RNA–Protein interactions for RNA: ENST00000489816.5

BRD9-208, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,170 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-208ENST00000489816 RPS6KA4O75676 772 aa17.8■□□□□ 0.44
BRD9-208ENST00000489816 FXR1P51114 621 aaKnown RBP eCLIP17.8■□□□□ 0.44
BRD9-208ENST00000489816 TEX35Q5T0J7 233 aa17.8■□□□□ 0.44
BRD9-208ENST00000489816 USP17L2Q6R6M4 530 aa17.8■□□□□ 0.44
BRD9-208ENST00000489816 RAD9BQ6WBX8 426 aa17.8■□□□□ 0.44
BRD9-208ENST00000489816 FAM196AQ6ZSG2 479 aa17.8■□□□□ 0.44
BRD9-208ENST00000489816 CLEC10AQ8IUN9 316 aa17.8■□□□□ 0.44
BRD9-208ENST00000489816 SMAP1Q8IYB5 467 aaPredicted RBP17.8■□□□□ 0.44
BRD9-208ENST00000489816 BLIDQ8IZY5 108 aa17.8■□□□□ 0.44
BRD9-208ENST00000489816 IQUBQ8NA54 791 aa17.8■□□□□ 0.44
BRD9-208ENST00000489816 L2HGDHQ9H9P8 463 aa17.8■□□□□ 0.44
BRD9-208ENST00000489816 DDX41Q9UJV9 622 aaKnown RBP17.8■□□□□ 0.44
BRD9-208ENST00000489816 CCDC194A0A1B0GVG4 234 aa17.8■□□□□ 0.44
BRD9-208ENST00000489816 CASQ1P31415 396 aa17.8■□□□□ 0.44
BRD9-208ENST00000489816 SPATA20Q8TB22 786 aa17.8■□□□□ 0.44
BRD9-208ENST00000489816 FERMT2Q96AC1 680 aa17.8■□□□□ 0.44
BRD9-208ENST00000489816 UBA5Q9GZZ9 404 aa17.8■□□□□ 0.44
BRD9-208ENST00000489816 AKR1B15C9JRZ8 316 aaPredicted RBP17.79■□□□□ 0.44
BRD9-208ENST00000489816 ZSCAN12O43309 604 aa17.79■□□□□ 0.44
BRD9-208ENST00000489816 CCDC12Q8WUD4 166 aaPredicted RBP17.79■□□□□ 0.44
BRD9-208ENST00000489816 CCDC34Q96HJ3 373 aa17.79■□□□□ 0.44
BRD9-208ENST00000489816 NYXQ9GZU5 481 aa17.79■□□□□ 0.44
BRD9-208ENST00000489816 NID2Q14112 1375 aa17.79■□□□□ 0.44
BRD9-208ENST00000489816 STAT6P42226 847 aa17.79■□□□□ 0.44
BRD9-208ENST00000489816 PPP2R5BQ15173 497 aa17.79■□□□□ 0.44
BRD9-208ENST00000489816 CCDC93Q567U6 631 aa17.79■□□□□ 0.44
BRD9-208ENST00000489816 SLC10A5Q5PT55 438 aa17.79■□□□□ 0.44
BRD9-208ENST00000489816 C12orf60Q5U649 245 aa17.79■□□□□ 0.44
BRD9-208ENST00000489816 APTXQ7Z2E3 356 aaKnown RBP17.79■□□□□ 0.44
BRD9-208ENST00000489816 PKNOX2Q96KN3 472 aa17.79■□□□□ 0.44
BRD9-208ENST00000489816 ANKRD2Q9GZV1 360 aa17.79■□□□□ 0.44
BRD9-208ENST00000489816 OGFRQ9NZT2 677 aa17.79■□□□□ 0.44
BRD9-208ENST00000489816 ARPP21Q9UBL0 812 aaPredicted RBP17.79■□□□□ 0.44
BRD9-208ENST00000489816 TFR2Q9UP52 801 aa17.79■□□□□ 0.44
BRD9-208ENST00000489816 PARP3Q9Y6F1 533 aa17.79■□□□□ 0.44
BRD9-208ENST00000489816 ORC4O43929 436 aa17.79■□□□□ 0.44
BRD9-208ENST00000489816 CLCN6P51797 869 aa17.79■□□□□ 0.44
BRD9-208ENST00000489816 ACRBPQ8NEB7 543 aa17.79■□□□□ 0.44
BRD9-208ENST00000489816 MTA3Q9BTC8 594 aa17.79■□□□□ 0.44
BRD9-208ENST00000489816 A0A1B0GTH6 734 aa17.78■□□□□ 0.44
BRD9-208ENST00000489816 WWC2Q6AWC2 1192 aa17.78■□□□□ 0.44
BRD9-208ENST00000489816 BARGINQ6ZT62 677 aa17.78■□□□□ 0.44
BRD9-208ENST00000489816 SH3RF1Q7Z6J0 888 aa17.78■□□□□ 0.44
BRD9-208ENST00000489816 PUF60Q9UHX1 559 aaKnown RBP17.78■□□□□ 0.44
BRD9-208ENST00000489816 FGRP09769 529 aa17.78■□□□□ 0.44
BRD9-208ENST00000489816 ERCC5P28715 1186 aaPredicted RBP17.78■□□□□ 0.44
BRD9-208ENST00000489816 KIF5BP33176 963 aa17.78■□□□□ 0.44
BRD9-208ENST00000489816 RCAN1P53805 252 aa17.78■□□□□ 0.44
BRD9-208ENST00000489816 LETM2Q2VYF4 491 aa17.78■□□□□ 0.44
BRD9-208ENST00000489816 TRIML1Q8N9V2 468 aa17.78■□□□□ 0.44
BRD9-208ENST00000489816 NELFBQ8WX92 580 aa17.78■□□□□ 0.44
BRD9-208ENST00000489816 HPS3Q969F9 1004 aa17.78■□□□□ 0.44
BRD9-208ENST00000489816 ADD3Q9UEY8 706 aaKnown RBP17.78■□□□□ 0.44
BRD9-208ENST00000489816 BCORQ6W2J9 1755 aa17.78■□□□□ 0.44
BRD9-208ENST00000489816 PRCPP42785 496 aa17.77■□□□□ 0.44
BRD9-208ENST00000489816 PMS1P54277 932 aaKnown RBP17.77■□□□□ 0.44
BRD9-208ENST00000489816 PICALMQ13492 652 aa17.77■□□□□ 0.44
BRD9-208ENST00000489816 KRT31Q15323 416 aa17.77■□□□□ 0.44
BRD9-208ENST00000489816 DUOX1Q9NRD9 1551 aa17.77■□□□□ 0.44
BRD9-208ENST00000489816 PHLPP1O60346 1717 aa17.77■□□□□ 0.44
BRD9-208ENST00000489816 RIMBP2O15034 1052 aa17.77■□□□□ 0.44
BRD9-208ENST00000489816 RAD21O60216 631 aa17.77■□□□□ 0.44
BRD9-208ENST00000489816 STX10O60499 249 aa17.77■□□□□ 0.44
BRD9-208ENST00000489816 GSDMAQ96QA5 445 aa17.77■□□□□ 0.44
BRD9-208ENST00000489816 NUP88Q99567 741 aaPredicted RBP17.77■□□□□ 0.44
BRD9-208ENST00000489816 TMEM47Q9BQJ4 181 aa17.77■□□□□ 0.44
BRD9-208ENST00000489816 KCND1Q9NSA2 647 aa17.77■□□□□ 0.44
BRD9-208ENST00000489816 UFL1O94874 794 aa17.77■□□□□ 0.43
BRD9-208ENST00000489816 E2F4Q16254 413 aa17.77■□□□□ 0.43
BRD9-208ENST00000489816 FEZ1Q99689 392 aa17.77■□□□□ 0.43
BRD9-208ENST00000489816 PRDM4Q9UKN5 801 aa17.77■□□□□ 0.43
BRD9-208ENST00000489816 SYCP1Q15431 976 aa17.76■□□□□ 0.43
BRD9-208ENST00000489816 PDXDC2PQ6P474 469 aa17.76■□□□□ 0.43
BRD9-208ENST00000489816 CNBD1Q8NA66 436 aa17.76■□□□□ 0.43
BRD9-208ENST00000489816 RGS22Q8NE09 1264 aa17.76■□□□□ 0.43
BRD9-208ENST00000489816 MAD2L2Q9UI95 211 aa17.76■□□□□ 0.43
BRD9-208ENST00000489816 KLRF2D3W0D1 207 aa17.76■□□□□ 0.43
BRD9-208ENST00000489816 GYPCP04921 128 aa17.76■□□□□ 0.43
BRD9-208ENST00000489816 UBA7P41226 1012 aa17.76■□□□□ 0.43
BRD9-208ENST00000489816 FILIP1LQ4L180 1135 aa17.76■□□□□ 0.43
BRD9-208ENST00000489816 TRAPPC3LQ5T215 181 aa17.76■□□□□ 0.43
BRD9-208ENST00000489816 ZNF771Q7L3S4 317 aaPredicted RBP17.76■□□□□ 0.43
BRD9-208ENST00000489816 TIAM2Q8IVF5 1701 aa17.76■□□□□ 0.43
BRD9-208ENST00000489816 ARAP2Q8WZ64 1704 aa17.76■□□□□ 0.43
BRD9-208ENST00000489816 RPN1P04843 607 aaKnown RBP17.75■□□□□ 0.43
BRD9-208ENST00000489816 BTDP43251 543 aa17.75■□□□□ 0.43
BRD9-208ENST00000489816 JAKMIP3Q5VZ66 844 aa17.75■□□□□ 0.43
BRD9-208ENST00000489816 DTHD1Q6ZMT9 781 aa17.75■□□□□ 0.43
BRD9-208ENST00000489816 FRMPD2Q68DX3 1309 aaPredicted RBP17.75■□□□□ 0.43
BRD9-208ENST00000489816 LRRC15Q8TF66 581 aa17.75■□□□□ 0.43
BRD9-208ENST00000489816 NOL10Q9BSC4 688 aaKnown RBP17.75■□□□□ 0.43
BRD9-208ENST00000489816 C6orf229H3BNL8 230 aa17.75■□□□□ 0.43
BRD9-208ENST00000489816 SEMA3EO15041 775 aa17.75■□□□□ 0.43
BRD9-208ENST00000489816 GPSM2P81274 684 aa17.75■□□□□ 0.43
BRD9-208ENST00000489816 ZNF569Q5MCW4 686 aa17.75■□□□□ 0.43
BRD9-208ENST00000489816 BIN2Q9UBW5 565 aaPredicted RBP17.75■□□□□ 0.43
BRD9-208ENST00000489816 PCDHA4Q9UN74 947 aa17.75■□□□□ 0.43
BRD9-208ENST00000489816 NAPAP54920 295 aa17.74■□□□□ 0.43
BRD9-208ENST00000489816 UBXN1Q04323 297 aa17.74■□□□□ 0.43
BRD9-208ENST00000489816 PAK1Q13153 545 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms