RNA–Protein interactions for RNA: ENST00000490179.2

TSC1-206, Transcript of TSC complex subunit 1, humanhuman

TSL 3

Gene TSC1, Length 681 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC1-206ENST00000490179 SENP2Q9HC62 589 aa17.21■□□□□ 0.35
TSC1-206ENST00000490179 ZCCHC17Q9NP64 241 aaKnown RBP17.21■□□□□ 0.35
TSC1-206ENST00000490179 PNMA3Q9UL41 463 aa17.21■□□□□ 0.35
TSC1-206ENST00000490179 SLC45A1Q9Y2W3 748 aa17.21■□□□□ 0.35
TSC1-206ENST00000490179 HOXA7P31268 230 aaPredicted RBP17.2■□□□□ 0.34
TSC1-206ENST00000490179 NEK4P51957 841 aa17.2■□□□□ 0.34
TSC1-206ENST00000490179 IRX3P78415 501 aaPredicted RBP17.2■□□□□ 0.34
TSC1-206ENST00000490179 MAP2K1Q02750 393 aaPredicted RBP17.2■□□□□ 0.34
TSC1-206ENST00000490179 SGMS1Q86VZ5 419 aa17.2■□□□□ 0.34
TSC1-206ENST00000490179 BRF1Q92994 677 aa17.2■□□□□ 0.34
TSC1-206ENST00000490179 SLC12A7Q9Y666 1083 aa17.2■□□□□ 0.34
TSC1-206ENST00000490179 PDHBP11177 359 aa17.19■□□□□ 0.34
TSC1-206ENST00000490179 TAF1CQ15572 869 aaPredicted RBP17.19■□□□□ 0.34
TSC1-206ENST00000490179 CATSPERGQ6ZRH7 1159 aa17.19■□□□□ 0.34
TSC1-206ENST00000490179 ZNF654Q8IZM8 581 aa17.19■□□□□ 0.34
TSC1-206ENST00000490179 FBXL16Q8N461 479 aa17.19■□□□□ 0.34
TSC1-206ENST00000490179 PARK7Q99497 189 aaKnown RBP17.19■□□□□ 0.34
TSC1-206ENST00000490179 KIF2CQ99661 725 aa17.19■□□□□ 0.34
TSC1-206ENST00000490179 BEGAINQ9BUH8 593 aa17.19■□□□□ 0.34
TSC1-206ENST00000490179 NAP1L2Q9ULW6 460 aaPredicted RBP17.19■□□□□ 0.34
TSC1-206ENST00000490179 KLF18A0A0U1RQI7 1052 aa17.18■□□□□ 0.34
TSC1-206ENST00000490179 DDAH1O94760 285 aa17.18■□□□□ 0.34
TSC1-206ENST00000490179 PARP1P09874 1014 aaKnown RBP17.18■□□□□ 0.34
TSC1-206ENST00000490179 CALM1P0DP23 149 aa17.18■□□□□ 0.34
TSC1-206ENST00000490179 CALM2P0DP24 149 aa17.18■□□□□ 0.34
TSC1-206ENST00000490179 CALM3P0DP25 149 aa17.18■□□□□ 0.34
TSC1-206ENST00000490179 SNHG28P0DPA3 235 aa17.18■□□□□ 0.34
TSC1-206ENST00000490179 IKQ13123 557 aaPredicted RBP17.18■□□□□ 0.34
TSC1-206ENST00000490179 RABEP1Q15276 862 aa17.18■□□□□ 0.34
TSC1-206ENST00000490179 ANKRD1Q15327 319 aa17.18■□□□□ 0.34
TSC1-206ENST00000490179 KCTD1Q719H9 257 aa17.18■□□□□ 0.34
TSC1-206ENST00000490179 RASGRP2Q7LDG7 609 aa17.18■□□□□ 0.34
TSC1-206ENST00000490179 NUP133Q8WUM0 1156 aa17.18■□□□□ 0.34
TSC1-206ENST00000490179 AGXT2Q9BYV1 514 aa17.18■□□□□ 0.34
TSC1-206ENST00000490179 ASCC2Q9H1I8 757 aaPredicted RBP17.18■□□□□ 0.34
TSC1-206ENST00000490179 FEM1BQ9UK73 627 aa17.18■□□□□ 0.34
TSC1-206ENST00000490179 FRMPD2Q68DX3 1309 aaPredicted RBP17.18■□□□□ 0.34
TSC1-206ENST00000490179 TMEM232C9JQI7 657 aa17.17■□□□□ 0.34
TSC1-206ENST00000490179 FLOT1O75955 427 aa17.17■□□□□ 0.34
TSC1-206ENST00000490179 ZNF543Q08ER8 600 aa17.17■□□□□ 0.34
TSC1-206ENST00000490179 APOBRQ0VD83 1088 aa17.17■□□□□ 0.34
TSC1-206ENST00000490179 COG2Q14746 738 aa17.17■□□□□ 0.34
TSC1-206ENST00000490179 ASPRV1Q53RT3 343 aa17.17■□□□□ 0.34
TSC1-206ENST00000490179 GPATCH4Q5T3I0 446 aaKnown RBP17.17■□□□□ 0.34
TSC1-206ENST00000490179 SAMD1Q6SPF0 538 aaPredicted RBP17.17■□□□□ 0.34
TSC1-206ENST00000490179 SMCR8Q8TEV9 937 aaPredicted RBP17.17■□□□□ 0.34
TSC1-206ENST00000490179 CHURC1Q8WUH1 139 aa17.17■□□□□ 0.34
TSC1-206ENST00000490179 MYL10Q9BUA6 226 aa17.17■□□□□ 0.34
TSC1-206ENST00000490179 ALDH8A1Q9H2A2 487 aaPredicted RBP17.17■□□□□ 0.34
TSC1-206ENST00000490179 ZFYVE28Q9HCC9 887 aa17.17■□□□□ 0.34
TSC1-206ENST00000490179 GPCPD1Q9NPB8 672 aa17.17■□□□□ 0.34
TSC1-206ENST00000490179 CEP350Q5VT06 3117 aa17.16■□□□□ 0.34
TSC1-206ENST00000490179 ZBTB43O43298 467 aa17.16■□□□□ 0.34
TSC1-206ENST00000490179 TRPA1O75762 1119 aa17.16■□□□□ 0.34
TSC1-206ENST00000490179 GOLGA8HP0CJ92 632 aa17.16■□□□□ 0.34
TSC1-206ENST00000490179 CYP2C8P10632 490 aa17.16■□□□□ 0.34
TSC1-206ENST00000490179 STAT2P52630 851 aa17.16■□□□□ 0.34
TSC1-206ENST00000490179 TROAPQ12815 778 aa17.16■□□□□ 0.34
TSC1-206ENST00000490179 TOB2Q14106 344 aaPredicted RBP17.16■□□□□ 0.34
TSC1-206ENST00000490179 GRM4Q14833 912 aa17.16■□□□□ 0.34
TSC1-206ENST00000490179 APOA5Q6Q788 366 aa17.16■□□□□ 0.34
TSC1-206ENST00000490179 FAM160B2Q86V87 743 aa17.16■□□□□ 0.34
TSC1-206ENST00000490179 MICU3Q86XE3 530 aa17.16■□□□□ 0.34
TSC1-206ENST00000490179 CTCFLQ8NI51 663 aaPredicted RBP17.16■□□□□ 0.34
TSC1-206ENST00000490179 MAP3K14Q99558 947 aa17.16■□□□□ 0.34
TSC1-206ENST00000490179 P2RX7Q99572 595 aaKnown RBP17.16■□□□□ 0.34
TSC1-206ENST00000490179 SLF1Q9BQI6 1058 aa17.16■□□□□ 0.34
TSC1-206ENST00000490179 RNF186Q9NXI6 227 aa17.16■□□□□ 0.34
TSC1-206ENST00000490179 HOXC10Q9NYD6 342 aa17.16■□□□□ 0.34
TSC1-206ENST00000490179 BRPF3Q9ULD4 1205 aa17.16■□□□□ 0.34
TSC1-206ENST00000490179 CA12O43570 354 aa17.15■□□□□ 0.34
TSC1-206ENST00000490179 KIF5BP33176 963 aa17.15■□□□□ 0.34
TSC1-206ENST00000490179 AK2P54819 239 aa17.15■□□□□ 0.34
TSC1-206ENST00000490179 HERVK_113P62684 666 aa17.15■□□□□ 0.34
TSC1-206ENST00000490179 RAB11FIP4Q86YS3 637 aa17.15■□□□□ 0.34
TSC1-206ENST00000490179 PRPF38AQ8NAV1 312 aaKnown RBP17.15■□□□□ 0.34
TSC1-206ENST00000490179 IL27Q8NEV9 243 aa17.15■□□□□ 0.34
TSC1-206ENST00000490179 KIFC2Q96AC6 838 aa17.15■□□□□ 0.34
TSC1-206ENST00000490179 FBXO28Q9NVF7 368 aa17.15■□□□□ 0.34
TSC1-206ENST00000490179 MYPNQ86TC9 1320 aa17.15■□□□□ 0.34
TSC1-206ENST00000490179 GOLGA8BA8MQT2 603 aa17.14■□□□□ 0.33
TSC1-206ENST00000490179 ST18O60284 1047 aa17.14■□□□□ 0.33
TSC1-206ENST00000490179 PLA2G6O60733 806 aa17.14■□□□□ 0.33
TSC1-206ENST00000490179 RXRAP19793 462 aa17.14■□□□□ 0.33
TSC1-206ENST00000490179 DSG3P32926 999 aa17.14■□□□□ 0.33
TSC1-206ENST00000490179 RCAN1P53805 252 aa17.14■□□□□ 0.33
TSC1-206ENST00000490179 CRHR2Q13324 411 aa17.14■□□□□ 0.33
TSC1-206ENST00000490179 TTBK2Q6IQ55 1244 aa17.14■□□□□ 0.33
TSC1-206ENST00000490179 CCDC144CPQ8IYA2 1237 aa17.14■□□□□ 0.33
TSC1-206ENST00000490179 JMYQ8N9B5 988 aa17.14■□□□□ 0.33
TSC1-206ENST00000490179 GTF3C2Q8WUA4 911 aaPredicted RBP17.14■□□□□ 0.33
TSC1-206ENST00000490179 LARP6Q9BRS8 491 aaKnown RBP17.14■□□□□ 0.33
TSC1-206ENST00000490179 SAGE1Q9NXZ1 904 aa17.14■□□□□ 0.33
TSC1-206ENST00000490179 MAD2L2Q9UI95 211 aa17.14■□□□□ 0.33
TSC1-206ENST00000490179 PPP1R9AQ9ULJ8 1098 aa17.14■□□□□ 0.33
TSC1-206ENST00000490179 CTDP1Q9Y5B0 961 aaPredicted RBP17.14■□□□□ 0.33
TSC1-206ENST00000490179 PARP14Q460N5 1801 aa17.14■□□□□ 0.33
TSC1-206ENST00000490179 PALM3A6NDB9 673 aaPredicted RBP17.13■□□□□ 0.33
TSC1-206ENST00000490179 SPDYE16A6NNV3 312 aaPredicted RBP17.13■□□□□ 0.33
TSC1-206ENST00000490179 GOLGA8AA7E2F4 631 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms