RNA–Protein interactions for RNA: ENST00000492466.2

SS18L1-205, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18L1, Length 899 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-205ENST00000492466 SYN1P17600 705 aa17.48■□□□□ 0.39
SS18L1-205ENST00000492466 CYP2C19P33261 490 aa17.48■□□□□ 0.39
SS18L1-205ENST00000492466 CTR9Q6PD62 1173 aa17.48■□□□□ 0.39
SS18L1-205ENST00000492466 C16orf86Q6ZW13 317 aa17.48■□□□□ 0.39
SS18L1-205ENST00000492466 LPAR1Q92633 364 aa17.48■□□□□ 0.39
SS18L1-205ENST00000492466 LRCH3Q96II8 777 aa17.48■□□□□ 0.39
SS18L1-205ENST00000492466 CCDC17Q96LX7 622 aa17.48■□□□□ 0.39
SS18L1-205ENST00000492466 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.48■□□□□ 0.39
SS18L1-205ENST00000492466 TANGO6Q9C0B7 1094 aa17.48■□□□□ 0.39
SS18L1-205ENST00000492466 SPATC1LQ9H0A9 340 aa17.48■□□□□ 0.39
SS18L1-205ENST00000492466 NAPBQ9H115 298 aa17.48■□□□□ 0.39
SS18L1-205ENST00000492466 VCPKMTQ9H867 229 aa17.48■□□□□ 0.39
SS18L1-205ENST00000492466 CWC22Q9HCG8 908 aaKnown RBP17.48■□□□□ 0.39
SS18L1-205ENST00000492466 PARP14Q460N5 1801 aa17.48■□□□□ 0.39
SS18L1-205ENST00000492466 ZNF236Q9UL36 1845 aa17.47■□□□□ 0.39
SS18L1-205ENST00000492466 STRNO43815 780 aa17.47■□□□□ 0.39
SS18L1-205ENST00000492466 COBLO75128 1261 aa17.47■□□□□ 0.39
SS18L1-205ENST00000492466 ERCC3P19447 782 aa17.47■□□□□ 0.39
SS18L1-205ENST00000492466 PDE4AP27815 886 aa17.47■□□□□ 0.39
SS18L1-205ENST00000492466 ICA1Q05084 483 aa17.47■□□□□ 0.39
SS18L1-205ENST00000492466 LRRC26Q2I0M4 334 aa17.47■□□□□ 0.39
SS18L1-205ENST00000492466 MFSD14CQ5VZR4 134 aa17.47■□□□□ 0.39
SS18L1-205ENST00000492466 CCDC129Q6ZRS4 1044 aa17.47■□□□□ 0.39
SS18L1-205ENST00000492466 SPICE1Q8N0Z3 855 aa17.47■□□□□ 0.39
SS18L1-205ENST00000492466 STK11IPQ8N1F8 1099 aa17.47■□□□□ 0.39
SS18L1-205ENST00000492466 SHCBP1Q8NEM2 672 aa17.47■□□□□ 0.39
SS18L1-205ENST00000492466 ADAMTS5Q9UNA0 930 aa17.47■□□□□ 0.39
SS18L1-205ENST00000492466 IVNS1ABPQ9Y6Y0 642 aa17.47■□□□□ 0.39
SS18L1-205ENST00000492466 HIP1O00291 1037 aa17.46■□□□□ 0.39
SS18L1-205ENST00000492466 CYBAP13498 195 aa17.46■□□□□ 0.39
SS18L1-205ENST00000492466 ADORA2AP29274 412 aa17.46■□□□□ 0.39
SS18L1-205ENST00000492466 MAGEA10P43363 369 aaPredicted RBP17.46■□□□□ 0.39
SS18L1-205ENST00000492466 MFAP1P55081 439 aaKnown RBP17.46■□□□□ 0.39
SS18L1-205ENST00000492466 ATP2B2Q01814 1243 aa17.46■□□□□ 0.39
SS18L1-205ENST00000492466 NMIQ13287 307 aaPredicted RBP17.46■□□□□ 0.39
SS18L1-205ENST00000492466 TTC22Q5TAA0 569 aa17.46■□□□□ 0.39
SS18L1-205ENST00000492466 GIMAP6Q6P9H5 292 aa17.46■□□□□ 0.39
SS18L1-205ENST00000492466 ATG4CQ96DT6 458 aa17.46■□□□□ 0.39
SS18L1-205ENST00000492466 HELLSQ9NRZ9 838 aa17.46■□□□□ 0.39
SS18L1-205ENST00000492466 DDX20Q9UHI6 824 aaKnown RBP17.46■□□□□ 0.39
SS18L1-205ENST00000492466 A0A0D9SFI3 127 aa17.45■□□□□ 0.38
SS18L1-205ENST00000492466 GSG1L2A8MUP6 293 aa17.45■□□□□ 0.38
SS18L1-205ENST00000492466 SLC3A2P08195 630 aaKnown RBP17.45■□□□□ 0.38
SS18L1-205ENST00000492466 EEF2P13639 858 aaKnown RBP17.45■□□□□ 0.38
SS18L1-205ENST00000492466 OLFML2BQ68BL8 750 aa17.45■□□□□ 0.38
SS18L1-205ENST00000492466 MB21D1Q8N884 522 aa17.45■□□□□ 0.38
SS18L1-205ENST00000492466 FAM227BQ96M60 508 aa17.45■□□□□ 0.38
SS18L1-205ENST00000492466 ARHGEF10LQ9HCE6 1279 aa17.45■□□□□ 0.38
SS18L1-205ENST00000492466 EPB41L4AQ9HCS5 686 aaPredicted RBP17.45■□□□□ 0.38
SS18L1-205ENST00000492466 UNC80Q8N2C7 3258 aa17.45■□□□□ 0.38
SS18L1-205ENST00000492466 EYSQ5T1H1 3165 aa17.44■□□□□ 0.38
SS18L1-205ENST00000492466 PATL2C9JE40 543 aaKnown RBP17.44■□□□□ 0.38
SS18L1-205ENST00000492466 WDR46O15213 610 aaKnown RBP17.44■□□□□ 0.38
SS18L1-205ENST00000492466 FLOT1O75955 427 aa17.44■□□□□ 0.38
SS18L1-205ENST00000492466 TMEM132BQ14DG7 1078 aa17.44■□□□□ 0.38
SS18L1-205ENST00000492466 MCMDC2Q4G0Z9 681 aa17.44■□□□□ 0.38
SS18L1-205ENST00000492466 DPP9Q86TI2 863 aa17.44■□□□□ 0.38
SS18L1-205ENST00000492466 MKNK2Q9HBH9 465 aa17.44■□□□□ 0.38
SS18L1-205ENST00000492466 ZNF287Q9HBT7 754 aa17.44■□□□□ 0.38
SS18L1-205ENST00000492466 FBXO28Q9NVF7 368 aa17.44■□□□□ 0.38
SS18L1-205ENST00000492466 GREB1LQ9C091 1923 aaPredicted RBP17.44■□□□□ 0.38
SS18L1-205ENST00000492466 LAMA4Q16363 1823 aa17.44■□□□□ 0.38
SS18L1-205ENST00000492466 CCDC171Q6TFL3 1326 aa17.44■□□□□ 0.38
SS18L1-205ENST00000492466 MYH4Q9Y623 1939 aa17.43■□□□□ 0.38
SS18L1-205ENST00000492466 MSCO60682 206 aa17.43■□□□□ 0.38
SS18L1-205ENST00000492466 SDSP20132 328 aa17.43■□□□□ 0.38
SS18L1-205ENST00000492466 SBK1Q52WX2 424 aa17.43■□□□□ 0.38
SS18L1-205ENST00000492466 TICAM2Q86XR7 235 aa17.43■□□□□ 0.38
SS18L1-205ENST00000492466 IFNL3Q8IZI9 196 aa17.43■□□□□ 0.38
SS18L1-205ENST00000492466 ABRAQ8N0Z2 381 aa17.43■□□□□ 0.38
SS18L1-205ENST00000492466 MROH8Q9H579 483 aa17.43■□□□□ 0.38
SS18L1-205ENST00000492466 SH2D4AQ9H788 454 aa17.43■□□□□ 0.38
SS18L1-205ENST00000492466 KANSL2Q9H9L4 492 aa17.43■□□□□ 0.38
SS18L1-205ENST00000492466 ROBO3Q96MS0 1386 aa17.42■□□□□ 0.38
SS18L1-205ENST00000492466 CDH23Q9H251 3354 aa17.42■□□□□ 0.38
SS18L1-205ENST00000492466 CNGA1P29973 690 aa17.42■□□□□ 0.38
SS18L1-205ENST00000492466 CWC27Q6UX04 472 aaKnown RBP17.42■□□□□ 0.38
SS18L1-205ENST00000492466 REPS2Q8NFH8 660 aa17.42■□□□□ 0.38
SS18L1-205ENST00000492466 SENP6Q9GZR1 1112 aaPredicted RBP17.42■□□□□ 0.38
SS18L1-205ENST00000492466 COL11A1P12107 1806 aaPredicted RBP17.42■□□□□ 0.38
SS18L1-205ENST00000492466 ZNFX1Q9P2E3 1918 aaKnown RBP17.41■□□□□ 0.38
SS18L1-205ENST00000492466 DNM1LO00429 736 aa17.41■□□□□ 0.38
SS18L1-205ENST00000492466 RASA1P20936 1047 aa17.41■□□□□ 0.38
SS18L1-205ENST00000492466 PDE4BQ07343 736 aa17.41■□□□□ 0.38
SS18L1-205ENST00000492466 PLS1Q14651 629 aa17.41■□□□□ 0.38
SS18L1-205ENST00000492466 LRIT3Q3SXY7 679 aa17.41■□□□□ 0.38
SS18L1-205ENST00000492466 PRAMEF19Q5SWL8 479 aa17.41■□□□□ 0.38
SS18L1-205ENST00000492466 NCAPG2Q86XI2 1143 aa17.41■□□□□ 0.38
SS18L1-205ENST00000492466 TDHQ8IZJ6 230 aa17.41■□□□□ 0.38
SS18L1-205ENST00000492466 MAML3Q96JK9 1138 aa17.41■□□□□ 0.38
SS18L1-205ENST00000492466 ZNF214Q9UL59 606 aaPredicted RBP17.41■□□□□ 0.38
SS18L1-205ENST00000492466 VWA5AO00534 786 aa17.4■□□□□ 0.38
SS18L1-205ENST00000492466 SEPT4O43236 478 aa17.4■□□□□ 0.38
SS18L1-205ENST00000492466 GSPT1P15170 499 aaKnown RBP17.4■□□□□ 0.38
SS18L1-205ENST00000492466 TOMM22Q9NS69 142 aa17.4■□□□□ 0.38
SS18L1-205ENST00000492466 PPP1R9AQ9ULJ8 1098 aa17.4■□□□□ 0.38
SS18L1-205ENST00000492466 RAD21O60216 631 aa17.39■□□□□ 0.37
SS18L1-205ENST00000492466 SLC25A27O95847 323 aa17.39■□□□□ 0.37
SS18L1-205ENST00000492466 PPARAQ07869 468 aa17.39■□□□□ 0.37
SS18L1-205ENST00000492466 FAM83BQ5T0W9 1011 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms