RNA–Protein interactions for RNA: ENST00000490033.5

C2orf88-208, Transcript of chromosome 2 open reading frame 88, humanhuman

TSL 3

Gene C2orf88, Length 482 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2orf88-208ENST00000490033 SHOXO15266 292 aa4.35□□□□□ -1.71
C2orf88-208ENST00000490033 TPD52L2O43399 206 aaKnown RBP4.35□□□□□ -1.71
C2orf88-208ENST00000490033 OIP5O43482 229 aa4.35□□□□□ -1.71
C2orf88-208ENST00000490033 PRC1O43663 620 aa4.35□□□□□ -1.71
C2orf88-208ENST00000490033 DLX3O60479 287 aa4.35□□□□□ -1.71
C2orf88-208ENST00000490033 EFCAB14O75071 495 aa4.35□□□□□ -1.71
C2orf88-208ENST00000490033 PEX14O75381 377 aa4.35□□□□□ -1.71
C2orf88-208ENST00000490033 KATNA1O75449 491 aa4.35□□□□□ -1.71
C2orf88-208ENST00000490033 WISP1O95388 367 aa4.35□□□□□ -1.71
C2orf88-208ENST00000490033 ADAMTS2O95450 1211 aa4.35□□□□□ -1.71
C2orf88-208ENST00000490033 VSIG8P0DPA2 414 aa4.35□□□□□ -1.71
C2orf88-208ENST00000490033 ITGA4P13612 1032 aa4.35□□□□□ -1.71
C2orf88-208ENST00000490033 DRD2P14416 443 aa4.35□□□□□ -1.71
C2orf88-208ENST00000490033 NEK4P51957 841 aa4.35□□□□□ -1.71
C2orf88-208ENST00000490033 GABREP78334 506 aa4.35□□□□□ -1.71
C2orf88-208ENST00000490033 SOX4Q06945 474 aaPredicted RBP4.35□□□□□ -1.71
C2orf88-208ENST00000490033 PCBP1Q15365 356 aaKnown RBP eCLIP4.35□□□□□ -1.71
C2orf88-208ENST00000490033 NFE2Q16621 373 aaPredicted RBP4.35□□□□□ -1.71
C2orf88-208ENST00000490033 TRAPPC3LQ5T215 181 aa4.35□□□□□ -1.71
C2orf88-208ENST00000490033 ZNF787Q6DD87 383 aa4.35□□□□□ -1.71
C2orf88-208ENST00000490033 PKN3Q6P5Z2 889 aa4.35□□□□□ -1.71
C2orf88-208ENST00000490033 POMZP3Q6PJE2 187 aa4.35□□□□□ -1.71
C2orf88-208ENST00000490033 KIAA1211Q6ZU35 1233 aa4.35□□□□□ -1.71
C2orf88-208ENST00000490033 DYMQ7RTS9 669 aa4.35□□□□□ -1.71
C2orf88-208ENST00000490033 BRAPQ7Z569 592 aa4.35□□□□□ -1.71
C2orf88-208ENST00000490033 FGD2Q7Z6J4 655 aa4.35□□□□□ -1.71
C2orf88-208ENST00000490033 FBXO11Q86XK2 927 aa4.35□□□□□ -1.71
C2orf88-208ENST00000490033 NPAS3Q8IXF0 933 aa4.35□□□□□ -1.71
C2orf88-208ENST00000490033 CCDC146Q8IYE0 955 aa4.35□□□□□ -1.71
C2orf88-208ENST00000490033 ARHGEF39Q8N4T4 335 aa4.35□□□□□ -1.71
C2orf88-208ENST00000490033 SMG8Q8ND04 991 aaKnown RBP4.35□□□□□ -1.71
C2orf88-208ENST00000490033 ADCY4Q8NFM4 1077 aa4.35□□□□□ -1.71
C2orf88-208ENST00000490033 BTN2A2Q8WVV5 523 aa4.35□□□□□ -1.71
C2orf88-208ENST00000490033 VWCEQ96DN2 955 aa4.35□□□□□ -1.71
C2orf88-208ENST00000490033 C8orf48Q96LL4 319 aa4.35□□□□□ -1.71
C2orf88-208ENST00000490033 ASPSCR1Q9BZE9 553 aa4.35□□□□□ -1.71
C2orf88-208ENST00000490033 RNF208Q9H0X6 261 aa4.35□□□□□ -1.71
C2orf88-208ENST00000490033 GSX1Q9H4S2 264 aaPredicted RBP4.35□□□□□ -1.71
C2orf88-208ENST00000490033 SUGCTQ9HAC7 445 aa4.35□□□□□ -1.71
C2orf88-208ENST00000490033 PIDD1Q9HB75 910 aa4.35□□□□□ -1.71
C2orf88-208ENST00000490033 SSU72Q9NP77 194 aaKnown RBP4.35□□□□□ -1.71
C2orf88-208ENST00000490033 LRRC4BQ9NT99 713 aa4.35□□□□□ -1.71
C2orf88-208ENST00000490033 CEP131Q9UPN4 1083 aa4.35□□□□□ -1.71
C2orf88-208ENST00000490033 RIPOR2Q9Y4F9 1068 aa4.35□□□□□ -1.71
C2orf88-208ENST00000490033 TNPO3Q9Y5L0 923 aaKnown RBP4.35□□□□□ -1.71
C2orf88-208ENST00000490033 PHLDB1Q86UU1 1377 aa4.35□□□□□ -1.71
C2orf88-208ENST00000490033 COL17A1Q9UMD9 1497 aaPredicted RBP4.35□□□□□ -1.71
C2orf88-208ENST00000490033 A0A087WZG4 1122 aa4.34□□□□□ -1.71
C2orf88-208ENST00000490033 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.34□□□□□ -1.71
C2orf88-208ENST00000490033 PLEKHD1A6NEE1 506 aa4.34□□□□□ -1.71
C2orf88-208ENST00000490033 TSPAN6O43657 245 aa4.34□□□□□ -1.71
C2orf88-208ENST00000490033 OPA1O60313 960 aa4.34□□□□□ -1.71
C2orf88-208ENST00000490033 LRIG2O94898 1065 aa4.34□□□□□ -1.71
C2orf88-208ENST00000490033 KCNH1O95259 989 aa4.34□□□□□ -1.71
C2orf88-208ENST00000490033 RASGRP1O95267 797 aa4.34□□□□□ -1.71
C2orf88-208ENST00000490033 NPTXRO95502 500 aa4.34□□□□□ -1.71
C2orf88-208ENST00000490033 ASLP04424 464 aa4.34□□□□□ -1.71
C2orf88-208ENST00000490033 AMPD1P23109 780 aa4.34□□□□□ -1.71
C2orf88-208ENST00000490033 ASPAP45381 313 aa4.34□□□□□ -1.71
C2orf88-208ENST00000490033 RNF4P78317 190 aa4.34□□□□□ -1.71
C2orf88-208ENST00000490033 ZNF460Q14592 562 aa4.34□□□□□ -1.71
C2orf88-208ENST00000490033 SF1Q15637 639 aaKnown RBP4.34□□□□□ -1.71
C2orf88-208ENST00000490033 LHFPL2Q6ZUX7 228 aa4.34□□□□□ -1.71
C2orf88-208ENST00000490033 ACAD11Q709F0 780 aa4.34□□□□□ -1.71
C2orf88-208ENST00000490033 ARMCX6Q7L4S7 300 aa4.34□□□□□ -1.71
C2orf88-208ENST00000490033 NECAB2Q7Z6G3 386 aa4.34□□□□□ -1.71
C2orf88-208ENST00000490033 WDR75Q8IWA0 830 aaKnown RBP4.34□□□□□ -1.71
C2orf88-208ENST00000490033 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.34□□□□□ -1.71
C2orf88-208ENST00000490033 SMYD4Q8IYR2 804 aaPredicted RBP4.34□□□□□ -1.71
C2orf88-208ENST00000490033 CRACR2BQ8N4Y2 399 aaPredicted RBP4.34□□□□□ -1.71
C2orf88-208ENST00000490033 MFSD2AQ8NA29 543 aa4.34□□□□□ -1.71
C2orf88-208ENST00000490033 DNAJB8Q8NHS0 232 aa4.34□□□□□ -1.71
C2orf88-208ENST00000490033 WDR66Q8TBY9 1149 aa4.34□□□□□ -1.71
C2orf88-208ENST00000490033 KCTD13Q8WZ19 329 aa4.34□□□□□ -1.71
C2orf88-208ENST00000490033 BRF1Q92994 677 aa4.34□□□□□ -1.71
C2orf88-208ENST00000490033 SCLYQ96I15 445 aa4.34□□□□□ -1.71
C2orf88-208ENST00000490033 KREMEN1Q96MU8 473 aa4.34□□□□□ -1.71
C2orf88-208ENST00000490033 PSMD1Q99460 953 aa4.34□□□□□ -1.71
C2orf88-208ENST00000490033 MTFR1LQ9H019 292 aa4.34□□□□□ -1.71
C2orf88-208ENST00000490033 SLC5A4Q9NY91 659 aa4.34□□□□□ -1.71
C2orf88-208ENST00000490033 CGGBP1Q9UFW8 167 aaPredicted RBP4.34□□□□□ -1.71
C2orf88-208ENST00000490033 ACTL7BQ9Y614 415 aa4.34□□□□□ -1.71
C2orf88-208ENST00000490033 LOC102724159A0A0B4J2E5 919 aa4.33□□□□□ -1.72
C2orf88-208ENST00000490033 KRBA1A5PL33 1030 aa4.33□□□□□ -1.72
C2orf88-208ENST00000490033 GPR39O43194 453 aa4.33□□□□□ -1.72
C2orf88-208ENST00000490033 KPNA6O60684 536 aa4.33□□□□□ -1.72
C2orf88-208ENST00000490033 TIAF1O95411 115 aa4.33□□□□□ -1.72
C2orf88-208ENST00000490033 JMJD7P0C870 316 aa4.33□□□□□ -1.72
C2orf88-208ENST00000490033 HOXC12P31275 282 aa4.33□□□□□ -1.72
C2orf88-208ENST00000490033 GFRA1P56159 465 aa4.33□□□□□ -1.72
C2orf88-208ENST00000490033 ZNF445P59923 1031 aa4.33□□□□□ -1.72
C2orf88-208ENST00000490033 KRT76Q01546 638 aa4.33□□□□□ -1.72
C2orf88-208ENST00000490033 MCL1Q07820 350 aa4.33□□□□□ -1.72
C2orf88-208ENST00000490033 MTMR1Q13613 665 aa4.33□□□□□ -1.72
C2orf88-208ENST00000490033 PPP2R5AQ15172 486 aa4.33□□□□□ -1.72
C2orf88-208ENST00000490033 PWP2Q15269 919 aaKnown RBP4.33□□□□□ -1.72
C2orf88-208ENST00000490033 DHCR24Q15392 516 aa4.33□□□□□ -1.72
C2orf88-208ENST00000490033 SEPT7Q16181 437 aaKnown RBP4.33□□□□□ -1.72
C2orf88-208ENST00000490033 NTRK3Q16288 839 aa4.33□□□□□ -1.72
C2orf88-208ENST00000490033 NOL9Q5SY16 702 aaKnown RBP4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms