RNA–Protein interactions for RNA: ENST00000492462.1

MDC1-207, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-207ENST00000492462 HOXC10Q9NYD6 342 aa14.04□□□□□ -0.16
MDC1-207ENST00000492462 NYAP2Q9P242 653 aa14.04□□□□□ -0.16
MDC1-207ENST00000492462 CLIP2Q9UDT6 1046 aa14.04□□□□□ -0.16
MDC1-207ENST00000492462 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.04□□□□□ -0.16
MDC1-207ENST00000492462 SGPL1O95470 568 aa14.03□□□□□ -0.16
MDC1-207ENST00000492462 PTPREP23469 700 aa14.03□□□□□ -0.16
MDC1-207ENST00000492462 CCNA1P78396 465 aa14.03□□□□□ -0.16
MDC1-207ENST00000492462 MCMDC2Q4G0Z9 681 aa14.03□□□□□ -0.16
MDC1-207ENST00000492462 LRRC47Q8N1G4 583 aaKnown RBP14.03□□□□□ -0.16
MDC1-207ENST00000492462 SPATC1LQ9H0A9 340 aa14.03□□□□□ -0.16
MDC1-207ENST00000492462 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.03□□□□□ -0.16
MDC1-207ENST00000492462 CWC22Q9HCG8 908 aaKnown RBP14.03□□□□□ -0.16
MDC1-207ENST00000492462 GOPCQ9HD26 462 aa14.03□□□□□ -0.16
MDC1-207ENST00000492462 PAK6Q9NQU5 681 aaPredicted RBP14.03□□□□□ -0.16
MDC1-207ENST00000492462 FLRT1Q9NZU1 646 aa14.03□□□□□ -0.16
MDC1-207ENST00000492462 ZNFX1Q9P2E3 1918 aaKnown RBP14.02□□□□□ -0.16
MDC1-207ENST00000492462 F5H6K3 240 aa14.02□□□□□ -0.17
MDC1-207ENST00000492462 NDUFB10O96000 172 aa14.02□□□□□ -0.17
MDC1-207ENST00000492462 XRCC5P13010 732 aaKnown RBP14.02□□□□□ -0.17
MDC1-207ENST00000492462 ERCC3P19447 782 aa14.02□□□□□ -0.17
MDC1-207ENST00000492462 SDSP20132 328 aa14.02□□□□□ -0.17
MDC1-207ENST00000492462 RGS2P41220 211 aa14.02□□□□□ -0.17
MDC1-207ENST00000492462 TFAP4Q01664 338 aa14.02□□□□□ -0.17
MDC1-207ENST00000492462 PDE4BQ07343 736 aa14.02□□□□□ -0.17
MDC1-207ENST00000492462 KLRC3Q07444 240 aa14.02□□□□□ -0.17
MDC1-207ENST00000492462 MAP2K5Q13163 448 aa14.02□□□□□ -0.17
MDC1-207ENST00000492462 PLS1Q14651 629 aa14.02□□□□□ -0.17
MDC1-207ENST00000492462 ALX1Q15699 326 aa14.02□□□□□ -0.17
MDC1-207ENST00000492462 UBE2Q1Q7Z7E8 422 aa14.02□□□□□ -0.17
MDC1-207ENST00000492462 NEDD1Q8NHV4 660 aa14.02□□□□□ -0.17
MDC1-207ENST00000492462 MTMR4Q9NYA4 1195 aa14.02□□□□□ -0.17
MDC1-207ENST00000492462 ADAMTS5Q9UNA0 930 aa14.02□□□□□ -0.17
MDC1-207ENST00000492462 PLIN4Q96Q06 1357 aa14.01□□□□□ -0.17
MDC1-207ENST00000492462 CCDC171Q6TFL3 1326 aa14.01□□□□□ -0.17
MDC1-207ENST00000492462 SLC15A5A6NIM6 579 aa14.01□□□□□ -0.17
MDC1-207ENST00000492462 NMT2O60551 498 aa14.01□□□□□ -0.17
MDC1-207ENST00000492462 FGAP02671 866 aa14.01□□□□□ -0.17
MDC1-207ENST00000492462 SLC3A2P08195 630 aaKnown RBP14.01□□□□□ -0.17
MDC1-207ENST00000492462 TSPY3P0CV98 308 aa14.01□□□□□ -0.17
MDC1-207ENST00000492462 TSPY8P0CW00 308 aa14.01□□□□□ -0.17
MDC1-207ENST00000492462 HSPD1P10809 573 aaKnown RBP14.01□□□□□ -0.17
MDC1-207ENST00000492462 PRKAR2AP13861 404 aaKnown RBP14.01□□□□□ -0.17
MDC1-207ENST00000492462 ZKSCAN1P17029 563 aaPredicted RBP14.01□□□□□ -0.17
MDC1-207ENST00000492462 GRB14Q14449 540 aa14.01□□□□□ -0.17
MDC1-207ENST00000492462 TMEM132BQ14DG7 1078 aa14.01□□□□□ -0.17
MDC1-207ENST00000492462 MAP3K21Q5TCX8 1036 aa14.01□□□□□ -0.17
MDC1-207ENST00000492462 NPLOC4Q8TAT6 608 aa14.01□□□□□ -0.17
MDC1-207ENST00000492462 NKX2-3Q8TAU0 364 aa14.01□□□□□ -0.17
MDC1-207ENST00000492462 MKL1Q969V6 931 aa14.01□□□□□ -0.17
MDC1-207ENST00000492462 CHMP4CQ96CF2 233 aa14.01□□□□□ -0.17
MDC1-207ENST00000492462 APBA2Q99767 749 aa14.01□□□□□ -0.17
MDC1-207ENST00000492462 ZNF287Q9HBT7 754 aa14.01□□□□□ -0.17
MDC1-207ENST00000492462 ANAPC4Q9UJX5 808 aa14.01□□□□□ -0.17
MDC1-207ENST00000492462 PPP1R9AQ9ULJ8 1098 aa14.01□□□□□ -0.17
MDC1-207ENST00000492462 RPTORQ8N122 1335 aa14□□□□□ -0.17
MDC1-207ENST00000492462 TFRCP02786 760 aaKnown RBP14□□□□□ -0.17
MDC1-207ENST00000492462 HAND2P61296 217 aa14□□□□□ -0.17
MDC1-207ENST00000492462 CACNB2Q08289 660 aaPredicted RBP14□□□□□ -0.17
MDC1-207ENST00000492462 MB21D1Q8N884 522 aa14□□□□□ -0.17
MDC1-207ENST00000492462 REPS2Q8NFH8 660 aa14□□□□□ -0.17
MDC1-207ENST00000492462 NBPF3Q9H094 633 aa14□□□□□ -0.17
MDC1-207ENST00000492462 CRISPLD2Q9H0B8 497 aa14□□□□□ -0.17
MDC1-207ENST00000492462 HMX1Q9NP08 348 aaPredicted RBP14□□□□□ -0.17
MDC1-207ENST00000492462 IL17RBQ9NRM6 502 aa14□□□□□ -0.17
MDC1-207ENST00000492462 IVNS1ABPQ9Y6Y0 642 aa14□□□□□ -0.17
MDC1-207ENST00000492462 ZNF236Q9UL36 1845 aa13.99□□□□□ -0.17
MDC1-207ENST00000492462 VWA5AO00534 786 aa13.99□□□□□ -0.17
MDC1-207ENST00000492462 COBLO75128 1261 aa13.99□□□□□ -0.17
MDC1-207ENST00000492462 FARP2O94887 1054 aaPredicted RBP13.99□□□□□ -0.17
MDC1-207ENST00000492462 TTLL1O95922 423 aa13.99□□□□□ -0.17
MDC1-207ENST00000492462 HOXC6P09630 235 aa13.99□□□□□ -0.17
MDC1-207ENST00000492462 GSPT1P15170 499 aaKnown RBP13.99□□□□□ -0.17
MDC1-207ENST00000492462 ADORA2AP29274 412 aa13.99□□□□□ -0.17
MDC1-207ENST00000492462 CCND3P30281 292 aaPredicted RBP13.99□□□□□ -0.17
MDC1-207ENST00000492462 CWC27Q6UX04 472 aaKnown RBP13.99□□□□□ -0.17
MDC1-207ENST00000492462 RASGRP2Q7LDG7 609 aa13.99□□□□□ -0.17
MDC1-207ENST00000492462 NCAPG2Q86XI2 1143 aa13.99□□□□□ -0.17
MDC1-207ENST00000492462 TICAM2Q86XR7 235 aa13.99□□□□□ -0.17
MDC1-207ENST00000492462 SHCBP1Q8NEM2 672 aa13.99□□□□□ -0.17
MDC1-207ENST00000492462 DIS3LQ8TF46 1054 aaKnown RBP13.99□□□□□ -0.17
MDC1-207ENST00000492462 SLF1Q9BQI6 1058 aa13.99□□□□□ -0.17
MDC1-207ENST00000492462 IL25Q9H293 177 aa13.99□□□□□ -0.17
MDC1-207ENST00000492462 ALPK3Q96L96 1907 aa13.98□□□□□ -0.17
MDC1-207ENST00000492462 TSPY2A6NKD2 308 aa13.98□□□□□ -0.17
MDC1-207ENST00000492462 ORC4O43929 436 aa13.98□□□□□ -0.17
MDC1-207ENST00000492462 RANBP6O60518 1105 aaKnown RBP13.98□□□□□ -0.17
MDC1-207ENST00000492462 FGRP09769 529 aa13.98□□□□□ -0.17
MDC1-207ENST00000492462 CYP2C19P33261 490 aa13.98□□□□□ -0.17
MDC1-207ENST00000492462 SLFN13Q68D06 897 aa13.98□□□□□ -0.17
MDC1-207ENST00000492462 TBC1D10CQ8IV04 446 aa13.98□□□□□ -0.17
MDC1-207ENST00000492462 ZNF214Q9UL59 606 aaPredicted RBP13.98□□□□□ -0.17
MDC1-207ENST00000492462 FRMPD3Q5JV73 1810 aa13.97□□□□□ -0.17
MDC1-207ENST00000492462 IGHA2P01877 340 aa13.97□□□□□ -0.17
MDC1-207ENST00000492462 STAT3P40763 770 aa13.97□□□□□ -0.17
MDC1-207ENST00000492462 RRP12Q5JTH9 1297 aaKnown RBP13.97□□□□□ -0.17
MDC1-207ENST00000492462 TTC22Q5TAA0 569 aa13.97□□□□□ -0.17
MDC1-207ENST00000492462 RIOX2Q8IUF8 465 aa13.97□□□□□ -0.17
MDC1-207ENST00000492462 TRMT44Q8IYL2 757 aaKnown RBP13.97□□□□□ -0.17
MDC1-207ENST00000492462 GMCL1P1Q8NEA9 526 aa13.97□□□□□ -0.17
MDC1-207ENST00000492462 TRPV1Q8NER1 839 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 152.5 ms