RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 GREM1O60565 184 aa5.72□□□□□ -1.49
PTCD3-218ENST00000493430 PEX10O60683 326 aa5.72□□□□□ -1.49
PTCD3-218ENST00000493430 RPL10P27635 214 aaKnown RBP5.72□□□□□ -1.49
PTCD3-218ENST00000493430 PDE6BP35913 854 aa5.72□□□□□ -1.49
PTCD3-218ENST00000493430 LINC00310P59036 64 aa5.72□□□□□ -1.49
PTCD3-218ENST00000493430 ZNF605Q86T29 641 aa5.72□□□□□ -1.49
PTCD3-218ENST00000493430 USHBP1Q8N6Y0 703 aa5.72□□□□□ -1.49
PTCD3-218ENST00000493430 DAGLBQ8NCG7 672 aa5.72□□□□□ -1.49
PTCD3-218ENST00000493430 LRRC3Q9BY71 257 aa5.72□□□□□ -1.49
PTCD3-218ENST00000493430 ZNF552Q9H707 407 aaPredicted RBP5.72□□□□□ -1.49
PTCD3-218ENST00000493430 BRMS1Q9HCU9 246 aa5.72□□□□□ -1.49
PTCD3-218ENST00000493430 COPRSQ9NQ92 184 aa5.72□□□□□ -1.49
PTCD3-218ENST00000493430 KCNQ5Q9NR82 932 aa5.72□□□□□ -1.49
PTCD3-218ENST00000493430 GMIPQ9P107 970 aa5.72□□□□□ -1.49
PTCD3-218ENST00000493430 ZNF281Q9Y2X9 895 aa5.72□□□□□ -1.49
PTCD3-218ENST00000493430 SSU72P8A0A1W2PR75 194 aa5.71□□□□□ -1.5
PTCD3-218ENST00000493430 PSPNO60542 156 aa5.71□□□□□ -1.5
PTCD3-218ENST00000493430 SEMA7AO75326 666 aa5.71□□□□□ -1.5
PTCD3-218ENST00000493430 UBOX5O94941 541 aa5.71□□□□□ -1.5
PTCD3-218ENST00000493430 ATE1O95260 518 aa5.71□□□□□ -1.5
PTCD3-218ENST00000493430 PCBP3P57721 371 aaKnown RBP5.71□□□□□ -1.5
PTCD3-218ENST00000493430 DLG4P78352 724 aa5.71□□□□□ -1.5
PTCD3-218ENST00000493430 RAD51AP2Q09MP3 1159 aa5.71□□□□□ -1.5
PTCD3-218ENST00000493430 TMEM132EQ6IEE7 984 aa5.71□□□□□ -1.5
PTCD3-218ENST00000493430 ZNF655Q8N720 491 aaPredicted RBP5.71□□□□□ -1.5
PTCD3-218ENST00000493430 HDAC8Q9BY41 377 aa5.71□□□□□ -1.5
PTCD3-218ENST00000493430 MCOLN1Q9GZU1 580 aa5.71□□□□□ -1.5
PTCD3-218ENST00000493430 ZMYM5Q9UJ78 669 aa5.71□□□□□ -1.5
PTCD3-218ENST00000493430 CC2D2AQ9P2K1 1620 aa5.7□□□□□ -1.5
PTCD3-218ENST00000493430 MYOCOSA0A1B0GUC4 107 aa5.7□□□□□ -1.5
PTCD3-218ENST00000493430 SLC14A2Q15849 920 aa5.7□□□□□ -1.5
PTCD3-218ENST00000493430 NBPF9Q3BBW0 867 aa5.7□□□□□ -1.5
PTCD3-218ENST00000493430 NBPF12Q5TAG4 269 aaPredicted RBP5.7□□□□□ -1.5
PTCD3-218ENST00000493430 CDCP2Q5VXM1 449 aa5.7□□□□□ -1.5
PTCD3-218ENST00000493430 LILRA6Q6PI73 481 aa5.7□□□□□ -1.5
PTCD3-218ENST00000493430 WAPLQ7Z5K2 1190 aa5.7□□□□□ -1.5
PTCD3-218ENST00000493430 ZNF296Q8WUU4 475 aaPredicted RBP5.7□□□□□ -1.5
PTCD3-218ENST00000493430 SHISA4Q96DD7 197 aa5.7□□□□□ -1.5
PTCD3-218ENST00000493430 TCTN2Q96GX1 697 aa5.7□□□□□ -1.5
PTCD3-218ENST00000493430 G6PC3Q9BUM1 346 aa5.7□□□□□ -1.5
PTCD3-218ENST00000493430 KRTAP4-9Q9BYQ8 210 aa5.7□□□□□ -1.5
PTCD3-218ENST00000493430 GZF1Q9H116 711 aaPredicted RBP5.7□□□□□ -1.5
PTCD3-218ENST00000493430 BCL11AQ9H165 835 aa5.7□□□□□ -1.5
PTCD3-218ENST00000493430 EHMT1Q9H9B1 1298 aa5.7□□□□□ -1.5
PTCD3-218ENST00000493430 TEX51A0A1B0GUA7 166 aa5.69□□□□□ -1.5
PTCD3-218ENST00000493430 OVOS1Q6IE37 1185 aa5.69□□□□□ -1.5
PTCD3-218ENST00000493430 TTLL10Q6ZVT0 673 aa5.69□□□□□ -1.5
PTCD3-218ENST00000493430 HS2ST1Q7LGA3 356 aa5.69□□□□□ -1.5
PTCD3-218ENST00000493430 TMC3Q7Z5M5 1100 aa5.69□□□□□ -1.5
PTCD3-218ENST00000493430 LINC00116Q8NCU8 138 aa5.69□□□□□ -1.5
PTCD3-218ENST00000493430 FOXP3Q9BZS1 431 aa5.69□□□□□ -1.5
PTCD3-218ENST00000493430 IRF2BPLQ9H1B7 796 aa5.69□□□□□ -1.5
PTCD3-218ENST00000493430 RAPGEFL1Q9UHV5 662 aa5.69□□□□□ -1.5
PTCD3-218ENST00000493430 GGT7Q9UJ14 662 aa5.69□□□□□ -1.5
PTCD3-218ENST00000493430 TCFL5Q9UL49 500 aa5.69□□□□□ -1.5
PTCD3-218ENST00000493430 OR14I1A6ND48 311 aa5.68□□□□□ -1.5
PTCD3-218ENST00000493430 NOTOA8MTQ0 251 aa5.68□□□□□ -1.5
PTCD3-218ENST00000493430 CCNFP41002 786 aa5.68□□□□□ -1.5
PTCD3-218ENST00000493430 KIR2DL1P43626 348 aaPredicted RBP5.68□□□□□ -1.5
PTCD3-218ENST00000493430 KIR2DL2P43627 348 aaPredicted RBP5.68□□□□□ -1.5
PTCD3-218ENST00000493430 CRKP46108 304 aa5.68□□□□□ -1.5
PTCD3-218ENST00000493430 GALK1P51570 392 aa5.68□□□□□ -1.5
PTCD3-218ENST00000493430 ZNF326Q5BKZ1 582 aaKnown RBP5.68□□□□□ -1.5
PTCD3-218ENST00000493430 NLRX1Q86UT6 975 aa5.68□□□□□ -1.5
PTCD3-218ENST00000493430 SIRT2Q8IXJ6 389 aa5.68□□□□□ -1.5
PTCD3-218ENST00000493430 REXO1Q8N1G1 1221 aaKnown RBP5.68□□□□□ -1.5
PTCD3-218ENST00000493430 ATG4CQ96DT6 458 aa5.68□□□□□ -1.5
PTCD3-218ENST00000493430 MAP6Q96JE9 813 aa5.68□□□□□ -1.5
PTCD3-218ENST00000493430 BCL2L13Q9BXK5 485 aa5.68□□□□□ -1.5
PTCD3-218ENST00000493430 CNNM2Q9H8M5 875 aa5.68□□□□□ -1.5
PTCD3-218ENST00000493430 NRDCO43847 1150 aa5.67□□□□□ -1.5
PTCD3-218ENST00000493430 CLEC3AO75596 197 aa5.67□□□□□ -1.5
PTCD3-218ENST00000493430 USP2O75604 605 aaPredicted RBP5.67□□□□□ -1.5
PTCD3-218ENST00000493430 SYPP08247 313 aa5.67□□□□□ -1.5
PTCD3-218ENST00000493430 POLR2BP30876 1174 aaKnown RBP5.67□□□□□ -1.5
PTCD3-218ENST00000493430 MCM4P33991 863 aa5.67□□□□□ -1.5
PTCD3-218ENST00000493430 APOBRQ0VD83 1088 aa5.67□□□□□ -1.5
PTCD3-218ENST00000493430 LRRFIP1Q32MZ4 808 aaKnown RBP5.67□□□□□ -1.5
PTCD3-218ENST00000493430 SEZ6Q53EL9 994 aa5.67□□□□□ -1.5
PTCD3-218ENST00000493430 ADGRF1Q5T601 910 aa5.67□□□□□ -1.5
PTCD3-218ENST00000493430 GK5Q6ZS86 529 aa5.67□□□□□ -1.5
PTCD3-218ENST00000493430 CEP128Q6ZU80 1094 aa5.67□□□□□ -1.5
PTCD3-218ENST00000493430 NLRC3Q7RTR2 1065 aa5.67□□□□□ -1.5
PTCD3-218ENST00000493430 CRTAC1Q9NQ79 661 aa5.67□□□□□ -1.5
PTCD3-218ENST00000493430 ADAMTS1Q9UHI8 967 aa5.67□□□□□ -1.5
PTCD3-218ENST00000493430 CNOT6Q9ULM6 557 aaKnown RBP5.67□□□□□ -1.5
PTCD3-218ENST00000493430 MYO15BQ96JP2 1530 aa5.67□□□□□ -1.5
PTCD3-218ENST00000493430 DCAF1Q9Y4B6 1507 aa5.66□□□□□ -1.5
PTCD3-218ENST00000493430 TMEM82A0PJX8 343 aa5.66□□□□□ -1.5
PTCD3-218ENST00000493430 KRTAP9-7A8MTY7 169 aa5.66□□□□□ -1.5
PTCD3-218ENST00000493430 SIGLEC6O43699 453 aa5.66□□□□□ -1.5
PTCD3-218ENST00000493430 FKTNO75072 461 aa5.66□□□□□ -1.5
PTCD3-218ENST00000493430 PRAMEF1O95521 474 aa5.66□□□□□ -1.5
PTCD3-218ENST00000493430 ZNF165P49910 485 aa5.66□□□□□ -1.5
PTCD3-218ENST00000493430 CLCQ05315 142 aa5.66□□□□□ -1.5
PTCD3-218ENST00000493430 SNW1Q13573 536 aaKnown RBP5.66□□□□□ -1.5
PTCD3-218ENST00000493430 ZNF385BQ569K4 471 aa5.66□□□□□ -1.5
PTCD3-218ENST00000493430 HHIPL1Q96JK4 782 aa5.66□□□□□ -1.5
PTCD3-218ENST00000493430 SGPP1Q9BX95 441 aa5.66□□□□□ -1.5
PTCD3-218ENST00000493430 PRDM14Q9GZV8 571 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms