RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 PGK2P07205 417 aa16.84■□□□□ 0.29
EXOSC3-207ENST00000490516 ZNF865P0CJ78 1059 aaPredicted RBP16.84■□□□□ 0.29
EXOSC3-207ENST00000490516 AKR1A1P14550 325 aa16.84■□□□□ 0.29
EXOSC3-207ENST00000490516 PLCG2P16885 1265 aa16.84■□□□□ 0.29
EXOSC3-207ENST00000490516 CYP2C18P33260 490 aa16.84■□□□□ 0.29
EXOSC3-207ENST00000490516 CDK7P50613 346 aa16.84■□□□□ 0.29
EXOSC3-207ENST00000490516 PPP4CP60510 307 aa16.84■□□□□ 0.29
EXOSC3-207ENST00000490516 KRT40Q6A162 431 aa16.84■□□□□ 0.29
EXOSC3-207ENST00000490516 CCSAPQ6IQ19 270 aaPredicted RBP16.84■□□□□ 0.29
EXOSC3-207ENST00000490516 NAA16Q6N069 864 aaPredicted RBP16.84■□□□□ 0.29
EXOSC3-207ENST00000490516 OTOP2Q7RTS6 562 aa16.84■□□□□ 0.29
EXOSC3-207ENST00000490516 NEUROD6Q96NK8 337 aa16.84■□□□□ 0.29
EXOSC3-207ENST00000490516 MROH8Q9H579 483 aa16.84■□□□□ 0.29
EXOSC3-207ENST00000490516 COPRSQ9NQ92 184 aa16.84■□□□□ 0.29
EXOSC3-207ENST00000490516 HOXC10Q9NYD6 342 aa16.84■□□□□ 0.29
EXOSC3-207ENST00000490516 ROBO3Q96MS0 1386 aa16.84■□□□□ 0.29
EXOSC3-207ENST00000490516 MYADML2A6NDP7 307 aa16.83■□□□□ 0.28
EXOSC3-207ENST00000490516 MOXD2PA6NHM9 499 aa16.83■□□□□ 0.28
EXOSC3-207ENST00000490516 PTPRCP08575 1304 aa16.83■□□□□ 0.28
EXOSC3-207ENST00000490516 FCER1AP12319 257 aa16.83■□□□□ 0.28
EXOSC3-207ENST00000490516 MCAMP43121 646 aa16.83■□□□□ 0.28
EXOSC3-207ENST00000490516 IRX5P78411 483 aaPredicted RBP16.83■□□□□ 0.28
EXOSC3-207ENST00000490516 ABCB5Q2M3G0 1257 aa16.83■□□□□ 0.28
EXOSC3-207ENST00000490516 MROH7Q68CQ1 1323 aa16.83■□□□□ 0.28
EXOSC3-207ENST00000490516 ATF7IPQ6VMQ6 1270 aa16.83■□□□□ 0.28
EXOSC3-207ENST00000490516 KLHDC9Q8NEP7 349 aa16.83■□□□□ 0.28
EXOSC3-207ENST00000490516 TINF2Q9BSI4 451 aa16.83■□□□□ 0.28
EXOSC3-207ENST00000490516 TANGO6Q9C0B7 1094 aa16.83■□□□□ 0.28
EXOSC3-207ENST00000490516 COG5Q9UP83 839 aa16.83■□□□□ 0.28
EXOSC3-207ENST00000490516 AKAP2Q9Y2D5 859 aa16.83■□□□□ 0.28
EXOSC3-207ENST00000490516 PRR33A8MZF0 331 aa16.82■□□□□ 0.28
EXOSC3-207ENST00000490516 UBTFL1P0CB47 393 aaPredicted RBP16.82■□□□□ 0.28
EXOSC3-207ENST00000490516 ARID4AP29374 1257 aaPredicted RBP16.82■□□□□ 0.28
EXOSC3-207ENST00000490516 NHLH1Q02575 133 aa16.82■□□□□ 0.28
EXOSC3-207ENST00000490516 MTIF3Q9H2K0 278 aaKnown RBP16.82■□□□□ 0.28
EXOSC3-207ENST00000490516 CERS4Q9HA82 394 aa16.82■□□□□ 0.28
EXOSC3-207ENST00000490516 GTPBP6O43824 516 aaPredicted RBP16.81■□□□□ 0.28
EXOSC3-207ENST00000490516 POU3F3P20264 500 aaPredicted RBP16.81■□□□□ 0.28
EXOSC3-207ENST00000490516 GUCY1A2P33402 732 aa16.81■□□□□ 0.28
EXOSC3-207ENST00000490516 DYNLL1P63167 89 aaKnown RBP16.81■□□□□ 0.28
EXOSC3-207ENST00000490516 CERKLQ49MI3 558 aaPredicted RBP16.81■□□□□ 0.28
EXOSC3-207ENST00000490516 GORABQ5T7V8 394 aa16.81■□□□□ 0.28
EXOSC3-207ENST00000490516 FAM126BQ8IXS8 530 aa16.81■□□□□ 0.28
EXOSC3-207ENST00000490516 VTI1AQ96AJ9 217 aa16.81■□□□□ 0.28
EXOSC3-207ENST00000490516 GLT1D1Q96MS3 346 aa16.81■□□□□ 0.28
EXOSC3-207ENST00000490516 PCDHA11Q9Y5I1 949 aa16.81■□□□□ 0.28
EXOSC3-207ENST00000490516 WDFY4Q6ZS81 3184 aa16.81■□□□□ 0.28
EXOSC3-207ENST00000490516 ELP1O95163 1332 aa16.8■□□□□ 0.28
EXOSC3-207ENST00000490516 UMODL1Q5DID0 1318 aa16.8■□□□□ 0.28
EXOSC3-207ENST00000490516 A0A1W2PRG0 241 aa16.8■□□□□ 0.28
EXOSC3-207ENST00000490516 EPOPA6NHQ4 379 aa16.8■□□□□ 0.28
EXOSC3-207ENST00000490516 ARVCFO00192 962 aa16.8■□□□□ 0.28
EXOSC3-207ENST00000490516 ZNF792Q3KQV3 632 aa16.8■□□□□ 0.28
EXOSC3-207ENST00000490516 HLA-CQ95604 372 aa16.8■□□□□ 0.28
EXOSC3-207ENST00000490516 ATG4CQ96DT6 458 aa16.8■□□□□ 0.28
EXOSC3-207ENST00000490516 UIMC1Q96RL1 719 aa16.8■□□□□ 0.28
EXOSC3-207ENST00000490516 MMP19Q99542 508 aa16.8■□□□□ 0.28
EXOSC3-207ENST00000490516 SNRKQ9NRH2 765 aa16.8■□□□□ 0.28
EXOSC3-207ENST00000490516 SERPINB13Q9UIV8 391 aa16.8■□□□□ 0.28
EXOSC3-207ENST00000490516 ASGR1P07306 291 aa16.79■□□□□ 0.28
EXOSC3-207ENST00000490516 DSG3P32926 999 aa16.79■□□□□ 0.28
EXOSC3-207ENST00000490516 SEPT2Q15019 361 aa16.79■□□□□ 0.28
EXOSC3-207ENST00000490516 KIAA1755Q5JYT7 1200 aa16.79■□□□□ 0.28
EXOSC3-207ENST00000490516 SAMD1Q6SPF0 538 aaPredicted RBP16.79■□□□□ 0.28
EXOSC3-207ENST00000490516 MB21D1Q8N884 522 aa16.79■□□□□ 0.28
EXOSC3-207ENST00000490516 CABP5Q9NP86 173 aa16.79■□□□□ 0.28
EXOSC3-207ENST00000490516 CNPY2Q9Y2B0 182 aa16.79■□□□□ 0.28
EXOSC3-207ENST00000490516 SLC4A7Q9Y6M7 1214 aa16.79■□□□□ 0.28
EXOSC3-207ENST00000490516 BRWD1Q9NSI6 2320 aa16.79■□□□□ 0.28
EXOSC3-207ENST00000490516 A0A0U1RQG5 324 aaPredicted RBP16.78■□□□□ 0.28
EXOSC3-207ENST00000490516 TLR3O15455 904 aaKnown RBP16.78■□□□□ 0.28
EXOSC3-207ENST00000490516 MCM3APO60318 1980 aa16.78■□□□□ 0.28
EXOSC3-207ENST00000490516 FLOT1O75955 427 aa16.77■□□□□ 0.28
EXOSC3-207ENST00000490516 CD4P01730 458 aa16.77■□□□□ 0.28
EXOSC3-207ENST00000490516 CA3P07451 260 aa16.77■□□□□ 0.28
EXOSC3-207ENST00000490516 C6orf222P0C671 652 aaPredicted RBP16.77■□□□□ 0.28
EXOSC3-207ENST00000490516 SHMT1P34896 483 aa16.77■□□□□ 0.28
EXOSC3-207ENST00000490516 CCL23P55773 120 aa16.77■□□□□ 0.28
EXOSC3-207ENST00000490516 TMEM132BQ14DG7 1078 aa16.77■□□□□ 0.28
EXOSC3-207ENST00000490516 FBXL18Q96ME1 805 aa16.77■□□□□ 0.28
EXOSC3-207ENST00000490516 EHD4Q9H223 541 aa16.77■□□□□ 0.28
EXOSC3-207ENST00000490516 HIPK3Q9H422 1215 aa16.77■□□□□ 0.28
EXOSC3-207ENST00000490516 FAM184BQ9ULE4 1060 aa16.77■□□□□ 0.28
EXOSC3-207ENST00000490516 DIS3Q9Y2L1 958 aaKnown RBP16.77■□□□□ 0.28
EXOSC3-207ENST00000490516 COL4A4P53420 1690 aaPredicted RBP16.77■□□□□ 0.28
EXOSC3-207ENST00000490516 ZBBXA8MT70 800 aa16.76■□□□□ 0.27
EXOSC3-207ENST00000490516 ADCY6O43306 1168 aa16.76■□□□□ 0.27
EXOSC3-207ENST00000490516 ATP2A2P16615 1042 aaKnown RBP16.76■□□□□ 0.27
EXOSC3-207ENST00000490516 CST5P28325 142 aaPredicted RBP16.76■□□□□ 0.27
EXOSC3-207ENST00000490516 SSH1Q8WYL5 1049 aa16.76■□□□□ 0.27
EXOSC3-207ENST00000490516 DUSP11O75319 330 aaKnown RBP16.75■□□□□ 0.27
EXOSC3-207ENST00000490516 SLC25A27O95847 323 aa16.75■□□□□ 0.27
EXOSC3-207ENST00000490516 SNAI1O95863 264 aaPredicted RBP16.75■□□□□ 0.27
EXOSC3-207ENST00000490516 USP5P45974 858 aa16.75■□□□□ 0.27
EXOSC3-207ENST00000490516 KCTD2Q14681 263 aa16.75■□□□□ 0.27
EXOSC3-207ENST00000490516 PCSK9Q8NBP7 692 aaKnown RBP16.75■□□□□ 0.27
EXOSC3-207ENST00000490516 ZHX1Q9UKY1 873 aaPredicted RBP16.75■□□□□ 0.27
EXOSC3-207ENST00000490516 SCN5AQ14524 2016 aa16.74■□□□□ 0.27
EXOSC3-207ENST00000490516 ARHGEF15O94989 841 aa16.74■□□□□ 0.27
EXOSC3-207ENST00000490516 UQCRFS1P1P0C7P4 283 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms