RNA–Protein interactions for RNA: ENST00000492423.5

COPS7B-222, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 2

Gene COPS7B, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-222ENST00000492423 SCYL3Q8IZE3 742 aa17.3■□□□□ 0.36
COPS7B-222ENST00000492423 FAM184AQ8NB25 1140 aa17.3■□□□□ 0.36
COPS7B-222ENST00000492423 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.3■□□□□ 0.36
COPS7B-222ENST00000492423 AIFM3Q96NN9 605 aa17.3■□□□□ 0.36
COPS7B-222ENST00000492423 WRNIP1Q96S55 665 aa17.3■□□□□ 0.36
COPS7B-222ENST00000492423 SLC26A6Q9BXS9 759 aa17.3■□□□□ 0.36
COPS7B-222ENST00000492423 ARHGEF10LQ9HCE6 1279 aa17.3■□□□□ 0.36
COPS7B-222ENST00000492423 NMRK2Q9NPI5 230 aa17.3■□□□□ 0.36
COPS7B-222ENST00000492423 GOLGA8HP0CJ92 632 aa17.29■□□□□ 0.36
COPS7B-222ENST00000492423 PDCP20941 246 aa17.29■□□□□ 0.36
COPS7B-222ENST00000492423 GNAQP50148 359 aa17.29■□□□□ 0.36
COPS7B-222ENST00000492423 FOSBP53539 338 aa17.29■□□□□ 0.36
COPS7B-222ENST00000492423 CDC37L1Q7L3B6 337 aa17.29■□□□□ 0.36
COPS7B-222ENST00000492423 CCDC82Q8N4S0 544 aa17.29■□□□□ 0.36
COPS7B-222ENST00000492423 GMCL1P1Q8NEA9 526 aa17.29■□□□□ 0.36
COPS7B-222ENST00000492423 TMX2Q9Y320 296 aa17.29■□□□□ 0.36
COPS7B-222ENST00000492423 KIF3AQ9Y496 699 aa17.29■□□□□ 0.36
COPS7B-222ENST00000492423 LOC285556D6RIA3 1793 aa17.28■□□□□ 0.36
COPS7B-222ENST00000492423 FRMPD2Q68DX3 1309 aaPredicted RBP17.28■□□□□ 0.36
COPS7B-222ENST00000492423 PRPF3O43395 683 aaKnown RBP17.28■□□□□ 0.36
COPS7B-222ENST00000492423 CYTH3O43739 400 aa17.28■□□□□ 0.36
COPS7B-222ENST00000492423 NDUFB10O96000 172 aa17.28■□□□□ 0.36
COPS7B-222ENST00000492423 PKN1Q16512 942 aa17.28■□□□□ 0.36
COPS7B-222ENST00000492423 KIAA1755Q5JYT7 1200 aa17.28■□□□□ 0.36
COPS7B-222ENST00000492423 SLFN13Q68D06 897 aa17.28■□□□□ 0.36
COPS7B-222ENST00000492423 TRIM22Q8IYM9 498 aa17.28■□□□□ 0.36
COPS7B-222ENST00000492423 DCAF4Q8WV16 495 aa17.28■□□□□ 0.36
COPS7B-222ENST00000492423 ALG1Q9BT22 464 aa17.28■□□□□ 0.36
COPS7B-222ENST00000492423 SPZ1Q9BXG8 430 aa17.28■□□□□ 0.36
COPS7B-222ENST00000492423 CPVLQ9H3G5 476 aa17.28■□□□□ 0.36
COPS7B-222ENST00000492423 WDR33Q9C0J8 1336 aaKnown RBP17.27■□□□□ 0.36
COPS7B-222ENST00000492423 VPS37CA5D8V6 355 aaPredicted RBP17.27■□□□□ 0.36
COPS7B-222ENST00000492423 KLRF2D3W0D1 207 aa17.27■□□□□ 0.36
COPS7B-222ENST00000492423 F5H6K3 240 aa17.27■□□□□ 0.36
COPS7B-222ENST00000492423 DEXIO95424 95 aa17.27■□□□□ 0.36
COPS7B-222ENST00000492423 ZSCAN22P10073 491 aaPredicted RBP17.27■□□□□ 0.36
COPS7B-222ENST00000492423 KLRC3Q07444 240 aa17.27■□□□□ 0.36
COPS7B-222ENST00000492423 PRKG1Q13976 671 aa17.27■□□□□ 0.36
COPS7B-222ENST00000492423 CCDC96Q2M329 555 aa17.27■□□□□ 0.36
COPS7B-222ENST00000492423 MAP1SQ66K74 1059 aaPredicted RBP17.27■□□□□ 0.36
COPS7B-222ENST00000492423 TNPO1Q92973 898 aaKnown RBP17.27■□□□□ 0.36
COPS7B-222ENST00000492423 ZKSCAN4Q969J2 545 aaPredicted RBP17.27■□□□□ 0.36
COPS7B-222ENST00000492423 LZTS2Q9BRK4 669 aa17.27■□□□□ 0.36
COPS7B-222ENST00000492423 RLFQ13129 1914 aa17.26■□□□□ 0.35
COPS7B-222ENST00000492423 F13A1P00488 732 aa17.26■□□□□ 0.35
COPS7B-222ENST00000492423 PTPRAP18433 802 aa17.26■□□□□ 0.35
COPS7B-222ENST00000492423 SMARCA1P28370 1054 aa17.26■□□□□ 0.35
COPS7B-222ENST00000492423 GPATCH4Q5T3I0 446 aaKnown RBP17.26■□□□□ 0.35
COPS7B-222ENST00000492423 FOXD4L5Q5VV16 416 aaPredicted RBP17.26■□□□□ 0.35
COPS7B-222ENST00000492423 LHX8Q68G74 356 aa17.26■□□□□ 0.35
COPS7B-222ENST00000492423 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.26■□□□□ 0.35
COPS7B-222ENST00000492423 LDHDQ86WU2 507 aa17.26■□□□□ 0.35
COPS7B-222ENST00000492423 FOXD4L4Q8WXT5 416 aaPredicted RBP17.26■□□□□ 0.35
COPS7B-222ENST00000492423 SHISA4Q96DD7 197 aa17.26■□□□□ 0.35
COPS7B-222ENST00000492423 GMCL1Q96IK5 515 aa17.26■□□□□ 0.35
COPS7B-222ENST00000492423 RIOX1Q9H6W3 641 aa17.26■□□□□ 0.35
COPS7B-222ENST00000492423 VCPKMTQ9H867 229 aa17.26■□□□□ 0.35
COPS7B-222ENST00000492423 GPCPD1Q9NPB8 672 aa17.26■□□□□ 0.35
COPS7B-222ENST00000492423 GJB4Q9NTQ9 266 aa17.26■□□□□ 0.35
COPS7B-222ENST00000492423 SNCAIPQ9Y6H5 919 aa17.26■□□□□ 0.35
COPS7B-222ENST00000492423 hCG_1642624A0A1W2PR95 340 aa17.25■□□□□ 0.35
COPS7B-222ENST00000492423 PDIA4P13667 645 aaKnown RBP17.25■□□□□ 0.35
COPS7B-222ENST00000492423 CD44P16070 742 aaKnown RBP17.25■□□□□ 0.35
COPS7B-222ENST00000492423 MAP3K9P80192 1104 aa17.25■□□□□ 0.35
COPS7B-222ENST00000492423 MAP3K11Q16584 847 aa17.25■□□□□ 0.35
COPS7B-222ENST00000492423 OTUD7BQ6GQQ9 843 aa17.25■□□□□ 0.35
COPS7B-222ENST00000492423 TTBK2Q6IQ55 1244 aa17.25■□□□□ 0.35
COPS7B-222ENST00000492423 KCTD1Q719H9 257 aa17.25■□□□□ 0.35
COPS7B-222ENST00000492423 RGS22Q8NE09 1264 aa17.25■□□□□ 0.35
COPS7B-222ENST00000492423 ZNF526Q8TF50 670 aaPredicted RBP17.25■□□□□ 0.35
COPS7B-222ENST00000492423 C8orf76Q96K31 380 aa17.25■□□□□ 0.35
COPS7B-222ENST00000492423 NUP88Q99567 741 aaPredicted RBP17.25■□□□□ 0.35
COPS7B-222ENST00000492423 SH2D4AQ9H788 454 aa17.25■□□□□ 0.35
COPS7B-222ENST00000492423 GOPCQ9HD26 462 aa17.25■□□□□ 0.35
COPS7B-222ENST00000492423 FARP1Q9Y4F1 1045 aaPredicted RBP17.25■□□□□ 0.35
COPS7B-222ENST00000492423 V9GY48 417 aaPredicted RBP17.25■□□□□ 0.35
COPS7B-222ENST00000492423 TRAF5O00463 557 aa17.24■□□□□ 0.35
COPS7B-222ENST00000492423 NF2P35240 595 aa17.24■□□□□ 0.35
COPS7B-222ENST00000492423 SLC1A4P43007 532 aa17.24■□□□□ 0.35
COPS7B-222ENST00000492423 GUCY1B3Q02153 619 aa17.24■□□□□ 0.35
COPS7B-222ENST00000492423 FMR1Q06787 632 aaKnown RBP eCLIP17.24■□□□□ 0.35
COPS7B-222ENST00000492423 VGLL4Q14135 290 aa17.24■□□□□ 0.35
COPS7B-222ENST00000492423 KRT40Q6A162 431 aa17.24■□□□□ 0.35
COPS7B-222ENST00000492423 FBXO18Q8NFZ0 1043 aa17.24■□□□□ 0.35
COPS7B-222ENST00000492423 WASF1Q92558 559 aa17.24■□□□□ 0.35
COPS7B-222ENST00000492423 WDR18Q9BV38 432 aa17.24■□□□□ 0.35
COPS7B-222ENST00000492423 UBA5Q9GZZ9 404 aa17.24■□□□□ 0.35
COPS7B-222ENST00000492423 KIAA1683Q9H0B3 1180 aa17.24■□□□□ 0.35
COPS7B-222ENST00000492423 PICK1Q9NRD5 415 aa17.24■□□□□ 0.35
COPS7B-222ENST00000492423 RBM27Q9P2N5 1060 aaKnown RBP17.24■□□□□ 0.35
COPS7B-222ENST00000492423 H3BQV1 296 aa17.23■□□□□ 0.35
COPS7B-222ENST00000492423 RAD21O60216 631 aa17.23■□□□□ 0.35
COPS7B-222ENST00000492423 PPP1R12BO60237 982 aaPredicted RBP17.23■□□□□ 0.35
COPS7B-222ENST00000492423 IREB2P48200 963 aaKnown RBP17.23■□□□□ 0.35
COPS7B-222ENST00000492423 AKAP17AQ02040 695 aaKnown RBP17.23■□□□□ 0.35
COPS7B-222ENST00000492423 RESTQ13127 1097 aa17.23■□□□□ 0.35
COPS7B-222ENST00000492423 ZYXQ15942 572 aaKnown RBP17.23■□□□□ 0.35
COPS7B-222ENST00000492423 PFKFB3Q16875 520 aaPredicted RBP17.23■□□□□ 0.35
COPS7B-222ENST00000492423 IFFO2Q5TF58 517 aa17.23■□□□□ 0.35
COPS7B-222ENST00000492423 MOB2Q70IA6 237 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms