RNA–Protein interactions for RNA: ENST00000492118.2

ATF3-209, Transcript of activating transcription factor 3, humanhuman

TSL 2

Gene ATF3, Length 2,103 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-209ENST00000492118 FBXL16Q8N461 479 aa12.51□□□□□ -0.41
ATF3-209ENST00000492118 HOOK2Q96ED9 719 aa12.51□□□□□ -0.41
ATF3-209ENST00000492118 AIFM3Q96NN9 605 aa12.51□□□□□ -0.41
ATF3-209ENST00000492118 SLC26A6Q9BXS9 759 aa12.51□□□□□ -0.41
ATF3-209ENST00000492118 F5H6K3 240 aa12.5□□□□□ -0.41
ATF3-209ENST00000492118 IREB2P48200 963 aaKnown RBP12.5□□□□□ -0.41
ATF3-209ENST00000492118 EVCP57679 992 aa12.5□□□□□ -0.41
ATF3-209ENST00000492118 SNAP25P60880 206 aa12.5□□□□□ -0.41
ATF3-209ENST00000492118 KLRC3Q07444 240 aa12.5□□□□□ -0.41
ATF3-209ENST00000492118 MTMR2Q13614 643 aa12.5□□□□□ -0.41
ATF3-209ENST00000492118 CUL4AQ13619 759 aa12.5□□□□□ -0.41
ATF3-209ENST00000492118 CCDC178Q5BJE1 867 aa12.5□□□□□ -0.41
ATF3-209ENST00000492118 SCYL3Q8IZE3 742 aa12.5□□□□□ -0.41
ATF3-209ENST00000492118 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.5□□□□□ -0.41
ATF3-209ENST00000492118 OTUD5Q96G74 571 aa12.5□□□□□ -0.41
ATF3-209ENST00000492118 ARHGEF10LQ9HCE6 1279 aa12.5□□□□□ -0.41
ATF3-209ENST00000492118 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.5□□□□□ -0.41
ATF3-209ENST00000492118 CSADQ9Y600 493 aa12.5□□□□□ -0.41
ATF3-209ENST00000492118 CEP350Q5VT06 3117 aa12.5□□□□□ -0.41
ATF3-209ENST00000492118 PLIN4Q96Q06 1357 aa12.5□□□□□ -0.41
ATF3-209ENST00000492118 PARP1P09874 1014 aaKnown RBP12.5□□□□□ -0.41
ATF3-209ENST00000492118 PDHBP11177 359 aa12.5□□□□□ -0.41
ATF3-209ENST00000492118 PTPRAP18433 802 aa12.5□□□□□ -0.41
ATF3-209ENST00000492118 SLC1A4P43007 532 aa12.5□□□□□ -0.41
ATF3-209ENST00000492118 MAP3K9P80192 1104 aa12.5□□□□□ -0.41
ATF3-209ENST00000492118 OTUD7BQ6GQQ9 843 aa12.5□□□□□ -0.41
ATF3-209ENST00000492118 HOMER1Q86YM7 354 aa12.5□□□□□ -0.41
ATF3-209ENST00000492118 NSUN7Q8NE18 718 aaKnown RBP12.5□□□□□ -0.41
ATF3-209ENST00000492118 MAD2L2Q9UI95 211 aa12.5□□□□□ -0.41
ATF3-209ENST00000492118 KLRF2D3W0D1 207 aa12.49□□□□□ -0.41
ATF3-209ENST00000492118 DDAH1O94760 285 aa12.49□□□□□ -0.41
ATF3-209ENST00000492118 NDUFB10O96000 172 aa12.49□□□□□ -0.41
ATF3-209ENST00000492118 SLFN13Q68D06 897 aa12.49□□□□□ -0.41
ATF3-209ENST00000492118 CHADLQ6NUI6 762 aa12.49□□□□□ -0.41
ATF3-209ENST00000492118 SRBD1Q8N5C6 995 aaKnown RBP12.49□□□□□ -0.41
ATF3-209ENST00000492118 NYAP2Q9P242 653 aa12.49□□□□□ -0.41
ATF3-209ENST00000492118 V9GY48 417 aaPredicted RBP12.49□□□□□ -0.41
ATF3-209ENST00000492118 HMGCS2P54868 508 aa12.49□□□□□ -0.41
ATF3-209ENST00000492118 GRM1Q13255 1194 aa12.49□□□□□ -0.41
ATF3-209ENST00000492118 FAM83BQ5T0W9 1011 aa12.49□□□□□ -0.41
ATF3-209ENST00000492118 FAM184AQ8NB25 1140 aa12.49□□□□□ -0.41
ATF3-209ENST00000492118 ANKS1AQ92625 1134 aa12.49□□□□□ -0.41
ATF3-209ENST00000492118 MTA3Q9BTC8 594 aa12.49□□□□□ -0.41
ATF3-209ENST00000492118 ORC3Q9UBD5 711 aaPredicted RBP12.49□□□□□ -0.41
ATF3-209ENST00000492118 ZNF112Q9UJU3 913 aa12.49□□□□□ -0.41
ATF3-209ENST00000492118 SNCAIPQ9Y6H5 919 aa12.49□□□□□ -0.41
ATF3-209ENST00000492118 GREB1LQ9C091 1923 aaPredicted RBP12.48□□□□□ -0.41
ATF3-209ENST00000492118 LOC102724159A0A0B4J2E5 919 aa12.48□□□□□ -0.41
ATF3-209ENST00000492118 VPS37CA5D8V6 355 aaPredicted RBP12.48□□□□□ -0.41
ATF3-209ENST00000492118 PWP2Q15269 919 aaKnown RBP12.48□□□□□ -0.41
ATF3-209ENST00000492118 CST9Q5W186 159 aa12.48□□□□□ -0.41
ATF3-209ENST00000492118 ARMC9Q7Z3E5 817 aa12.48□□□□□ -0.41
ATF3-209ENST00000492118 TMEM232C9JQI7 657 aa12.47□□□□□ -0.41
ATF3-209ENST00000492118 KIF3CO14782 793 aa12.47□□□□□ -0.41
ATF3-209ENST00000492118 ITGBL1O95965 494 aaPredicted RBP12.47□□□□□ -0.41
ATF3-209ENST00000492118 CALM1P0DP23 149 aa12.47□□□□□ -0.41
ATF3-209ENST00000492118 CALM2P0DP24 149 aa12.47□□□□□ -0.41
ATF3-209ENST00000492118 CALM3P0DP25 149 aa12.47□□□□□ -0.41
ATF3-209ENST00000492118 FDPSP14324 419 aaKnown RBP12.47□□□□□ -0.41
ATF3-209ENST00000492118 KIF5BP33176 963 aa12.47□□□□□ -0.41
ATF3-209ENST00000492118 GRM4Q14833 912 aa12.47□□□□□ -0.41
ATF3-209ENST00000492118 NTRK3Q16288 839 aa12.47□□□□□ -0.41
ATF3-209ENST00000492118 SLC35G1Q2M3R5 365 aa12.47□□□□□ -0.41
ATF3-209ENST00000492118 CHAMP1Q96JM3 812 aa12.47□□□□□ -0.41
ATF3-209ENST00000492118 GBA2Q9HCG7 927 aaPredicted RBP12.47□□□□□ -0.41
ATF3-209ENST00000492118 OTOFQ9HC10 1997 aa12.47□□□□□ -0.41
ATF3-209ENST00000492118 CCDC196A0A1B0GTZ2 297 aa12.47□□□□□ -0.41
ATF3-209ENST00000492118 TAL1P17542 331 aaPredicted RBP12.47□□□□□ -0.41
ATF3-209ENST00000492118 SSRP1Q08945 709 aaKnown RBP12.47□□□□□ -0.41
ATF3-209ENST00000492118 LARP1BQ659C4 914 aaKnown RBP12.47□□□□□ -0.41
ATF3-209ENST00000492118 CPLX2Q6PUV4 134 aaKnown RBP12.47□□□□□ -0.41
ATF3-209ENST00000492118 TMTC3Q6ZXV5 915 aa12.47□□□□□ -0.41
ATF3-209ENST00000492118 ZNF280CQ8ND82 737 aa12.47□□□□□ -0.41
ATF3-209ENST00000492118 GPKOWQ92917 476 aaPredicted RBP eCLIP12.47□□□□□ -0.418e-6■■□□□ 13.6
ATF3-209ENST00000492118 INTS4Q96HW7 963 aaKnown RBP12.47□□□□□ -0.41
ATF3-209ENST00000492118 GOPCQ9HD26 462 aa12.47□□□□□ -0.41
ATF3-209ENST00000492118 FBXO28Q9NVF7 368 aa12.47□□□□□ -0.41
ATF3-209ENST00000492118 TMX2Q9Y320 296 aa12.47□□□□□ -0.41
ATF3-209ENST00000492118 DOCK1Q14185 1865 aa12.46□□□□□ -0.41
ATF3-209ENST00000492118 USP17L10C9JJH3 530 aa12.46□□□□□ -0.41
ATF3-209ENST00000492118 IRF6O14896 467 aa12.46□□□□□ -0.41
ATF3-209ENST00000492118 CYTH3O43739 400 aa12.46□□□□□ -0.41
ATF3-209ENST00000492118 NOVP48745 357 aa12.46□□□□□ -0.41
ATF3-209ENST00000492118 AKAP17AQ02040 695 aaKnown RBP12.46□□□□□ -0.41
ATF3-209ENST00000492118 FERMT3Q86UX7 667 aa12.46□□□□□ -0.41
ATF3-209ENST00000492118 ANKRD13AQ8IZ07 590 aa12.46□□□□□ -0.41
ATF3-209ENST00000492118 ZNF784Q8NCA9 323 aaPredicted RBP12.46□□□□□ -0.41
ATF3-209ENST00000492118 OPTNQ96CV9 577 aa12.46□□□□□ -0.41
ATF3-209ENST00000492118 SLC10A4Q96EP9 437 aa12.46□□□□□ -0.41
ATF3-209ENST00000492118 TANGO6Q9C0B7 1094 aa12.46□□□□□ -0.41
ATF3-209ENST00000492118 SYT1P21579 422 aa12.46□□□□□ -0.42
ATF3-209ENST00000492118 ZNF543Q08ER8 600 aa12.46□□□□□ -0.42
ATF3-209ENST00000492118 TRIM22Q8IYM9 498 aa12.46□□□□□ -0.42
ATF3-209ENST00000492118 C2orf69Q8N8R5 385 aa12.46□□□□□ -0.42
ATF3-209ENST00000492118 MKL1Q969V6 931 aa12.46□□□□□ -0.42
ATF3-209ENST00000492118 KIFC2Q96AC6 838 aa12.46□□□□□ -0.42
ATF3-209ENST00000492118 RBM28Q9NW13 759 aaKnown RBP12.46□□□□□ -0.42
ATF3-209ENST00000492118 PALM3A6NDB9 673 aaPredicted RBP12.45□□□□□ -0.42
ATF3-209ENST00000492118 CDKL5O76039 1030 aa12.45□□□□□ -0.42
ATF3-209ENST00000492118 BMP3P12645 472 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms