RNA–Protein interactions for RNA: ENST00000490056.5

SFXN5-220, Transcript of sideroflexin 5, humanhuman

TSL 1 (best)

Gene SFXN5, Length 906 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN5-220ENST00000490056 TSKSQ9UJT2 592 aa19.62■□□□□ 0.73
SFXN5-220ENST00000490056 ISY1Q9ULR0 285 aaKnown RBP19.62■□□□□ 0.73
SFXN5-220ENST00000490056 CA12O43570 354 aa19.61■□□□□ 0.73
SFXN5-220ENST00000490056 BMP3P12645 472 aa19.61■□□□□ 0.73
SFXN5-220ENST00000490056 OSBPP22059 807 aa19.61■□□□□ 0.73
SFXN5-220ENST00000490056 SLC1A4P43007 532 aa19.61■□□□□ 0.73
SFXN5-220ENST00000490056 IRX3P78415 501 aaPredicted RBP19.61■□□□□ 0.73
SFXN5-220ENST00000490056 CRHR2Q13324 411 aa19.61■□□□□ 0.73
SFXN5-220ENST00000490056 Q6ZUG5 572 aa19.61■□□□□ 0.73
SFXN5-220ENST00000490056 KCTD1Q719H9 257 aa19.61■□□□□ 0.73
SFXN5-220ENST00000490056 GMCL1Q96IK5 515 aa19.61■□□□□ 0.73
SFXN5-220ENST00000490056 FBXO28Q9NVF7 368 aa19.61■□□□□ 0.73
SFXN5-220ENST00000490056 CYP46A1Q9Y6A2 500 aa19.61■□□□□ 0.73
SFXN5-220ENST00000490056 FRMPD2Q68DX3 1309 aaPredicted RBP19.6■□□□□ 0.73
SFXN5-220ENST00000490056 PDHBP11177 359 aa19.6■□□□□ 0.73
SFXN5-220ENST00000490056 RBM25P49756 843 aaKnown RBP19.6■□□□□ 0.73
SFXN5-220ENST00000490056 CCDC96Q2M329 555 aa19.6■□□□□ 0.73
SFXN5-220ENST00000490056 NFXL1Q6ZNB6 911 aa19.6■□□□□ 0.73
SFXN5-220ENST00000490056 DCAF4Q8WV16 495 aa19.6■□□□□ 0.73
SFXN5-220ENST00000490056 IL17RAQ96F46 866 aa19.6■□□□□ 0.73
SFXN5-220ENST00000490056 ZFYVE28Q9HCC9 887 aa19.6■□□□□ 0.73
SFXN5-220ENST00000490056 GPCPD1Q9NPB8 672 aa19.6■□□□□ 0.73
SFXN5-220ENST00000490056 CCDC69A6NI79 296 aa19.59■□□□□ 0.73
SFXN5-220ENST00000490056 TMEM232C9JQI7 657 aa19.59■□□□□ 0.73
SFXN5-220ENST00000490056 FLOT1O75955 427 aa19.59■□□□□ 0.73
SFXN5-220ENST00000490056 LIFRP42702 1097 aa19.59■□□□□ 0.73
SFXN5-220ENST00000490056 FGD1P98174 961 aa19.59■□□□□ 0.73
SFXN5-220ENST00000490056 TTBK2Q6IQ55 1244 aa19.59■□□□□ 0.73
SFXN5-220ENST00000490056 RAB11FIP4Q86YS3 637 aa19.59■□□□□ 0.73
SFXN5-220ENST00000490056 PARK7Q99497 189 aaKnown RBP19.59■□□□□ 0.73
SFXN5-220ENST00000490056 KIF2CQ99661 725 aa19.59■□□□□ 0.73
SFXN5-220ENST00000490056 MYL10Q9BUA6 226 aa19.59■□□□□ 0.73
SFXN5-220ENST00000490056 PNMA3Q9UL41 463 aa19.59■□□□□ 0.73
SFXN5-220ENST00000490056 PEX10O60683 326 aa19.58■□□□□ 0.72
SFXN5-220ENST00000490056 GOLGA8HP0CJ92 632 aa19.58■□□□□ 0.72
SFXN5-220ENST00000490056 SNHG28P0DPA3 235 aa19.58■□□□□ 0.72
SFXN5-220ENST00000490056 HERVK_113P62684 666 aa19.58■□□□□ 0.72
SFXN5-220ENST00000490056 COG2Q14746 738 aa19.58■□□□□ 0.72
SFXN5-220ENST00000490056 POTEEQ6S8J3 1075 aa19.58■□□□□ 0.72
SFXN5-220ENST00000490056 CATIPQ7Z7H3 387 aa19.58■□□□□ 0.72
SFXN5-220ENST00000490056 ZNF654Q8IZM8 581 aa19.58■□□□□ 0.72
SFXN5-220ENST00000490056 TMTC2Q8N394 836 aa19.58■□□□□ 0.72
SFXN5-220ENST00000490056 SMCR8Q8TEV9 937 aaPredicted RBP19.58■□□□□ 0.72
SFXN5-220ENST00000490056 TBC1D32Q96NH3 1257 aa19.58■□□□□ 0.72
SFXN5-220ENST00000490056 PDRG1Q9NUG6 133 aa19.58■□□□□ 0.72
SFXN5-220ENST00000490056 SAGE1Q9NXZ1 904 aa19.58■□□□□ 0.72
SFXN5-220ENST00000490056 CPA4Q9UI42 421 aa19.58■□□□□ 0.72
SFXN5-220ENST00000490056 BRPF3Q9ULD4 1205 aa19.58■□□□□ 0.72
SFXN5-220ENST00000490056 ADGRA2Q96PE1 1338 aa19.57■□□□□ 0.72
SFXN5-220ENST00000490056 RLFQ13129 1914 aa19.57■□□□□ 0.72
SFXN5-220ENST00000490056 SPDYE16A6NNV3 312 aaPredicted RBP19.57■□□□□ 0.72
SFXN5-220ENST00000490056 TLR2O60603 784 aa19.57■□□□□ 0.72
SFXN5-220ENST00000490056 HSPA1AP0DMV8 641 aaKnown RBP19.57■□□□□ 0.72
SFXN5-220ENST00000490056 HSPA1BP0DMV9 641 aaKnown RBP19.57■□□□□ 0.72
SFXN5-220ENST00000490056 DSG3P32926 999 aa19.57■□□□□ 0.72
SFXN5-220ENST00000490056 ZNF543Q08ER8 600 aa19.57■□□□□ 0.72
SFXN5-220ENST00000490056 APOBRQ0VD83 1088 aa19.57■□□□□ 0.72
SFXN5-220ENST00000490056 IKQ13123 557 aaPredicted RBP19.57■□□□□ 0.72
SFXN5-220ENST00000490056 SGMS1Q86VZ5 419 aa19.57■□□□□ 0.72
SFXN5-220ENST00000490056 NUP133Q8WUM0 1156 aa19.57■□□□□ 0.72
SFXN5-220ENST00000490056 BRF1Q92994 677 aa19.57■□□□□ 0.72
SFXN5-220ENST00000490056 ATG4CQ96DT6 458 aa19.57■□□□□ 0.72
SFXN5-220ENST00000490056 LARP6Q9BRS8 491 aaKnown RBP19.57■□□□□ 0.72
SFXN5-220ENST00000490056 FEM1BQ9UK73 627 aa19.57■□□□□ 0.72
SFXN5-220ENST00000490056 FOXN1O15353 648 aa19.56■□□□□ 0.72
SFXN5-220ENST00000490056 RXRAP19793 462 aa19.56■□□□□ 0.72
SFXN5-220ENST00000490056 SLC16A2P36021 539 aa19.56■□□□□ 0.72
SFXN5-220ENST00000490056 TROAPQ12815 778 aa19.56■□□□□ 0.72
SFXN5-220ENST00000490056 TOB2Q14106 344 aaPredicted RBP19.56■□□□□ 0.72
SFXN5-220ENST00000490056 STAG2Q8N3U4 1231 aa19.56■□□□□ 0.72
SFXN5-220ENST00000490056 KIFC2Q96AC6 838 aa19.56■□□□□ 0.72
SFXN5-220ENST00000490056 CFHR5Q9BXR6 569 aa19.56■□□□□ 0.72
SFXN5-220ENST00000490056 AGXT2Q9BYV1 514 aa19.56■□□□□ 0.72
SFXN5-220ENST00000490056 HOXC10Q9NYD6 342 aa19.56■□□□□ 0.72
SFXN5-220ENST00000490056 PPP1R9AQ9ULJ8 1098 aa19.56■□□□□ 0.72
SFXN5-220ENST00000490056 SLC12A7Q9Y666 1083 aa19.56■□□□□ 0.72
SFXN5-220ENST00000490056 PARP14Q460N5 1801 aa19.55■□□□□ 0.72
SFXN5-220ENST00000490056 KLF18A0A0U1RQI7 1052 aa19.55■□□□□ 0.72
SFXN5-220ENST00000490056 NEK4P51957 841 aa19.55■□□□□ 0.72
SFXN5-220ENST00000490056 GRM4Q14833 912 aa19.55■□□□□ 0.72
SFXN5-220ENST00000490056 APOA5Q6Q788 366 aa19.55■□□□□ 0.72
SFXN5-220ENST00000490056 C17orf99Q6UX52 265 aa19.55■□□□□ 0.72
SFXN5-220ENST00000490056 ANKRD13CQ8N6S4 541 aa19.55■□□□□ 0.72
SFXN5-220ENST00000490056 SLF1Q9BQI6 1058 aa19.55■□□□□ 0.72
SFXN5-220ENST00000490056 PAGR1Q9BTK6 254 aa19.55■□□□□ 0.72
SFXN5-220ENST00000490056 UBA5Q9GZZ9 404 aa19.55■□□□□ 0.72
SFXN5-220ENST00000490056 CPVLQ9H3G5 476 aa19.55■□□□□ 0.72
SFXN5-220ENST00000490056 TXNRD2Q9NNW7 524 aa19.55■□□□□ 0.72
SFXN5-220ENST00000490056 RBPJLQ9UBG7 517 aa19.55■□□□□ 0.72
SFXN5-220ENST00000490056 MAD2L2Q9UI95 211 aa19.55■□□□□ 0.72
SFXN5-220ENST00000490056 NAP1L2Q9ULW6 460 aaPredicted RBP19.55■□□□□ 0.72
SFXN5-220ENST00000490056 DDAH1O94760 285 aa19.54■□□□□ 0.72
SFXN5-220ENST00000490056 PARP1P09874 1014 aaKnown RBP19.54■□□□□ 0.72
SFXN5-220ENST00000490056 STAT2P52630 851 aa19.54■□□□□ 0.72
SFXN5-220ENST00000490056 SNAP25P60880 206 aa19.54■□□□□ 0.72
SFXN5-220ENST00000490056 FAM160B2Q86V87 743 aa19.54■□□□□ 0.72
SFXN5-220ENST00000490056 CCDC144CPQ8IYA2 1237 aa19.54■□□□□ 0.72
SFXN5-220ENST00000490056 FBXL16Q8N461 479 aa19.54■□□□□ 0.72
SFXN5-220ENST00000490056 PRPF38AQ8NAV1 312 aaKnown RBP19.54■□□□□ 0.72
SFXN5-220ENST00000490056 CHURC1Q8WUH1 139 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms