RNA–Protein interactions for RNA: ENST00000490258.1

CRNKL1-203, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 2

Gene CRNKL1, Length 733 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-203ENST00000490258 SYN1P17600 705 aa4.5□□□□□ -1.69
CRNKL1-203ENST00000490258 NTF4P34130 210 aa4.5□□□□□ -1.69
CRNKL1-203ENST00000490258 KIF4BQ2VIQ3 1234 aa4.5□□□□□ -1.69
CRNKL1-203ENST00000490258 CIAPIN1Q6FI81 312 aa4.5□□□□□ -1.69
CRNKL1-203ENST00000490258 SEMA6CQ9H3T2 930 aa4.5□□□□□ -1.69
CRNKL1-203ENST00000490258 C1GALT1Q9NS00 363 aa4.5□□□□□ -1.69
CRNKL1-203ENST00000490258 CRIM1Q9NZV1 1036 aa4.5□□□□□ -1.69
CRNKL1-203ENST00000490258 CPS1P31327 1500 aa4.5□□□□□ -1.69
CRNKL1-203ENST00000490258 NKTRP30414 1462 aaKnown RBP4.49□□□□□ -1.69
CRNKL1-203ENST00000490258 ABCA3Q99758 1704 aa4.49□□□□□ -1.69
CRNKL1-203ENST00000490258 SETBP1Q9Y6X0 1596 aa4.49□□□□□ -1.69
CRNKL1-203ENST00000490258 VIRMAQ69YN4 1812 aaKnown RBP4.49□□□□□ -1.69
CRNKL1-203ENST00000490258 PIK3C2GO75747 1445 aa4.49□□□□□ -1.69
CRNKL1-203ENST00000490258 FAM177BA6PVY3 158 aa4.49□□□□□ -1.69
CRNKL1-203ENST00000490258 SUV39H1O43463 412 aa4.49□□□□□ -1.69
CRNKL1-203ENST00000490258 AOC2O75106 756 aa4.49□□□□□ -1.69
CRNKL1-203ENST00000490258 GADD45BO75293 160 aaPredicted RBP4.49□□□□□ -1.69
CRNKL1-203ENST00000490258 PAGE1O75459 146 aa4.49□□□□□ -1.69
CRNKL1-203ENST00000490258 CYP11A1P05108 521 aa4.49□□□□□ -1.69
CRNKL1-203ENST00000490258 FCGRTP55899 365 aa4.49□□□□□ -1.69
CRNKL1-203ENST00000490258 PLCB3Q01970 1234 aa4.49□□□□□ -1.69
CRNKL1-203ENST00000490258 AP3B2Q13367 1082 aa4.49□□□□□ -1.69
CRNKL1-203ENST00000490258 TMEM132EQ6IEE7 984 aa4.49□□□□□ -1.69
CRNKL1-203ENST00000490258 MPRIPQ6WCQ1 1025 aa4.49□□□□□ -1.69
CRNKL1-203ENST00000490258 NPAS4Q8IUM7 802 aa4.49□□□□□ -1.69
CRNKL1-203ENST00000490258 PNISRQ8TF01 805 aaKnown RBP4.49□□□□□ -1.69
CRNKL1-203ENST00000490258 NECAB3Q96P71 396 aaPredicted RBP4.49□□□□□ -1.69
CRNKL1-203ENST00000490258 YIPF2Q9BWQ6 316 aa4.49□□□□□ -1.69
CRNKL1-203ENST00000490258 BACH2Q9BYV9 841 aa4.49□□□□□ -1.69
CRNKL1-203ENST00000490258 CYP4F12Q9HCS2 524 aa4.49□□□□□ -1.69
CRNKL1-203ENST00000490258 PARD6AQ9NPB6 346 aa4.49□□□□□ -1.69
CRNKL1-203ENST00000490258 BRD4O60885 1362 aaPredicted RBP4.49□□□□□ -1.69
CRNKL1-203ENST00000490258 ZMYM3Q14202 1370 aa4.49□□□□□ -1.69
CRNKL1-203ENST00000490258 USP47Q96K76 1375 aa4.49□□□□□ -1.69
CRNKL1-203ENST00000490258 NRXN1Q9ULB1 1477 aa4.49□□□□□ -1.69
CRNKL1-203ENST00000490258 DIP2AQ14689 1571 aa4.48□□□□□ -1.69
CRNKL1-203ENST00000490258 EIF4EBP3O60516 100 aaPredicted RBP4.48□□□□□ -1.69
CRNKL1-203ENST00000490258 NEFMP07197 916 aa4.48□□□□□ -1.69
CRNKL1-203ENST00000490258 GSTP1P09211 210 aaKnown RBP4.48□□□□□ -1.69
CRNKL1-203ENST00000490258 XRCC5P13010 732 aaKnown RBP4.48□□□□□ -1.69
CRNKL1-203ENST00000490258 BMP6P22004 513 aa4.48□□□□□ -1.69
CRNKL1-203ENST00000490258 RRP1P56182 461 aaKnown RBP4.48□□□□□ -1.69
CRNKL1-203ENST00000490258 NFKB2Q00653 900 aa4.48□□□□□ -1.69
CRNKL1-203ENST00000490258 RING1Q06587 406 aa4.48□□□□□ -1.69
CRNKL1-203ENST00000490258 IDI1Q13907 227 aa4.48□□□□□ -1.69
CRNKL1-203ENST00000490258 KCNA10Q16322 511 aa4.48□□□□□ -1.69
CRNKL1-203ENST00000490258 PRR23BQ6ZRT6 265 aa4.48□□□□□ -1.69
CRNKL1-203ENST00000490258 SND1Q7KZF4 910 aaKnown RBP eCLIP4.48□□□□□ -1.69
CRNKL1-203ENST00000490258 TMC1Q8TDI8 760 aa4.48□□□□□ -1.69
CRNKL1-203ENST00000490258 DISC1Q9NRI5 854 aa4.48□□□□□ -1.69
CRNKL1-203ENST00000490258 KRT82Q9NSB4 513 aa4.48□□□□□ -1.69
CRNKL1-203ENST00000490258 U3KQE9 123 aa4.48□□□□□ -1.69
CRNKL1-203ENST00000490258 SHPRHQ149N8 1683 aa4.48□□□□□ -1.69
CRNKL1-203ENST00000490258 LTN1O94822 1766 aa4.48□□□□□ -1.69
CRNKL1-203ENST00000490258 SETD1BQ9UPS6 1966 aaKnown RBP4.47□□□□□ -1.69
CRNKL1-203ENST00000490258 ARHGAP31Q2M1Z3 1444 aa4.47□□□□□ -1.69
CRNKL1-203ENST00000490258 ADAMTS13Q76LX8 1427 aa4.47□□□□□ -1.69
CRNKL1-203ENST00000490258 A0A0G2JLL6 359 aaPredicted RBP4.47□□□□□ -1.69
CRNKL1-203ENST00000490258 ZNF157P51786 506 aaPredicted RBP4.47□□□□□ -1.69
CRNKL1-203ENST00000490258 PRRT2Q7Z6L0 340 aaPredicted RBP4.47□□□□□ -1.69
CRNKL1-203ENST00000490258 FBXO33Q7Z6M2 555 aa4.47□□□□□ -1.69
CRNKL1-203ENST00000490258 FAM9BQ8IZU0 186 aa4.47□□□□□ -1.69
CRNKL1-203ENST00000490258 FAM43AQ8N2R8 423 aa4.47□□□□□ -1.69
CRNKL1-203ENST00000490258 RGS22Q8NE09 1264 aa4.47□□□□□ -1.69
CRNKL1-203ENST00000490258 CD320Q9NPF0 282 aa4.47□□□□□ -1.69
CRNKL1-203ENST00000490258 TMEM39AQ9NV64 488 aa4.47□□□□□ -1.69
CRNKL1-203ENST00000490258 STK26Q9P289 416 aa4.47□□□□□ -1.69
CRNKL1-203ENST00000490258 NWD1Q149M9 1564 aa4.47□□□□□ -1.69
CRNKL1-203ENST00000490258 PIK3C2AO00443 1686 aa4.47□□□□□ -1.69
CRNKL1-203ENST00000490258 BLMP54132 1417 aaPredicted RBP4.46□□□□□ -1.69
CRNKL1-203ENST00000490258 CRYBG1Q9Y4K1 1723 aa4.46□□□□□ -1.69
CRNKL1-203ENST00000490258 SCAF11Q99590 1463 aaKnown RBP4.46□□□□□ -1.7
CRNKL1-203ENST00000490258 ARHGAP23Q9P227 1491 aa4.46□□□□□ -1.7
CRNKL1-203ENST00000490258 METP08581 1390 aa4.46□□□□□ -1.7
CRNKL1-203ENST00000490258 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.46□□□□□ -1.7
CRNKL1-203ENST00000490258 IGSF3O75054 1194 aa4.46□□□□□ -1.7
CRNKL1-203ENST00000490258 HMGB1P09429 215 aaKnown RBP4.46□□□□□ -1.7
CRNKL1-203ENST00000490258 LIG1P18858 919 aa4.46□□□□□ -1.7
CRNKL1-203ENST00000490258 ZC3H12AQ5D1E8 599 aaKnown RBP4.46□□□□□ -1.7
CRNKL1-203ENST00000490258 DTHD1Q6ZMT9 781 aa4.46□□□□□ -1.7
CRNKL1-203ENST00000490258 SULF2Q8IWU5 870 aa4.46□□□□□ -1.7
CRNKL1-203ENST00000490258 FANCD2OSQ96PS1 177 aa4.46□□□□□ -1.7
CRNKL1-203ENST00000490258 CORO1BQ9BR76 489 aa4.46□□□□□ -1.7
CRNKL1-203ENST00000490258 SRCIN1Q9C0H9 1055 aa4.46□□□□□ -1.7
CRNKL1-203ENST00000490258 C12orf49Q9H741 205 aa4.46□□□□□ -1.7
CRNKL1-203ENST00000490258 VAV3Q9UKW4 847 aa4.46□□□□□ -1.7
CRNKL1-203ENST00000490258 PPM1HQ9ULR3 514 aa4.46□□□□□ -1.7
CRNKL1-203ENST00000490258 PEAK1Q9H792 1746 aa4.46□□□□□ -1.7
CRNKL1-203ENST00000490258 PHRF1Q9P1Y6 1649 aaKnown RBP4.46□□□□□ -1.7
CRNKL1-203ENST00000490258 SLIT1O75093 1534 aa4.46□□□□□ -1.7
CRNKL1-203ENST00000490258 KDM2BQ8NHM5 1336 aa4.46□□□□□ -1.7
CRNKL1-203ENST00000490258 PARD3Q8TEW0 1356 aa4.45□□□□□ -1.7
CRNKL1-203ENST00000490258 NFICP08651 508 aa4.45□□□□□ -1.7
CRNKL1-203ENST00000490258 CELA3AP09093 270 aa4.45□□□□□ -1.7
CRNKL1-203ENST00000490258 TMEM253P0C7T8 217 aa4.45□□□□□ -1.7
CRNKL1-203ENST00000490258 NME2P22392 152 aa4.45□□□□□ -1.7
CRNKL1-203ENST00000490258 ARNTP27540 789 aa4.45□□□□□ -1.7
CRNKL1-203ENST00000490258 LTKP29376 864 aa4.45□□□□□ -1.7
CRNKL1-203ENST00000490258 CD96P40200 585 aa4.45□□□□□ -1.7
CRNKL1-203ENST00000490258 MAPK8P45983 427 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms