RNA–Protein interactions for RNA: ENST00000490504.5

PCCB-218, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 3 BASIC

Gene PCCB, Length 1,613 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-218ENST00000490504 NEK1Q96PY6 1258 aa18.39■□□□□ 0.53
PCCB-218ENST00000490504 RPAP3Q9H6T3 665 aaPredicted RBP18.39■□□□□ 0.53
PCCB-218ENST00000490504 ARPP21Q9UBL0 812 aaPredicted RBP18.39■□□□□ 0.53
PCCB-218ENST00000490504 CNMDO75829 334 aa18.38■□□□□ 0.53
PCCB-218ENST00000490504 ERVK-9P63128 1117 aa18.38■□□□□ 0.53
PCCB-218ENST00000490504 ERVK-24P63145 666 aa18.38■□□□□ 0.53
PCCB-218ENST00000490504 UBXN2AP68543 259 aa18.38■□□□□ 0.53
PCCB-218ENST00000490504 ANKRD1Q15327 319 aa18.38■□□□□ 0.53
PCCB-218ENST00000490504 STK11IPQ8N1F8 1099 aa18.38■□□□□ 0.53
PCCB-218ENST00000490504 GTF3C2Q8WUA4 911 aaPredicted RBP18.38■□□□□ 0.53
PCCB-218ENST00000490504 ZSCAN31Q96LW9 406 aaPredicted RBP18.38■□□□□ 0.53
PCCB-218ENST00000490504 MINDY4BA8MYZ0 360 aa18.38■□□□□ 0.53
PCCB-218ENST00000490504 HMGB1P09429 215 aaKnown RBP18.38■□□□□ 0.53
PCCB-218ENST00000490504 ICA1Q05084 483 aa18.38■□□□□ 0.53
PCCB-218ENST00000490504 RNF208Q9H0X6 261 aa18.38■□□□□ 0.53
PCCB-218ENST00000490504 UNC93B1Q9H1C4 597 aa18.38■□□□□ 0.53
PCCB-218ENST00000490504 PORCNQ9H237 461 aa18.38■□□□□ 0.53
PCCB-218ENST00000490504 PATL2C9JE40 543 aaKnown RBP18.37■□□□□ 0.53
PCCB-218ENST00000490504 FGAP02671 866 aa18.37■□□□□ 0.53
PCCB-218ENST00000490504 APPP05067 770 aa18.37■□□□□ 0.53
PCCB-218ENST00000490504 INHAP05111 366 aa18.37■□□□□ 0.53
PCCB-218ENST00000490504 GNAT2P19087 354 aa18.37■□□□□ 0.53
PCCB-218ENST00000490504 IMMTQ16891 758 aaKnown RBP18.37■□□□□ 0.53
PCCB-218ENST00000490504 SH2B1Q9NRF2 756 aaPredicted RBP18.37■□□□□ 0.53
PCCB-218ENST00000490504 RABGAP1Q9Y3P9 1069 aa18.37■□□□□ 0.53
PCCB-218ENST00000490504 NUCB2P80303 420 aa18.36■□□□□ 0.53
PCCB-218ENST00000490504 STOX1Q6ZVD7 989 aa18.36■□□□□ 0.53
PCCB-218ENST00000490504 IFNL3Q8IZI9 196 aa18.36■□□□□ 0.53
PCCB-218ENST00000490504 SHISA4Q96DD7 197 aa18.36■□□□□ 0.53
PCCB-218ENST00000490504 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.36■□□□□ 0.53
PCCB-218ENST00000490504 ARHGEF10LQ9HCE6 1279 aa18.36■□□□□ 0.53
PCCB-218ENST00000490504 TMX2Q9Y320 296 aa18.36■□□□□ 0.53
PCCB-218ENST00000490504 ZMYM6O95789 1325 aa18.35■□□□□ 0.53
PCCB-218ENST00000490504 SPDYE16A6NNV3 312 aaPredicted RBP18.35■□□□□ 0.53
PCCB-218ENST00000490504 E7EWF7 191 aa18.35■□□□□ 0.53
PCCB-218ENST00000490504 GJB1P08034 283 aa18.35■□□□□ 0.53
PCCB-218ENST00000490504 EEF2P13639 858 aaKnown RBP18.35■□□□□ 0.53
PCCB-218ENST00000490504 MAPK4P31152 587 aa18.35■□□□□ 0.53
PCCB-218ENST00000490504 TDO2P48775 406 aa18.35■□□□□ 0.53
PCCB-218ENST00000490504 LBX2Q6XYB7 198 aa18.35■□□□□ 0.53
PCCB-218ENST00000490504 SPICE1Q8N0Z3 855 aa18.35■□□□□ 0.53
PCCB-218ENST00000490504 BTBD7Q9P203 1132 aa18.35■□□□□ 0.53
PCCB-218ENST00000490504 RASA1P20936 1047 aa18.34■□□□□ 0.53
PCCB-218ENST00000490504 ATP2B2Q01814 1243 aa18.34■□□□□ 0.53
PCCB-218ENST00000490504 COL9A3Q14050 684 aaPredicted RBP18.34■□□□□ 0.53
PCCB-218ENST00000490504 VCPKMTQ9H867 229 aa18.34■□□□□ 0.53
PCCB-218ENST00000490504 KANSL2Q9H9L4 492 aa18.34■□□□□ 0.53
PCCB-218ENST00000490504 MKNK2Q9HBH9 465 aa18.34■□□□□ 0.53
PCCB-218ENST00000490504 BAZ2AQ9UIF9 1905 aaKnown RBP18.34■□□□□ 0.53
PCCB-218ENST00000490504 PDE4DIPQ5VU43 2346 aa18.34■□□□□ 0.53
PCCB-218ENST00000490504 MGAMO43451 1857 aa18.34■□□□□ 0.53
PCCB-218ENST00000490504 CYP2B6P20813 491 aa18.34■□□□□ 0.53
PCCB-218ENST00000490504 GJA8P48165 433 aa18.34■□□□□ 0.53
PCCB-218ENST00000490504 COG2Q14746 738 aa18.34■□□□□ 0.53
PCCB-218ENST00000490504 ALX1Q15699 326 aa18.34■□□□□ 0.53
PCCB-218ENST00000490504 GPR142Q7Z601 462 aa18.34■□□□□ 0.53
PCCB-218ENST00000490504 CCAR1Q8IX12 1150 aaKnown RBP18.34■□□□□ 0.53
PCCB-218ENST00000490504 TANGO6Q9C0B7 1094 aa18.34■□□□□ 0.53
PCCB-218ENST00000490504 TRIM32Q13049 653 aa18.33■□□□□ 0.52
PCCB-218ENST00000490504 TOB2Q14106 344 aaPredicted RBP18.33■□□□□ 0.52
PCCB-218ENST00000490504 DHX32Q7L7V1 743 aaKnown RBP18.33■□□□□ 0.52
PCCB-218ENST00000490504 PLEKHH3Q7Z736 793 aa18.33■□□□□ 0.52
PCCB-218ENST00000490504 NKX2-3Q8TAU0 364 aa18.33■□□□□ 0.52
PCCB-218ENST00000490504 LPAR1Q92633 364 aa18.33■□□□□ 0.52
PCCB-218ENST00000490504 USP6NLQ92738 828 aa18.33■□□□□ 0.52
PCCB-218ENST00000490504 TNPO1Q92973 898 aaKnown RBP18.33■□□□□ 0.52
PCCB-218ENST00000490504 TCEANC2Q96MN5 208 aa18.33■□□□□ 0.52
PCCB-218ENST00000490504 NUDT12Q9BQG2 462 aa18.33■□□□□ 0.52
PCCB-218ENST00000490504 LARP6Q9BRS8 491 aaKnown RBP18.33■□□□□ 0.52
PCCB-218ENST00000490504 SH2D4AQ9H788 454 aa18.33■□□□□ 0.52
PCCB-218ENST00000490504 HOXC10Q9NYD6 342 aa18.33■□□□□ 0.52
PCCB-218ENST00000490504 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.33■□□□□ 0.52
PCCB-218ENST00000490504 ROBO3Q96MS0 1386 aa18.33■□□□□ 0.52
PCCB-218ENST00000490504 ZNF213O14771 459 aa18.32■□□□□ 0.52
PCCB-218ENST00000490504 PRDM1O75626 825 aa18.32■□□□□ 0.52
PCCB-218ENST00000490504 LARGE1O95461 756 aa18.32■□□□□ 0.52
PCCB-218ENST00000490504 MORN1Q5T089 497 aa18.32■□□□□ 0.52
PCCB-218ENST00000490504 PRPF38BQ5VTL8 546 aaKnown RBP18.32■□□□□ 0.52
PCCB-218ENST00000490504 U2AF1L4Q8WU68 220 aaKnown RBP18.32■□□□□ 0.52
PCCB-218ENST00000490504 NACAP1Q9BZK3 213 aa18.32■□□□□ 0.52
PCCB-218ENST00000490504 RBBP6Q7Z6E9 1792 aaKnown RBP18.32■□□□□ 0.52
PCCB-218ENST00000490504 HMGCRP04035 888 aa18.31■□□□□ 0.52
PCCB-218ENST00000490504 HAND2P61296 217 aa18.31■□□□□ 0.52
PCCB-218ENST00000490504 CCNA1P78396 465 aa18.31■□□□□ 0.52
PCCB-218ENST00000490504 ME3Q16798 604 aa18.31■□□□□ 0.52
PCCB-218ENST00000490504 SOCS4Q8WXH5 440 aa18.31■□□□□ 0.52
PCCB-218ENST00000490504 TRIB2Q92519 343 aa18.31■□□□□ 0.52
PCCB-218ENST00000490504 DEFB118Q96PH6 123 aa18.31■□□□□ 0.52
PCCB-218ENST00000490504 TPCN1Q9ULQ1 816 aa18.31■□□□□ 0.52
PCCB-218ENST00000490504 SGPL1O95470 568 aa18.31■□□□□ 0.52
PCCB-218ENST00000490504 DSG3P32926 999 aa18.31■□□□□ 0.52
PCCB-218ENST00000490504 WDR78Q5VTH9 848 aa18.31■□□□□ 0.52
PCCB-218ENST00000490504 Q6ZUG5 572 aa18.31■□□□□ 0.52
PCCB-218ENST00000490504 NAPBQ9H115 298 aa18.31■□□□□ 0.52
PCCB-218ENST00000490504 PAK6Q9NQU5 681 aaPredicted RBP18.31■□□□□ 0.52
PCCB-218ENST00000490504 DOCK3Q8IZD9 2030 aa18.3■□□□□ 0.52
PCCB-218ENST00000490504 WDR46O15213 610 aaKnown RBP18.3■□□□□ 0.52
PCCB-218ENST00000490504 FLOT1O75955 427 aa18.3■□□□□ 0.52
PCCB-218ENST00000490504 XRCC5P13010 732 aaKnown RBP18.3■□□□□ 0.52
PCCB-218ENST00000490504 EXOSC10Q01780 885 aaKnown RBP18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms