RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 PAXBP1Q9Y5B6 917 aa14.15□□□□□ -0.14
HMGN1-220ENST00000492280 MAST2Q6P0Q8 1798 aa14.15□□□□□ -0.14
HMGN1-220ENST00000492280 NAV1Q8NEY1 1877 aa14.15□□□□□ -0.14
HMGN1-220ENST00000492280 CBFA2T2O43439 604 aa14.15□□□□□ -0.14
HMGN1-220ENST00000492280 RASA1P20936 1047 aa14.15□□□□□ -0.14
HMGN1-220ENST00000492280 MFSD14BQ5SR56 506 aa14.15□□□□□ -0.14
HMGN1-220ENST00000492280 SEPT12Q8IYM1 358 aa14.15□□□□□ -0.14
HMGN1-220ENST00000492280 RASSF8Q8NHQ8 419 aa14.15□□□□□ -0.14
HMGN1-220ENST00000492280 CD209Q9NNX6 404 aa14.15□□□□□ -0.14
HMGN1-220ENST00000492280 POLLQ9UGP5 575 aa14.15□□□□□ -0.14
HMGN1-220ENST00000492280 MYH8P13535 1937 aa14.15□□□□□ -0.14
HMGN1-220ENST00000492280 NHSQ6T4R5 1651 aa14.15□□□□□ -0.14
HMGN1-220ENST00000492280 CDK5RAP2Q96SN8 1893 aa14.15□□□□□ -0.14
HMGN1-220ENST00000492280 C6orf229H3BNL8 230 aa14.14□□□□□ -0.15
HMGN1-220ENST00000492280 GYS1P13807 737 aa14.14□□□□□ -0.15
HMGN1-220ENST00000492280 SBK1Q52WX2 424 aa14.14□□□□□ -0.15
HMGN1-220ENST00000492280 ZNF804AQ7Z570 1209 aa14.14□□□□□ -0.15
HMGN1-220ENST00000492280 TEX11Q8IYF3 940 aa14.14□□□□□ -0.15
HMGN1-220ENST00000492280 BLIDQ8IZY5 108 aa14.14□□□□□ -0.15
HMGN1-220ENST00000492280 MLKLQ8NB16 471 aa14.14□□□□□ -0.15
HMGN1-220ENST00000492280 UIMC1Q96RL1 719 aa14.14□□□□□ -0.15
HMGN1-220ENST00000492280 MAP7D2Q96T17 732 aa14.14□□□□□ -0.15
HMGN1-220ENST00000492280 CCDC94Q9BW85 323 aaPredicted RBP14.14□□□□□ -0.15
HMGN1-220ENST00000492280 UBA5Q9GZZ9 404 aa14.14□□□□□ -0.15
HMGN1-220ENST00000492280 PPP2R5BQ15173 497 aa14.14□□□□□ -0.15
HMGN1-220ENST00000492280 ZNF444Q8N0Y2 327 aaPredicted RBP14.14□□□□□ -0.15
HMGN1-220ENST00000492280 TC2NQ8N9U0 490 aa14.14□□□□□ -0.15
HMGN1-220ENST00000492280 WDR66Q8TBY9 1149 aa14.14□□□□□ -0.15
HMGN1-220ENST00000492280 LRRC15Q8TF66 581 aa14.14□□□□□ -0.15
HMGN1-220ENST00000492280 IRX2Q9BZI1 471 aaPredicted RBP14.14□□□□□ -0.15
HMGN1-220ENST00000492280 AFF2P51816 1311 aa14.14□□□□□ -0.15
HMGN1-220ENST00000492280 FRMPD2Q68DX3 1309 aaPredicted RBP14.14□□□□□ -0.15
HMGN1-220ENST00000492280 TRIM49BA6NDI0 452 aa14.14□□□□□ -0.15
HMGN1-220ENST00000492280 SERPINB2P05120 415 aa14.14□□□□□ -0.15
HMGN1-220ENST00000492280 SPTY2D1Q68D10 685 aaPredicted RBP14.14□□□□□ -0.15
HMGN1-220ENST00000492280 SPATA20Q8TB22 786 aa14.14□□□□□ -0.15
HMGN1-220ENST00000492280 ENOX1Q8TC92 643 aaKnown RBP14.14□□□□□ -0.15
HMGN1-220ENST00000492280 SOWAHDA6NJG2 315 aa14.13□□□□□ -0.15
HMGN1-220ENST00000492280 IGSF3O75054 1194 aa14.13□□□□□ -0.15
HMGN1-220ENST00000492280 DDR1Q08345 913 aa14.13□□□□□ -0.15
HMGN1-220ENST00000492280 E2F4Q16254 413 aa14.13□□□□□ -0.15
HMGN1-220ENST00000492280 SH3RF1Q7Z6J0 888 aa14.13□□□□□ -0.15
HMGN1-220ENST00000492280 SNED1Q8TER0 1413 aa14.13□□□□□ -0.15
HMGN1-220ENST00000492280 ZNF831Q5JPB2 1677 aa14.13□□□□□ -0.15
HMGN1-220ENST00000492280 PPP1R3GB7ZBB8 358 aa14.13□□□□□ -0.15
HMGN1-220ENST00000492280 KIF5BP33176 963 aa14.13□□□□□ -0.15
HMGN1-220ENST00000492280 DHX8Q14562 1220 aaKnown RBP14.13□□□□□ -0.15
HMGN1-220ENST00000492280 ERCC6LQ2NKX8 1250 aa14.13□□□□□ -0.15
HMGN1-220ENST00000492280 RRAGBQ5VZM2 374 aa14.13□□□□□ -0.15
HMGN1-220ENST00000492280 SPECC1LQ69YQ0 1117 aa14.13□□□□□ -0.15
HMGN1-220ENST00000492280 APTXQ7Z2E3 356 aaKnown RBP14.13□□□□□ -0.15
HMGN1-220ENST00000492280 FERMT2Q96AC1 680 aa14.13□□□□□ -0.15
HMGN1-220ENST00000492280 EYA3Q99504 573 aa14.13□□□□□ -0.15
HMGN1-220ENST00000492280 NOL10Q9BSC4 688 aaKnown RBP14.13□□□□□ -0.15
HMGN1-220ENST00000492280 EPC1Q9H2F5 836 aa14.13□□□□□ -0.15
HMGN1-220ENST00000492280 FLT1P17948 1338 aa14.12□□□□□ -0.15
HMGN1-220ENST00000492280 CCDC194A0A1B0GVG4 234 aa14.12□□□□□ -0.15
HMGN1-220ENST00000492280 TRIM37O94972 964 aa14.12□□□□□ -0.15
HMGN1-220ENST00000492280 PCP11498 1178 aaKnown RBP14.12□□□□□ -0.15
HMGN1-220ENST00000492280 CDK8P49336 464 aa14.12□□□□□ -0.15
HMGN1-220ENST00000492280 GTF2IP78347 998 aa14.12□□□□□ -0.15
HMGN1-220ENST00000492280 PDXDC2PQ6P474 469 aa14.12□□□□□ -0.15
HMGN1-220ENST00000492280 LRRC47Q8N1G4 583 aaKnown RBP14.12□□□□□ -0.15
HMGN1-220ENST00000492280 BAG1Q99933 345 aaPredicted RBP14.12□□□□□ -0.15
HMGN1-220ENST00000492280 PCDHA6Q9UN73 950 aa14.12□□□□□ -0.15
HMGN1-220ENST00000492280 PCDHA8Q9Y5H6 950 aa14.12□□□□□ -0.15
HMGN1-220ENST00000492280 DDX60LQ5H9U9 1706 aaKnown RBP14.12□□□□□ -0.15
HMGN1-220ENST00000492280 KLRF2D3W0D1 207 aa14.12□□□□□ -0.15
HMGN1-220ENST00000492280 BAG3O95817 575 aa14.12□□□□□ -0.15
HMGN1-220ENST00000492280 HSPA1LP34931 641 aa14.12□□□□□ -0.15
HMGN1-220ENST00000492280 REXO1L1PQ8IX06 675 aa14.12□□□□□ -0.15
HMGN1-220ENST00000492280 ZBTB9Q96C00 473 aa14.12□□□□□ -0.15
HMGN1-220ENST00000492280 CEP95Q96GE4 821 aa14.12□□□□□ -0.15
HMGN1-220ENST00000492280 WDR24Q96S15 920 aa14.12□□□□□ -0.15
HMGN1-220ENST00000492280 VPS16Q9H269 839 aa14.12□□□□□ -0.15
HMGN1-220ENST00000492280 GGA1Q9UJY5 639 aa14.12□□□□□ -0.15
HMGN1-220ENST00000492280 LEMD3Q9Y2U8 911 aa14.12□□□□□ -0.15
HMGN1-220ENST00000492280 PDS5AQ29RF7 1337 aaKnown RBP14.11□□□□□ -0.15
HMGN1-220ENST00000492280 LY75O60449 1722 aa14.11□□□□□ -0.15
HMGN1-220ENST00000492280 NRDCO43847 1150 aa14.11□□□□□ -0.15
HMGN1-220ENST00000492280 SCNN1DP51172 638 aa14.11□□□□□ -0.15
HMGN1-220ENST00000492280 GRM4Q14833 912 aa14.11□□□□□ -0.15
HMGN1-220ENST00000492280 GLIPR1L2Q4G1C9 344 aa14.11□□□□□ -0.15
HMGN1-220ENST00000492280 TAB2Q9NYJ8 693 aa14.11□□□□□ -0.15
HMGN1-220ENST00000492280 PCDHA4Q9UN74 947 aa14.11□□□□□ -0.15
HMGN1-220ENST00000492280 PPP2R2CQ9Y2T4 447 aa14.11□□□□□ -0.15
HMGN1-220ENST00000492280 THSD7AQ9UPZ6 1657 aa14.11□□□□□ -0.15
HMGN1-220ENST00000492280 RBL2Q08999 1139 aa14.11□□□□□ -0.15
HMGN1-220ENST00000492280 TBX2Q13207 712 aaPredicted RBP14.11□□□□□ -0.15
HMGN1-220ENST00000492280 LETM2Q2VYF4 491 aa14.11□□□□□ -0.15
HMGN1-220ENST00000492280 KMT5BQ4FZB7 885 aa14.11□□□□□ -0.15
HMGN1-220ENST00000492280 KANK3Q6NY19 840 aa14.11□□□□□ -0.15
HMGN1-220ENST00000492280 TRIM65Q6PJ69 517 aa14.11□□□□□ -0.15
HMGN1-220ENST00000492280 C4orf32Q8N8J7 132 aa14.11□□□□□ -0.15
HMGN1-220ENST00000492280 DACH1Q9UI36 760 aa14.11□□□□□ -0.15
HMGN1-220ENST00000492280 PSDA5PKW4 1024 aaPredicted RBP14.1□□□□□ -0.15
HMGN1-220ENST00000492280 STXBP3O00186 592 aa14.1□□□□□ -0.15
HMGN1-220ENST00000492280 URI1O94763 535 aaPredicted RBP14.1□□□□□ -0.15
HMGN1-220ENST00000492280 STAT6P42226 847 aa14.1□□□□□ -0.15
HMGN1-220ENST00000492280 NAPAP54920 295 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms