-205ENST00000493587 SDR16C5Q8N3Y7 309 aa7.64□□□□□ -1.19
VPS13B-205ENST00000493587 GBP7Q8N8V2 638 aaPredicted RBP7.64□□□□□ -1.19
VPS13B-205ENST00000493587 CCDC63Q8NA47 563 aa7.64□□□□□ -1.19
VPS13B-205ENST00000493587 MAGEC3Q8TD91 643 aa7.64□□□□□ -1.19
VPS13B-205ENST00000493587 SNRNP27Q8WVK2 155 aaKnown RBP7.64□□□□□ -1.19
VPS13B-205ENST00000493587 OPTNQ96CV9 577 aa7.64□□□□□ -1.19
VPS13B-205ENST00000493587 DHRS1Q96LJ7 313 aa7.64□□□□□ -1.19
VPS13B-205ENST00000493587 VIPAS39Q9H9C1 493 aa7.64□□□□□ -1.19
VPS13B-205ENST00000493587 RABL2AQ9UBK7 228 aaPredicted RBP7.64□□□□□ -1.19
VPS13B-205ENST00000493587 THSD7AQ9UPZ6 1657 aa7.64□□□□□ -1.19
VPS13B-205ENST00000493587 C4AP0C0L4 1744 aa7.64□□□□□ -1.19
VPS13B-205ENST00000493587 C4BP0C0L5 1744 aa7.64□□□□□ -1.19
VPS13B-205ENST00000493587 CHD4Q14839 1912 aa7.64□□□□□ -1.19
VPS13B-205ENST00000493587 GOLGA6L10A0A0M3HER8 536 aa7.64□□□□□ -1.19
VPS13B-205ENST00000493587 GOLGA8KD6RF30 607 aa7.64□□□□□ -1.19
VPS13B-205ENST00000493587 TRIM21P19474 475 aaKnown RBP7.64□□□□□ -1.19
VPS13B-205ENST00000493587 ZC3H6P61129 1189 aaKnown RBP7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms