RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-204ENST00000493161 TTYH1Q9H313 450 aaPredicted RBP16.55■□□□□ 0.24
SAMM50-204ENST00000493161 ARHGEF10LQ9HCE6 1279 aa16.55■□□□□ 0.24
SAMM50-204ENST00000493161 SWAP70Q9UH65 585 aa16.55■□□□□ 0.24
SAMM50-204ENST00000493161 PGK1P00558 417 aa16.54■□□□□ 0.24
SAMM50-204ENST00000493161 CDK8P49336 464 aa16.54■□□□□ 0.24
SAMM50-204ENST00000493161 HNRNPUQ00839 825 aaKnown RBP eCLIP16.54■□□□□ 0.24
SAMM50-204ENST00000493161 CLASRPQ8N2M8 674 aaKnown RBP16.54■□□□□ 0.24
SAMM50-204ENST00000493161 MYLIPQ8WY64 445 aa16.54■□□□□ 0.24
SAMM50-204ENST00000493161 LENG1Q96BZ8 264 aaPredicted RBP16.54■□□□□ 0.24
SAMM50-204ENST00000493161 XPNPEP3Q9NQH7 507 aa16.54■□□□□ 0.24
SAMM50-204ENST00000493161 SLC5A4Q9NY91 659 aa16.54■□□□□ 0.24
SAMM50-204ENST00000493161 ADAMTS5Q9UNA0 930 aa16.54■□□□□ 0.24
SAMM50-204ENST00000493161 BAZ2AQ9UIF9 1905 aaKnown RBP16.54■□□□□ 0.24
SAMM50-204ENST00000493161 COL11A1P12107 1806 aaPredicted RBP16.54■□□□□ 0.24
SAMM50-204ENST00000493161 VCANP13611 3396 aa16.53■□□□□ 0.24
SAMM50-204ENST00000493161 USP17L12C9JPN9 530 aa16.53■□□□□ 0.24
SAMM50-204ENST00000493161 USP17L21D6R901 530 aa16.53■□□□□ 0.24
SAMM50-204ENST00000493161 WDR46O15213 610 aaKnown RBP16.53■□□□□ 0.24
SAMM50-204ENST00000493161 IFIT2P09913 472 aaKnown RBP16.53■□□□□ 0.24
SAMM50-204ENST00000493161 EEF2P13639 858 aaKnown RBP16.53■□□□□ 0.24
SAMM50-204ENST00000493161 ADD2P35612 726 aa16.53■□□□□ 0.24
SAMM50-204ENST00000493161 ZNF792Q3KQV3 632 aa16.53■□□□□ 0.24
SAMM50-204ENST00000493161 HSP90AB4PQ58FF6 505 aa16.53■□□□□ 0.24
SAMM50-204ENST00000493161 C12orf60Q5U649 245 aa16.53■□□□□ 0.24
SAMM50-204ENST00000493161 C1orf53Q5VUE5 145 aa16.53■□□□□ 0.24
SAMM50-204ENST00000493161 MMP19Q99542 508 aa16.53■□□□□ 0.24
SAMM50-204ENST00000493161 BOLA2Q9H3K6 86 aa16.53■□□□□ 0.24
SAMM50-204ENST00000493161 PAG1Q9NWQ8 432 aa16.53■□□□□ 0.24
SAMM50-204ENST00000493161 PHF24Q9UPV7 400 aa16.53■□□□□ 0.24
SAMM50-204ENST00000493161 ZNFX1Q9P2E3 1918 aaKnown RBP16.53■□□□□ 0.24
SAMM50-204ENST00000493161 CDH23Q9H251 3354 aa16.52■□□□□ 0.24
SAMM50-204ENST00000493161 SMCHD1A6NHR9 2005 aa16.52■□□□□ 0.24
SAMM50-204ENST00000493161 C16orf86Q6ZW13 317 aa16.52■□□□□ 0.24
SAMM50-204ENST00000493161 RIOX2Q8IUF8 465 aa16.52■□□□□ 0.24
SAMM50-204ENST00000493161 MAFAQ8NHW3 353 aaPredicted RBP16.52■□□□□ 0.24
SAMM50-204ENST00000493161 KIF1BPQ96EK5 621 aa16.52■□□□□ 0.24
SAMM50-204ENST00000493161 ATP8A2Q9NTI2 1148 aa16.52■□□□□ 0.24
SAMM50-204ENST00000493161 PRUNE2Q8WUY3 3088 aa16.52■□□□□ 0.23
SAMM50-204ENST00000493161 MYH8P13535 1937 aa16.52■□□□□ 0.23
SAMM50-204ENST00000493161 VWA5AO00534 786 aa16.51■□□□□ 0.23
SAMM50-204ENST00000493161 SLC25A27O95847 323 aa16.51■□□□□ 0.23
SAMM50-204ENST00000493161 ZNF865P0CJ78 1059 aaPredicted RBP16.51■□□□□ 0.23
SAMM50-204ENST00000493161 RARBP10826 455 aa16.51■□□□□ 0.23
SAMM50-204ENST00000493161 SMAD3P84022 425 aaKnown RBP16.51■□□□□ 0.23
SAMM50-204ENST00000493161 FAM83BQ5T0W9 1011 aa16.51■□□□□ 0.23
SAMM50-204ENST00000493161 REPS2Q8NFH8 660 aa16.51■□□□□ 0.23
SAMM50-204ENST00000493161 TINF2Q9BSI4 451 aa16.51■□□□□ 0.23
SAMM50-204ENST00000493161 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.51■□□□□ 0.23
SAMM50-204ENST00000493161 SH2D4AQ9H788 454 aa16.51■□□□□ 0.23
SAMM50-204ENST00000493161 ZNF214Q9UL59 606 aaPredicted RBP16.51■□□□□ 0.23
SAMM50-204ENST00000493161 A0A1W2PQ45 241 aaPredicted RBP16.5■□□□□ 0.23
SAMM50-204ENST00000493161 A0A1W2PQY0 241 aa16.5■□□□□ 0.23
SAMM50-204ENST00000493161 RAD21O60216 631 aa16.5■□□□□ 0.23
SAMM50-204ENST00000493161 CLTBP09497 229 aa16.5■□□□□ 0.23
SAMM50-204ENST00000493161 STAT3P40763 770 aa16.5■□□□□ 0.23
SAMM50-204ENST00000493161 CTR9Q6PD62 1173 aa16.5■□□□□ 0.23
SAMM50-204ENST00000493161 CCDC17Q96LX7 622 aa16.5■□□□□ 0.23
SAMM50-204ENST00000493161 NUP88Q99567 741 aaPredicted RBP16.5■□□□□ 0.23
SAMM50-204ENST00000493161 PPP1R9AQ9ULJ8 1098 aa16.5■□□□□ 0.23
SAMM50-204ENST00000493161 TACC3Q9Y6A5 838 aa16.5■□□□□ 0.23
SAMM50-204ENST00000493161 PQBP1O60828 265 aaKnown RBP16.49■□□□□ 0.23
SAMM50-204ENST00000493161 ATP5JP18859 108 aa16.49■□□□□ 0.23
SAMM50-204ENST00000493161 IRX5P78411 483 aaPredicted RBP16.49■□□□□ 0.23
SAMM50-204ENST00000493161 KCTD2Q14681 263 aa16.49■□□□□ 0.23
SAMM50-204ENST00000493161 PUS7LQ9H0K6 701 aaKnown RBP16.49■□□□□ 0.23
SAMM50-204ENST00000493161 KANSL2Q9H9L4 492 aa16.49■□□□□ 0.23
SAMM50-204ENST00000493161 NRBP1Q9UHY1 535 aa16.49■□□□□ 0.23
SAMM50-204ENST00000493161 SLC4A4Q9Y6R1 1079 aa16.49■□□□□ 0.23
SAMM50-204ENST00000493161 PLXNA1Q9UIW2 1896 aa16.48■□□□□ 0.23
SAMM50-204ENST00000493161 KIAA0355O15063 1070 aa16.48■□□□□ 0.23
SAMM50-204ENST00000493161 ADAMTS4O75173 837 aa16.48■□□□□ 0.23
SAMM50-204ENST00000493161 RNF180Q86T96 592 aa16.48■□□□□ 0.23
SAMM50-204ENST00000493161 RPAP2Q8IXW5 612 aaPredicted RBP16.48■□□□□ 0.23
SAMM50-204ENST00000493161 STK11IPQ8N1F8 1099 aa16.48■□□□□ 0.23
SAMM50-204ENST00000493161 RNPC3Q96LT9 517 aaKnown RBP16.48■□□□□ 0.23
SAMM50-204ENST00000493161 HAUS7Q99871 368 aa16.48■□□□□ 0.23
SAMM50-204ENST00000493161 ZBTB40Q9NUA8 1239 aa16.48■□□□□ 0.23
SAMM50-204ENST00000493161 DIS3Q9Y2L1 958 aaKnown RBP16.48■□□□□ 0.23
SAMM50-204ENST00000493161 RIPK3Q9Y572 518 aa16.48■□□□□ 0.23
SAMM50-204ENST00000493161 ZBED9Q6R2W3 1325 aa16.47■□□□□ 0.23
SAMM50-204ENST00000493161 MYADML2A6NDP7 307 aa16.47■□□□□ 0.23
SAMM50-204ENST00000493161 SNAI1O95863 264 aaPredicted RBP16.47■□□□□ 0.23
SAMM50-204ENST00000493161 RAG1P15918 1043 aa16.47■□□□□ 0.23
SAMM50-204ENST00000493161 FAAP100Q0VG06 881 aa16.47■□□□□ 0.23
SAMM50-204ENST00000493161 UBE3CQ15386 1083 aa16.47■□□□□ 0.23
SAMM50-204ENST00000493161 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.47■□□□□ 0.234e-6■■□□□ 13.6
SAMM50-204ENST00000493161 GOPCQ9HD26 462 aa16.47■□□□□ 0.23
SAMM50-204ENST00000493161 TMEM39AQ9NV64 488 aa16.47■□□□□ 0.23
SAMM50-204ENST00000493161 COG6Q9Y2V7 657 aa16.47■□□□□ 0.23
SAMM50-204ENST00000493161 SPTBN5Q9NRC6 3674 aaKnown RBP16.47■□□□□ 0.23
SAMM50-204ENST00000493161 SYNRGQ9UMZ2 1314 aa16.46■□□□□ 0.23
SAMM50-204ENST00000493161 RAB11FIP3O75154 756 aa16.46■□□□□ 0.23
SAMM50-204ENST00000493161 AKR1A1P14550 325 aa16.46■□□□□ 0.23
SAMM50-204ENST00000493161 FOSL2P15408 326 aa16.46■□□□□ 0.23
SAMM50-204ENST00000493161 ACLYP53396 1101 aa16.46■□□□□ 0.23
SAMM50-204ENST00000493161 AMOTL1Q8IY63 956 aa16.46■□□□□ 0.23
SAMM50-204ENST00000493161 CNPY2Q9Y2B0 182 aa16.46■□□□□ 0.23
SAMM50-204ENST00000493161 ROBO3Q96MS0 1386 aa16.46■□□□□ 0.23
SAMM50-204ENST00000493161 GREB1LQ9C091 1923 aaPredicted RBP16.45■□□□□ 0.22
SAMM50-204ENST00000493161 ADCY6O43306 1168 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms