RNA–Protein interactions for RNA: ENST00000493553.1

PRPF3-206, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-206ENST00000493553 TM4SF1P30408 202 aa11.68□□□□□ -0.54
PRPF3-206ENST00000493553 KCNQ4P56696 695 aa11.68□□□□□ -0.54
PRPF3-206ENST00000493553 APOBRQ0VD83 1088 aa11.68□□□□□ -0.54
PRPF3-206ENST00000493553 SCRN1Q12765 414 aa11.68□□□□□ -0.54
PRPF3-206ENST00000493553 STK3Q13188 491 aa11.68□□□□□ -0.54
PRPF3-206ENST00000493553 ZSCAN23Q3MJ62 389 aa11.68□□□□□ -0.54
PRPF3-206ENST00000493553 CCDC178Q5BJE1 867 aa11.68□□□□□ -0.54
PRPF3-206ENST00000493553 CCDC183Q5T5S1 534 aa11.68□□□□□ -0.54
PRPF3-206ENST00000493553 PRICKLE2Q7Z3G6 844 aa11.68□□□□□ -0.54
PRPF3-206ENST00000493553 SGMS1Q86VZ5 419 aa11.68□□□□□ -0.54
PRPF3-206ENST00000493553 AMOTL1Q8IY63 956 aa11.68□□□□□ -0.54
PRPF3-206ENST00000493553 PLPP7Q8NBV4 271 aa11.68□□□□□ -0.54
PRPF3-206ENST00000493553 NSUN7Q8NE18 718 aaKnown RBP11.68□□□□□ -0.54
PRPF3-206ENST00000493553 FOXD4L4Q8WXT5 416 aaPredicted RBP11.68□□□□□ -0.54
PRPF3-206ENST00000493553 TCEANC2Q96MN5 208 aa11.68□□□□□ -0.54
PRPF3-206ENST00000493553 NOL10Q9BSC4 688 aaKnown RBP11.68□□□□□ -0.54
PRPF3-206ENST00000493553 ATP8A2Q9NTI2 1148 aa11.68□□□□□ -0.54
PRPF3-206ENST00000493553 ANKIB1Q9P2G1 1089 aa11.68□□□□□ -0.54
PRPF3-206ENST00000493553 KLF18A0A0U1RQI7 1052 aa11.67□□□□□ -0.54
PRPF3-206ENST00000493553 PTPDC1A2A3K4 754 aa11.67□□□□□ -0.54
PRPF3-206ENST00000493553 KLRG2A4D1S0 409 aaPredicted RBP11.67□□□□□ -0.54
PRPF3-206ENST00000493553 GOLGA8BA8MQT2 603 aa11.67□□□□□ -0.54
PRPF3-206ENST00000493553 CHGBP05060 677 aa11.67□□□□□ -0.54
PRPF3-206ENST00000493553 SERPINB2P05120 415 aa11.67□□□□□ -0.54
PRPF3-206ENST00000493553 GYG1P46976 350 aa11.67□□□□□ -0.54
PRPF3-206ENST00000493553 HAND2P61296 217 aa11.67□□□□□ -0.54
PRPF3-206ENST00000493553 ST3GAL1Q11201 340 aa11.67□□□□□ -0.54
PRPF3-206ENST00000493553 TXNRD1Q16881 649 aa11.67□□□□□ -0.54
PRPF3-206ENST00000493553 OXLD1Q5BKU9 147 aa11.67□□□□□ -0.54
PRPF3-206ENST00000493553 PRR5LQ6MZQ0 368 aa11.67□□□□□ -0.54
PRPF3-206ENST00000493553 BRAPQ7Z569 592 aa11.67□□□□□ -0.54
PRPF3-206ENST00000493553 TBC1D22AQ8WUA7 517 aa11.67□□□□□ -0.54
PRPF3-206ENST00000493553 ESR2Q92731 530 aa11.67□□□□□ -0.54
PRPF3-206ENST00000493553 ARMT1Q9H993 441 aa11.67□□□□□ -0.54
PRPF3-206ENST00000493553 LRRC4BQ9NT99 713 aa11.67□□□□□ -0.54
PRPF3-206ENST00000493553 NAP1L2Q9ULW6 460 aaPredicted RBP11.67□□□□□ -0.54
PRPF3-206ENST00000493553 SBF2Q86WG5 1849 aa11.67□□□□□ -0.54
PRPF3-206ENST00000493553 DUOX1Q9NRD9 1551 aa11.67□□□□□ -0.54
PRPF3-206ENST00000493553 TAF1LQ8IZX4 1826 aa11.66□□□□□ -0.54
PRPF3-206ENST00000493553 CCDC69A6NI79 296 aa11.66□□□□□ -0.54
PRPF3-206ENST00000493553 SH2B2O14492 632 aaPredicted RBP11.66□□□□□ -0.54
PRPF3-206ENST00000493553 TRIM37O94972 964 aa11.66□□□□□ -0.54
PRPF3-206ENST00000493553 BAG3O95817 575 aa11.66□□□□□ -0.54
PRPF3-206ENST00000493553 IL2RAP01589 272 aa11.66□□□□□ -0.54
PRPF3-206ENST00000493553 TMEM67Q5HYA8 995 aa11.66□□□□□ -0.54
PRPF3-206ENST00000493553 FAM182BQ5T319 152 aa11.66□□□□□ -0.54
PRPF3-206ENST00000493553 LRSAM1Q6UWE0 723 aa11.66□□□□□ -0.54
PRPF3-206ENST00000493553 NFXL1Q6ZNB6 911 aa11.66□□□□□ -0.54
PRPF3-206ENST00000493553 GPT2Q8TD30 523 aa11.66□□□□□ -0.54
PRPF3-206ENST00000493553 CNKSR1Q969H4 720 aa11.66□□□□□ -0.54
PRPF3-206ENST00000493553 SPATA32Q96LK8 384 aa11.66□□□□□ -0.54
PRPF3-206ENST00000493553 ZNF287Q9HBT7 754 aa11.66□□□□□ -0.54
PRPF3-206ENST00000493553 RAB6BQ9NRW1 208 aa11.66□□□□□ -0.54
PRPF3-206ENST00000493553 PODXL2Q9NZ53 605 aa11.66□□□□□ -0.54
PRPF3-206ENST00000493553 IFIT3O14879 490 aaKnown RBP11.65□□□□□ -0.54
PRPF3-206ENST00000493553 ZBTB43O43298 467 aa11.65□□□□□ -0.54
PRPF3-206ENST00000493553 CALM1P0DP23 149 aa11.65□□□□□ -0.54
PRPF3-206ENST00000493553 CALM2P0DP24 149 aa11.65□□□□□ -0.54
PRPF3-206ENST00000493553 CALM3P0DP25 149 aa11.65□□□□□ -0.54
PRPF3-206ENST00000493553 METAP2P50579 478 aaKnown RBP eCLIP11.65□□□□□ -0.54
PRPF3-206ENST00000493553 TRIM29Q14134 588 aa11.65□□□□□ -0.54
PRPF3-206ENST00000493553 WDR44Q5JSH3 913 aa11.65□□□□□ -0.54
PRPF3-206ENST00000493553 DZIP1Q86YF9 867 aaKnown RBP11.65□□□□□ -0.54
PRPF3-206ENST00000493553 UBAC1Q9BSL1 405 aa11.65□□□□□ -0.54
PRPF3-206ENST00000493553 TFCP2L1Q9NZI6 479 aa11.65□□□□□ -0.54
PRPF3-206ENST00000493553 ARPP21Q9UBL0 812 aaPredicted RBP11.65□□□□□ -0.54
PRPF3-206ENST00000493553 STK17AQ9UEE5 414 aa11.65□□□□□ -0.54
PRPF3-206ENST00000493553 GGA1Q9UJY5 639 aa11.65□□□□□ -0.54
PRPF3-206ENST00000493553 SUGT1Q9Y2Z0 365 aa11.65□□□□□ -0.54
PRPF3-206ENST00000493553 HRH3Q9Y5N1 445 aa11.65□□□□□ -0.54
PRPF3-206ENST00000493553 SLC12A7Q9Y666 1083 aa11.65□□□□□ -0.54
PRPF3-206ENST00000493553 DOCK2Q92608 1830 aa11.65□□□□□ -0.55
PRPF3-206ENST00000493553 STK36Q9NRP7 1315 aa11.64□□□□□ -0.55
PRPF3-206ENST00000493553 SPATA31C2B4DYI2 1134 aa11.64□□□□□ -0.55
PRPF3-206ENST00000493553 FIBPO43427 364 aa11.64□□□□□ -0.55
PRPF3-206ENST00000493553 ORC4O43929 436 aa11.64□□□□□ -0.55
PRPF3-206ENST00000493553 CAVIN2O95810 425 aa11.64□□□□□ -0.55
PRPF3-206ENST00000493553 LDHBP07195 334 aaKnown RBP11.64□□□□□ -0.55
PRPF3-206ENST00000493553 XRCC6P12956 609 aaKnown RBP eCLIP11.64□□□□□ -0.55
PRPF3-206ENST00000493553 RHOQP17081 205 aa11.64□□□□□ -0.55
PRPF3-206ENST00000493553 RXRBP28702 533 aa11.64□□□□□ -0.55
PRPF3-206ENST00000493553 ALDH1B1P30837 517 aa11.64□□□□□ -0.55
PRPF3-206ENST00000493553 PDE6BP35913 854 aa11.64□□□□□ -0.55
PRPF3-206ENST00000493553 ANTXR2P58335 489 aa11.64□□□□□ -0.55
PRPF3-206ENST00000493553 DNM1Q05193 864 aaKnown RBP11.64□□□□□ -0.55
PRPF3-206ENST00000493553 PPARAQ07869 468 aa11.64□□□□□ -0.55
PRPF3-206ENST00000493553 RESTQ13127 1097 aa11.64□□□□□ -0.55
PRPF3-206ENST00000493553 SBK1Q52WX2 424 aa11.64□□□□□ -0.55
PRPF3-206ENST00000493553 CDC37L1Q7L3B6 337 aa11.64□□□□□ -0.55
PRPF3-206ENST00000493553 IQCA1Q86XH1 822 aa11.64□□□□□ -0.55
PRPF3-206ENST00000493553 TBC1D10CQ8IV04 446 aa11.64□□□□□ -0.55
PRPF3-206ENST00000493553 TRIM22Q8IYM9 498 aa11.64□□□□□ -0.55
PRPF3-206ENST00000493553 LCORLQ8N3X6 602 aa11.64□□□□□ -0.55
PRPF3-206ENST00000493553 TDRD7Q8NHU6 1098 aaKnown RBP11.64□□□□□ -0.55
PRPF3-206ENST00000493553 NSUN4Q96CB9 384 aaKnown RBP11.64□□□□□ -0.55
PRPF3-206ENST00000493553 C8orf76Q96K31 380 aa11.64□□□□□ -0.55
PRPF3-206ENST00000493553 RIOK1Q9BRS2 568 aaKnown RBP11.64□□□□□ -0.55
PRPF3-206ENST00000493553 LRRC2Q9BYS8 371 aa11.64□□□□□ -0.55
PRPF3-206ENST00000493553 DDX19AQ9NUU7 478 aaKnown RBP11.64□□□□□ -0.55
PRPF3-206ENST00000493553 ORC3Q9UBD5 711 aaPredicted RBP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms