RNA–Protein interactions for RNA: ENST00000491421.5

LSM2-213, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 820 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-213ENST00000491421 ZNF444Q8N0Y2 327 aaPredicted RBP9.85□□□□□ -0.83
LSM2-213ENST00000491421 NPLOC4Q8TAT6 608 aa9.85□□□□□ -0.83
LSM2-213ENST00000491421 EVI5LQ96CN4 794 aa9.85□□□□□ -0.83
LSM2-213ENST00000491421 NBPF3Q9H094 633 aa9.85□□□□□ -0.83
LSM2-213ENST00000491421 NAPBQ9H115 298 aa9.85□□□□□ -0.83
LSM2-213ENST00000491421 MROH8Q9H579 483 aa9.85□□□□□ -0.83
LSM2-213ENST00000491421 C11orf49Q9H6J7 331 aa9.85□□□□□ -0.83
LSM2-213ENST00000491421 FBXO28Q9NVF7 368 aa9.85□□□□□ -0.83
LSM2-213ENST00000491421 NYAP2Q9P242 653 aa9.85□□□□□ -0.83
LSM2-213ENST00000491421 STAP2Q9UGK3 403 aa9.85□□□□□ -0.83
LSM2-213ENST00000491421 MYH7P12883 1935 aa9.84□□□□□ -0.83
LSM2-213ENST00000491421 BAZ2AQ9UIF9 1905 aaKnown RBP9.84□□□□□ -0.83
LSM2-213ENST00000491421 VWA5AO00534 786 aa9.84□□□□□ -0.83
LSM2-213ENST00000491421 SLC25A27O95847 323 aa9.84□□□□□ -0.83
LSM2-213ENST00000491421 TSPY3P0CV98 308 aa9.84□□□□□ -0.83
LSM2-213ENST00000491421 TSPY8P0CW00 308 aa9.84□□□□□ -0.83
LSM2-213ENST00000491421 FCER1AP12319 257 aa9.84□□□□□ -0.83
LSM2-213ENST00000491421 CNGA1P29973 690 aa9.84□□□□□ -0.83
LSM2-213ENST00000491421 CYP2C19P33261 490 aa9.84□□□□□ -0.83
LSM2-213ENST00000491421 MNX1P50219 401 aaPredicted RBP9.84□□□□□ -0.83
LSM2-213ENST00000491421 PDE1AP54750 535 aa9.84□□□□□ -0.83
LSM2-213ENST00000491421 PDE4BQ07343 736 aa9.84□□□□□ -0.83
LSM2-213ENST00000491421 PPARAQ07869 468 aa9.84□□□□□ -0.83
LSM2-213ENST00000491421 TMEM132BQ14DG7 1078 aa9.84□□□□□ -0.83
LSM2-213ENST00000491421 CCDC129Q6ZRS4 1044 aa9.84□□□□□ -0.83
LSM2-213ENST00000491421 ABRAQ8N0Z2 381 aa9.84□□□□□ -0.83
LSM2-213ENST00000491421 NUP88Q99567 741 aaPredicted RBP9.84□□□□□ -0.83
LSM2-213ENST00000491421 RWDD1Q9H446 243 aaPredicted RBP9.84□□□□□ -0.83
LSM2-213ENST00000491421 SLC5A4Q9NY91 659 aa9.84□□□□□ -0.83
LSM2-213ENST00000491421 CLIP2Q9UDT6 1046 aa9.84□□□□□ -0.83
LSM2-213ENST00000491421 PPP1R9AQ9ULJ8 1098 aa9.84□□□□□ -0.83
LSM2-213ENST00000491421 ADAMTS5Q9UNA0 930 aa9.84□□□□□ -0.83
LSM2-213ENST00000491421 CEP290O15078 2479 aa9.83□□□□□ -0.84
LSM2-213ENST00000491421 IGKV6D-41A0A0C4DH26 115 aa9.83□□□□□ -0.84
LSM2-213ENST00000491421 F5H6K3 240 aa9.83□□□□□ -0.84
LSM2-213ENST00000491421 MSCO60682 206 aa9.83□□□□□ -0.84
LSM2-213ENST00000491421 COBLO75128 1261 aa9.83□□□□□ -0.84
LSM2-213ENST00000491421 TTLL1O95922 423 aa9.83□□□□□ -0.84
LSM2-213ENST00000491421 NDUFB10O96000 172 aa9.83□□□□□ -0.84
LSM2-213ENST00000491421 KLRC3Q07444 240 aa9.83□□□□□ -0.84
LSM2-213ENST00000491421 OLFML2BQ68BL8 750 aa9.83□□□□□ -0.84
LSM2-213ENST00000491421 LHX8Q68G74 356 aa9.83□□□□□ -0.84
LSM2-213ENST00000491421 RIOX2Q8IUF8 465 aa9.83□□□□□ -0.84
LSM2-213ENST00000491421 C7orf61Q8IZ16 206 aa9.83□□□□□ -0.84
LSM2-213ENST00000491421 CEP95Q96GE4 821 aa9.83□□□□□ -0.84
LSM2-213ENST00000491421 SLF1Q9BQI6 1058 aa9.83□□□□□ -0.84
LSM2-213ENST00000491421 LNPKQ9C0E8 428 aa9.83□□□□□ -0.84
LSM2-213ENST00000491421 MTMR4Q9NYA4 1195 aa9.83□□□□□ -0.84
LSM2-213ENST00000491421 DDX20Q9UHI6 824 aaKnown RBP9.83□□□□□ -0.84
LSM2-213ENST00000491421 SYNPO2Q9UMS6 1093 aa9.83□□□□□ -0.84
LSM2-213ENST00000491421 DOCK3Q8IZD9 2030 aa9.83□□□□□ -0.84
LSM2-213ENST00000491421 RANBP2P49792 3224 aaKnown RBP9.82□□□□□ -0.84
LSM2-213ENST00000491421 A0A0G2JMZ2 1700 aa9.82□□□□□ -0.84
LSM2-213ENST00000491421 FOXP2O15409 715 aa9.82□□□□□ -0.84
LSM2-213ENST00000491421 IGHA2P01877 340 aa9.82□□□□□ -0.84
LSM2-213ENST00000491421 CYBAP13498 195 aa9.82□□□□□ -0.84
LSM2-213ENST00000491421 COPB2P35606 906 aa9.82□□□□□ -0.84
LSM2-213ENST00000491421 STAT3P40763 770 aa9.82□□□□□ -0.84
LSM2-213ENST00000491421 FXR1P51114 621 aaKnown RBP eCLIP9.82□□□□□ -0.84
LSM2-213ENST00000491421 TFAP4Q01664 338 aa9.82□□□□□ -0.84
LSM2-213ENST00000491421 KCTD2Q14681 263 aa9.82□□□□□ -0.84
LSM2-213ENST00000491421 FAM47AQ5JRC9 791 aa9.82□□□□□ -0.84
LSM2-213ENST00000491421 B4GALNT3Q6L9W6 998 aa9.82□□□□□ -0.84
LSM2-213ENST00000491421 LRRC47Q8N1G4 583 aaKnown RBP9.82□□□□□ -0.84
LSM2-213ENST00000491421 TRPV1Q8NER1 839 aa9.82□□□□□ -0.84
LSM2-213ENST00000491421 NEDD1Q8NHV4 660 aa9.82□□□□□ -0.84
LSM2-213ENST00000491421 MKL1Q969V6 931 aa9.82□□□□□ -0.84
LSM2-213ENST00000491421 MMP19Q99542 508 aa9.82□□□□□ -0.84
LSM2-213ENST00000491421 HELLSQ9NRZ9 838 aa9.82□□□□□ -0.84
LSM2-213ENST00000491421 RBM27Q9P2N5 1060 aaKnown RBP9.82□□□□□ -0.84
LSM2-213ENST00000491421 ZNF214Q9UL59 606 aaPredicted RBP9.82□□□□□ -0.84
LSM2-213ENST00000491421 CTDP1Q9Y5B0 961 aaPredicted RBP9.82□□□□□ -0.84
LSM2-213ENST00000491421 GTF3C3Q9Y5Q9 886 aa9.82□□□□□ -0.84
LSM2-213ENST00000491421 PLIN4Q96Q06 1357 aa9.82□□□□□ -0.84
LSM2-213ENST00000491421 PFASO15067 1338 aa9.82□□□□□ -0.84
LSM2-213ENST00000491421 TRIM6-TRIM34B2RNG4 842 aa9.81□□□□□ -0.84
LSM2-213ENST00000491421 PGK2P07205 417 aa9.81□□□□□ -0.84
LSM2-213ENST00000491421 COL6A1P12109 1028 aa9.81□□□□□ -0.84
LSM2-213ENST00000491421 CTDSPL2Q05D32 466 aa9.81□□□□□ -0.84
LSM2-213ENST00000491421 PPP4R3BQ5MIZ7 849 aa9.81□□□□□ -0.84
LSM2-213ENST00000491421 VPS53Q5VIR6 699 aa9.81□□□□□ -0.84
LSM2-213ENST00000491421 SNRNP48Q6IEG0 339 aaKnown RBP9.81□□□□□ -0.84
LSM2-213ENST00000491421 CHD1LQ86WJ1 897 aa9.81□□□□□ -0.84
LSM2-213ENST00000491421 TICAM2Q86XR7 235 aa9.81□□□□□ -0.84
LSM2-213ENST00000491421 SMC5Q8IY18 1101 aa9.81□□□□□ -0.84
LSM2-213ENST00000491421 PRPF38AQ8NAV1 312 aaKnown RBP9.81□□□□□ -0.84
LSM2-213ENST00000491421 GMCL1P1Q8NEA9 526 aa9.81□□□□□ -0.84
LSM2-213ENST00000491421 REPS2Q8NFH8 660 aa9.81□□□□□ -0.84
LSM2-213ENST00000491421 EXOC6Q8TAG9 804 aa9.81□□□□□ -0.84
LSM2-213ENST00000491421 KIFC2Q96AC6 838 aa9.81□□□□□ -0.84
LSM2-213ENST00000491421 MAML3Q96JK9 1138 aa9.81□□□□□ -0.84
LSM2-213ENST00000491421 FAM227BQ96M60 508 aa9.81□□□□□ -0.84
LSM2-213ENST00000491421 TEX13BQ9BXU2 312 aa9.81□□□□□ -0.84
LSM2-213ENST00000491421 FEM1BQ9UK73 627 aa9.81□□□□□ -0.84
LSM2-213ENST00000491421 ISY1Q9ULR0 285 aaKnown RBP9.81□□□□□ -0.84
LSM2-213ENST00000491421 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.81□□□□□ -0.84
LSM2-213ENST00000491421 MYH8P13535 1937 aa9.8□□□□□ -0.84
LSM2-213ENST00000491421 ZNF236Q9UL36 1845 aa9.8□□□□□ -0.84
LSM2-213ENST00000491421 A0A0D9SFI3 127 aa9.8□□□□□ -0.84
LSM2-213ENST00000491421 TSPY2A6NKD2 308 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms