RNA–Protein interactions for RNA: ENST00000490833.5

FN1-223, Transcript of fibronectin 1, humanhuman

TSL 3

Gene FN1, Length 699 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-223ENST00000490833 ANKIB1Q9P2G1 1089 aa7.22□□□□□ -1.25
FN1-223ENST00000490833 TSKSQ9UJT2 592 aa7.22□□□□□ -1.25
FN1-223ENST00000490833 COL16A1Q07092 1604 aaPredicted RBP7.22□□□□□ -1.25
FN1-223ENST00000490833 TIAM2Q8IVF5 1701 aa7.21□□□□□ -1.25
FN1-223ENST00000490833 GRXCR2A6NFK2 248 aa7.21□□□□□ -1.26
FN1-223ENST00000490833 NUTM2BA6NNL0 878 aaPredicted RBP7.21□□□□□ -1.26
FN1-223ENST00000490833 NUTM2EB1AL46 878 aaPredicted RBP7.21□□□□□ -1.26
FN1-223ENST00000490833 BTBD18B2RXH4 712 aa7.21□□□□□ -1.26
FN1-223ENST00000490833 USP17L12C9JPN9 530 aa7.21□□□□□ -1.26
FN1-223ENST00000490833 USP17L21D6R901 530 aa7.21□□□□□ -1.26
FN1-223ENST00000490833 GNPATO15228 680 aa7.21□□□□□ -1.26
FN1-223ENST00000490833 ARHGAP6O43182 974 aa7.21□□□□□ -1.26
FN1-223ENST00000490833 STX10O60499 249 aa7.21□□□□□ -1.26
FN1-223ENST00000490833 TUBBP07437 444 aa7.21□□□□□ -1.26
FN1-223ENST00000490833 TOP1P11387 765 aaKnown RBP7.21□□□□□ -1.26
FN1-223ENST00000490833 SCG2P13521 617 aa7.21□□□□□ -1.26
FN1-223ENST00000490833 PRPHP41219 470 aa7.21□□□□□ -1.26
FN1-223ENST00000490833 NLRP5P59047 1200 aa7.21□□□□□ -1.26
FN1-223ENST00000490833 FAM193AP78312 1265 aa7.21□□□□□ -1.26
FN1-223ENST00000490833 MECOMQ03112 1051 aa7.21□□□□□ -1.26
FN1-223ENST00000490833 TROAPQ12815 778 aa7.21□□□□□ -1.26
FN1-223ENST00000490833 PFKFB3Q16875 520 aaPredicted RBP7.21□□□□□ -1.26
FN1-223ENST00000490833 TMTC3Q6ZXV5 915 aa7.21□□□□□ -1.26
FN1-223ENST00000490833 AOPEPQ8N6M6 819 aa7.21□□□□□ -1.26
FN1-223ENST00000490833 ENAHQ8N8S7 591 aaPredicted RBP7.21□□□□□ -1.26
FN1-223ENST00000490833 CNBD1Q8NA66 436 aa7.21□□□□□ -1.26
FN1-223ENST00000490833 DAGLBQ8NCG7 672 aa7.21□□□□□ -1.26
FN1-223ENST00000490833 SPATA20Q8TB22 786 aa7.21□□□□□ -1.26
FN1-223ENST00000490833 NOC3LQ8WTT2 800 aaKnown RBP7.21□□□□□ -1.26
FN1-223ENST00000490833 PHKBQ93100 1093 aa7.21□□□□□ -1.26
FN1-223ENST00000490833 CRAMP1Q96RY5 1269 aa7.21□□□□□ -1.26
FN1-223ENST00000490833 MRIQ9BWK5 157 aa7.21□□□□□ -1.26
FN1-223ENST00000490833 GOLPH3LQ9H4A5 285 aa7.21□□□□□ -1.26
FN1-223ENST00000490833 DCP1AQ9NPI6 582 aaPredicted RBP7.21□□□□□ -1.26
FN1-223ENST00000490833 PODXL2Q9NZ53 605 aa7.21□□□□□ -1.26
FN1-223ENST00000490833 USP21Q9UK80 565 aa7.21□□□□□ -1.26
FN1-223ENST00000490833 TRPC5Q9UL62 973 aaPredicted RBP7.21□□□□□ -1.26
FN1-223ENST00000490833 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.21□□□□□ -1.26
FN1-223ENST00000490833 LAMA4Q16363 1823 aa7.21□□□□□ -1.26
FN1-223ENST00000490833 NRAPQ86VF7 1730 aa7.21□□□□□ -1.26
FN1-223ENST00000490833 DOT1LQ8TEK3 1739 aa7.21□□□□□ -1.26
FN1-223ENST00000490833 DOCK2Q92608 1830 aa7.2□□□□□ -1.26
FN1-223ENST00000490833 LTBP4Q8N2S1 1624 aa7.2□□□□□ -1.26
FN1-223ENST00000490833 SPDYE16A6NNV3 312 aaPredicted RBP7.2□□□□□ -1.26
FN1-223ENST00000490833 FAM177BA6PVY3 158 aa7.2□□□□□ -1.26
FN1-223ENST00000490833 FGFR1OPO95684 399 aaKnown RBP7.2□□□□□ -1.26
FN1-223ENST00000490833 CHGBP05060 677 aa7.2□□□□□ -1.26
FN1-223ENST00000490833 TNNT1P13805 278 aa7.2□□□□□ -1.26
FN1-223ENST00000490833 PTGS1P23219 599 aa7.2□□□□□ -1.26
FN1-223ENST00000490833 MARCKSP29966 332 aaPredicted RBP7.2□□□□□ -1.26
FN1-223ENST00000490833 ALDH1B1P30837 517 aa7.2□□□□□ -1.26
FN1-223ENST00000490833 HOXA10P31260 410 aaPredicted RBP7.2□□□□□ -1.26
FN1-223ENST00000490833 GYG1P46976 350 aa7.2□□□□□ -1.26
FN1-223ENST00000490833 SARSP49591 514 aaKnown RBP7.2□□□□□ -1.26
FN1-223ENST00000490833 FANCCQ00597 558 aa7.2□□□□□ -1.26
FN1-223ENST00000490833 CFAP100Q494V2 611 aa7.2□□□□□ -1.26
FN1-223ENST00000490833 TPRNQ4KMQ1 711 aa7.2□□□□□ -1.26
FN1-223ENST00000490833 C12orf60Q5U649 245 aa7.2□□□□□ -1.26
FN1-223ENST00000490833 CEP135Q66GS9 1140 aa7.2□□□□□ -1.26
FN1-223ENST00000490833 TBC1D9BQ66K14 1250 aa7.2□□□□□ -1.26
FN1-223ENST00000490833 SHC4Q6S5L8 630 aa7.2□□□□□ -1.26
FN1-223ENST00000490833 FAM196AQ6ZSG2 479 aa7.2□□□□□ -1.26
FN1-223ENST00000490833 SAMD7Q7Z3H4 446 aa7.2□□□□□ -1.26
FN1-223ENST00000490833 TXLNBQ8N3L3 684 aa7.2□□□□□ -1.26
FN1-223ENST00000490833 KCTD17Q8N5Z5 321 aa7.2□□□□□ -1.26
FN1-223ENST00000490833 MIGA1Q8NAN2 632 aa7.2□□□□□ -1.26
FN1-223ENST00000490833 LINC00116Q8NCU8 138 aa7.2□□□□□ -1.26
FN1-223ENST00000490833 ARHGEF1Q92888 912 aaKnown RBP7.2□□□□□ -1.26
FN1-223ENST00000490833 CABP5Q9NP86 173 aa7.2□□□□□ -1.26
FN1-223ENST00000490833 WDR70Q9NW82 654 aa7.2□□□□□ -1.26
FN1-223ENST00000490833 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.2□□□□□ -1.26
FN1-223ENST00000490833 CGNQ9P2M7 1197 aaKnown RBP7.2□□□□□ -1.26
FN1-223ENST00000490833 SEC63Q9UGP8 760 aaKnown RBP7.2□□□□□ -1.26
FN1-223ENST00000490833 SWAP70Q9UH65 585 aa7.2□□□□□ -1.26
FN1-223ENST00000490833 GGA1Q9UJY5 639 aa7.2□□□□□ -1.26
FN1-223ENST00000490833 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.2□□□□□ -1.26
FN1-223ENST00000490833 V9GY48 417 aaPredicted RBP7.2□□□□□ -1.26
FN1-223ENST00000490833 MYO3BQ8WXR4 1341 aa7.2□□□□□ -1.26
FN1-223ENST00000490833 ROBO3Q96MS0 1386 aa7.2□□□□□ -1.26
FN1-223ENST00000490833 CCDC194A0A1B0GVG4 234 aa7.19□□□□□ -1.26
FN1-223ENST00000490833 H7C1D1 291 aa7.19□□□□□ -1.26
FN1-223ENST00000490833 POLR2DO15514 142 aaKnown RBP7.19□□□□□ -1.26
FN1-223ENST00000490833 CTIFO43310 598 aaKnown RBP7.19□□□□□ -1.26
FN1-223ENST00000490833 WDHD1O75717 1129 aaPredicted RBP7.19□□□□□ -1.26
FN1-223ENST00000490833 TSPY3P0CV98 308 aa7.19□□□□□ -1.26
FN1-223ENST00000490833 TSPY8P0CW00 308 aa7.19□□□□□ -1.26
FN1-223ENST00000490833 IL1R1P14778 569 aa7.19□□□□□ -1.26
FN1-223ENST00000490833 ATP2C1P98194 919 aaPredicted RBP7.19□□□□□ -1.26
FN1-223ENST00000490833 MDM2Q00987 491 aaPredicted RBP7.19□□□□□ -1.26
FN1-223ENST00000490833 SLFNL1Q499Z3 407 aa7.19□□□□□ -1.26
FN1-223ENST00000490833 TTC38Q5R3I4 469 aa7.19□□□□□ -1.26
FN1-223ENST00000490833 SOGA3Q5TF21 947 aa7.19□□□□□ -1.26
FN1-223ENST00000490833 SPATA1Q5VX52 437 aa7.19□□□□□ -1.26
FN1-223ENST00000490833 SPECC1LQ69YQ0 1117 aa7.19□□□□□ -1.26
FN1-223ENST00000490833 DTHD1Q6ZMT9 781 aa7.19□□□□□ -1.26
FN1-223ENST00000490833 KRT25Q7Z3Z0 450 aa7.19□□□□□ -1.26
FN1-223ENST00000490833 FILIP1Q7Z7B0 1213 aa7.19□□□□□ -1.26
FN1-223ENST00000490833 PPFIBP1Q86W92 1011 aa7.19□□□□□ -1.26
FN1-223ENST00000490833 CNGA4Q8IV77 575 aa7.19□□□□□ -1.26
FN1-223ENST00000490833 FAM114A1Q8IWE2 563 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 228.8 ms